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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:1458839..1459996+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_24040-T1 ID=CAN33_24040-T1|Name=CAN33_24040-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1158bp|location=Sequence derived from alignment at NKJJ01000002.1:1458839..1459996+ (Aspergillus niger FDAARGOS_311)
ATGTTCGGGGCTCTAAATCGGTTTATTGGCTTGGATGCCGAGCCTACCCG
GCAGGCGCGGGCTCAAAGCACCAGCGACAACTCGTTTGGATTCCAGGTCC
TTCGCAACAAGGATGCGGAGCTCCCTCTAGAGCCGTGGTTCGATTTCATT
GTCGGGATTAATGGGCGGTTAATAGTAAGACACTTCACTCTACAGGCAGA
CCTCTTGACATGCGCGGGTTCGACTAACTAGCTACCAGGAGGATCCCGAC
CCCAACCTCTTCGCTACGGAAGTGCGCAACTGCGCCGGATCCAGCGTGAC
CTTTGAAGTCTGGAGCGCCAAGGTACAAACATATTCCAATATCCTCCGGT
TAAATCTACTAATATCGTTGTGAAGGGTCAAAAAACACACACTGTCTCCA
TCCCCGTCCCCGCATCCAACCCCGATCTGGGCCTGGCGCTCCAACTAGCC
CCCCTCTCCTCCACCCAAAACATCTGGCACGTCCTGTCGATCCCCTCTCC
GCTCAGTCCCGCCTACCGCGCAGGCCTCCTTCCACACTCTGACTACATTA
TTGGCACTCCGAGCGGGACATTACGTGGGGAATCGGCACTTGGCGAGCTT
GTCGAAGACCACCTGAACCGCACACTAGTCCTATGGGTATACAACAGCGA
GTTTGATGTGGTGCGCGAGGTCGAGCTGGTGCCTACACGGGGCTGGGGAG
GTGAGGGGGCTCTTGGCGCAGAATTGGGCTTTGGAGCACTACACCGGTTA
CCGGTCGGCCTGGGCGAGGAAGTAGAAGGTCCAGGAGAAGTGGTCTTTGA
GATGCGGGACGATGGCTCATCCGCGCCGGTAGTGGAAGCTCTGGGCCAGG
GGCCCCCGCCGTCTGGACATTTCCTGGTCCCGGCTAACATGACCTCTCCT
CCGCCGTTGTCGGGACCTCCCAGGAATCTGGCAGCGTCGCCAGCTAGTCA
TTCGTCTGCGGGTCGGCGGCATAAGACGCGTCATACCGGGTCAGCTGCTG
CAGTGTCGTTTGATGACTACTTTGCGGAGGGCGAGCAGAAGAGCAAGGAG
CAAGACTTCGCGCCGTCCCGCAGGGGAACGCCGCTACCGCCTCCGCCCAA
GGCTGGGGTGCGGTCACCGCCTAGCTCGGGCAGTCCGGCGCCAGCGGCTG
CCGAATAG back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:1458839..1459996+ >CAN33_24040-T1 ID=CAN33_24040-T1|Name=CAN33_24040-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3123bp|location=Sequence derived from alignment at NKJJ01000002.1:1458839..1459996+ (Aspergillus niger FDAARGOS_311)
ATGTTCGGGGCTCTAAATCGGTTTATTGGCTTGGATGCCGAGCCTACCCG
GCAGGCGCGGGCTCAAAGCACCAGCGACAACTCGTTTGGATTCCAGGTCC
TTCGCAACAAGGATGCGGAGCTCCCTCTAGAGCCGTGGTTCGATTTCATT
GTCGGGATTAATGGGCGGTTAATAGAGGATCCCGACCCCAACCTCTTCGC
TACGGAAGTGCGCAACTGCGCCGGATCCAGCGTGACCTTTGAAGTCTGGA
GCGCCAAGGGTCAAAAAACACACACTGTCTCCATCCCCGTCCCCGCATCC
AACCCCGATCTGGGCCTGGCGCTCCAACTAGCCCCCCTCTCCTCCACCCA
AAACATCTGGCACGTCCTGTCGATCCCCTCTCCGCTCAGTCCCGCCTACC
GCGCAGGCCTCCTTCCACACTCTGACTACATTATTGGCACTCCGAGCGGG
ACATTACGTGGGGAATCGGCACTTGGCGAGCTTGTCGAAGACCACCTGAA
CCGCACACTAGTCCTATGGGTATACAACAGCGAGTTTGATGTGGTGCGCG
AGGTCGAGCTGGTGCCTACACGGGGCTGGGGAGGTGAGGGGGCTCTTGGC
GCAGAATTGGGCTTTGGAGCACTACACCGGTTACCGGTCGGCCTGGGCGA
GGAAGTAGAAGGTCCAGGAGAAGTGGTCTTTGAGATGCGGGACGATGGCT
CATCCGCGCCGGTAGTGGAAGCTCTGGGCCAGGGGCCCCCGCCGTCTGGA
CATTTCCTGGTCCCGGCTAACATGACCTCTCCTCCGCCGTTGTCGGGACC
TCCCAGGAATCTGGCAGCGTCGCCAGCTAGTCATTCGTCTGCGGGTCGGC
GGCATAAGACGCGTCATACCGGGTCAGCTGCTGCAGTGTCGTTTGATGAC
TACTTTGCGGAGGGCGAGCAGAAGAGCAAGGAGCAAGACTTCGCGCCGTC
CCGCAGGGGAACGCCGCTACCGCCTCCGCCCAAGGCTGGGGTGCGGTCAC
CGCCTAGCTCGGGCAGTCCGGCGCCAGCGGCTGCCGAATAGATGTTCGGG
GCTCTAAATCGGTTTATTGGCTTGGATGCCGAGCCTACCCGGCAGGCGCG
GGCTCAAAGCACCAGCGACAACTCGTTTGGATTCCAGGTCCTTCGCAACA
AGGATGCGGAGCTCCCTCTAGAGCCGTGGTTCGATTTCATTGTCGGGATT
AATGGGCGGTTAATAGAGGATCCCGACCCCAACCTCTTCGCTACGGAAGT
GCGCAACTGCGCCGGATCCAGCGTGACCTTTGAAGTCTGGAGCGCCAAGG
GTCAAAAAACACACACTGTCTCCATCCCCGTCCCCGCATCCAACCCCGAT
CTGGGCCTGGCGCTCCAACTAGCCCCCCTCTCCTCCACCCAAAACATCTG
GCACGTCCTGTCGATCCCCTCTCCGCTCAGTCCCGCCTACCGCGCAGGCC
TCCTTCCACACTCTGACTACATTATTGGCACTCCGAGCGGGACATTACGT
GGGGAATCGGCACTTGGCGAGCTTGTCGAAGACCACCTGAACCGCACACT
AGTCCTATGGGTATACAACAGCGAGTTTGATGTGGTGCGCGAGGTCGAGC
TGGTGCCTACACGGGGCTGGGGAGGTGAGGGGGCTCTTGGCGCAGAATTG
GGCTTTGGAGCACTACACCGGTTACCGGTCGGCCTGGGCGAGGAAGTAGA
AGGTCCAGGAGAAGTGGTCTTTGAGATGCGGGACGATGGCTCATCCGCGC
CGGTAGTGGAAGCTCTGGGCCAGGGGCCCCCGCCGTCTGGACATTTCCTG
GTCCCGGCTAACATGACCTCTCCTCCGCCGTTGTCGGGACCTCCCAGGAA
TCTGGCAGCGTCGCCAGCTAGTCATTCGTCTGCGGGTCGGCGGCATAAGA
CGCGTCATACCGGGTCAGCTGCTGCAGTGTCGTTTGATGACTACTTTGCG
GAGGGCGAGCAGAAGAGCAAGGAGCAAGACTTCGCGCCGTCCCGCAGGGG
AACGCCGCTACCGCCTCCGCCCAAGGCTGGGGTGCGGTCACCGCCTAGCT
CGGGCAGTCCGGCGCCAGCGGCTGCCGAATAGATGTTCGGGGCTCTAAAT
CGGTTTATTGGCTTGGATGCCGAGCCTACCCGGCAGGCGCGGGCTCAAAG
CACCAGCGACAACTCGTTTGGATTCCAGGTCCTTCGCAACAAGGATGCGG
AGCTCCCTCTAGAGCCGTGGTTCGATTTCATTGTCGGGATTAATGGGCGG
TTAATAGAGGATCCCGACCCCAACCTCTTCGCTACGGAAGTGCGCAACTG
CGCCGGATCCAGCGTGACCTTTGAAGTCTGGAGCGCCAAGGGTCAAAAAA
CACACACTGTCTCCATCCCCGTCCCCGCATCCAACCCCGATCTGGGCCTG
GCGCTCCAACTAGCCCCCCTCTCCTCCACCCAAAACATCTGGCACGTCCT
GTCGATCCCCTCTCCGCTCAGTCCCGCCTACCGCGCAGGCCTCCTTCCAC
ACTCTGACTACATTATTGGCACTCCGAGCGGGACATTACGTGGGGAATCG
GCACTTGGCGAGCTTGTCGAAGACCACCTGAACCGCACACTAGTCCTATG
GGTATACAACAGCGAGTTTGATGTGGTGCGCGAGGTCGAGCTGGTGCCTA
CACGGGGCTGGGGAGGTGAGGGGGCTCTTGGCGCAGAATTGGGCTTTGGA
GCACTACACCGGTTACCGGTCGGCCTGGGCGAGGAAGTAGAAGGTCCAGG
AGAAGTGGTCTTTGAGATGCGGGACGATGGCTCATCCGCGCCGGTAGTGG
AAGCTCTGGGCCAGGGGCCCCCGCCGTCTGGACATTTCCTGGTCCCGGCT
AACATGACCTCTCCTCCGCCGTTGTCGGGACCTCCCAGGAATCTGGCAGC
GTCGCCAGCTAGTCATTCGTCTGCGGGTCGGCGGCATAAGACGCGTCATA
CCGGGTCAGCTGCTGCAGTGTCGTTTGATGACTACTTTGCGGAGGGCGAG
CAGAAGAGCAAGGAGCAAGACTTCGCGCCGTCCCGCAGGGGAACGCCGCT
ACCGCCTCCGCCCAAGGCTGGGGTGCGGTCACCGCCTAGCTCGGGCAGTC
CGGCGCCAGCGGCTGCCGAATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000021.10 |
| Note | EggNog:ENOG41 |
| Note | BUSCO:EOG09262V9N |
| DBxref | InterPro:IPR024958 |
| DBxref | PFAM:PF04495 |
| Product | GRASP55/65 PDZ-like domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:1458839..1459996 + |
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