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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:1523895..1526151- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_24160-T1 ID=CAN33_24160-T1|Name=CAN33_24160-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2257bp|location=Sequence derived from alignment at NKJJ01000002.1:1523895..1526151- (Aspergillus niger FDAARGOS_311) ATGGTTTCCAGCCTTTTCCTTACTCTCGCTACCTTCGCATCGGCCTATGC
CCTCGCCGTCAATAAGAGATTTGATAATGGCGACTTCCCAACTGGTGACA
CCGACCCCAATGTTACGAGTGCATGTACGTACTGGGCGAATTCCATTAGC
TCAACAGATACATGTGCGGACCTTGAGAGCTACTATGGCATTACGTCCAC
ACAGCTAACTTCCTGGGTAACATTACCTTCTTCTTATCCTGAATATGGTT
GGGACTGATGTATTAAAGAACCCTTCTCTTTCAACTACCAGCTGTGCTCT
CCAAGAGGGCTGGAGCTACTGTGTTAGCGCGCCAGCTGTATCAACCACAG
CCTCATCCACCAGCACTGTGTCCACGGTCTCTTCCTCGCTCCTGTCTACT
ACTACGGCGGCACCTGCTCCAGGTACGACCACCGGCGCGGGTAGCCCTTC
CCCGACGCAAGGCGGCCTGAGCTCGAGCTGTGACGCGTTTTACTACGTTG
AAGCCGGTGATTCATGCTGGGCAATTGTTAACTCGTACGGCAACTTTACG
CTAAATCAATTCTACTCCTGGAATCCGTGAGTGCCCACCAATTAATTTAC
ACTGTTTCCTTCAGCGGTTGAACAGAAGCACAGGGCCGTGAAGTCCGACT
GCTCCGGCCTACAACCGGACTATTATGTCTGTATCGGTGTCGCCGGAGAT
ACCACAGTAGCCTCGCAGACGACGCTTCCTGCTACCACTACTGCCTCAGC
GGCTACATCTACTGGGTCTTACCTGCCTGAGCAGACGGGAATCGCATCTA
ACTGTATAACTCTCTATATGAATCATCCCCGCTGACGGTCGAACTAATGC
TAGCCAGGCGATAAATATTACTATGTTCAACACGGGGACACTTGCTCTGA
CATCGCTACCAACCACGACATCAGCCTAAACGACTTCTACTCCTGGAACC
CAGCTGTAGGAACAACCTGTAGTGACCTGGAGGCTGACTATTGGGTCTGC
GTTGGTGTTTCTGGTGAGTATGCCCTGAGCACCTACAACTACTTTCTCCA
TGTAGAGCTCTATTCAAGGCAAACTAATGAACTCCAGGTGGTGCCACCGC
AACCACCACAACATCTACCTCCACATCAACATCAACTGTGAGCAGCACAA
CACCCACCAGCAACGCTCCATCTCCAACCCAATCGGGTCTAGTAGGTGAC
TGTTCCACCTACTACGAAGCCAAATCCGGAGACAGCTGCTGGTTCATTGT
CAACGACAAATACACCTACCTAACGACCTCCCTCTTCGAAGAATGGAACC
CCGCCGTCGGATCAGACTGCAGTAACCTGCAACCGGGATACTATTACTGT
GTGGCCACGCAGAAGCAGGCGCCAATGCCCGACACGATCGATACATGCAA
GAAGTGGCACTTGGTAGCGGACGGGGATAATTGCTGGTCAATAGAGCAGG
ACGCAGGTGTTACTGCGAGTCAGTTCAATATGTGGAATCCGTACGTGGGT
TCTTCTTGTGCAAATTTGTGGTTGGGGTATTGGGTTTGTGTGGGTGTTTG
ATAGGTCTTAGGGCGGGGGCGGTATGGGGGTTTAGAGAAGACCTTGTTGC
CCTTATTAGCCCAGAGTCAATAGTTATTTCAAGGTCTTGCAAGGGTGGGG
GATCCATGGCCCGGAGTGAATTAACTTTCTGCAACGTGGGCGATAACTGC
AGAGAAAAGATGAGGGTAACGACGGTGAGATCCAGAAGGCTTACAAACAA
CGTGCAATAGCCACCGCAATCTATATGTTGGCGTCAAAGAGTGGTAGACC
AGTTCTCGCTGAAAAATGAATAAGAAACAAAAACATACAACAGAAGGGAT
TCGCTGGTGGTCACCCACCCAACTACTAACCTCCCGGCGTGTGGCTTAAG
TACGGCTGAGCGGACGGGAAGCCCTGTTTTCCACACCCTATGGTCGTATG
TATCCGGTGTTTCTGTCCTACACTTCATAAGGACAGGATGTTATAAGGTA
ACATACCCTTCCTGGGCTGCAATACCAAGGCTTGTTGGGGATCCAGTCTA
ACAAAGCTCAATCTAGTCCATGACACTCTGTCTACGATTGCTCTGTTGCA
ACTACACATGTTTGGGTCGTTGGCATAGCGGAATAGACATGTTCATTCCA
GTAAACAGTAATCTCTTGGAACTACTTGTCACTAATACATGGATAGTTTG
CTGAAACGCTCCATCCAGATAGTTGTCGTGAGCTACGTTGGGTATTCGGT
CCTCTAA back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:1523895..1526151- >CAN33_24160-T1 ID=CAN33_24160-T1|Name=CAN33_24160-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=7884bp|location=Sequence derived from alignment at NKJJ01000002.1:1523895..1526151- (Aspergillus niger FDAARGOS_311) TTTGCTGAAACGCTCCATCCAGATAGTTGTCGTGAGCTACGTTGGGTATT CGGTCCTCTAAGTGGTGCCACCGCAACCACCACAACATCTACCTCCACAT CAACATCAACTGTGAGCAGCACAACACCCACCAGCAACGCTCCATCTCCA ACCCAATCGGGTCTAGTAGGTGACTGTTCCACCTACTACGAAGCCAAATC CGGAGACAGCTGCTGGTTCATTGTCAACGACAAATACACCTACCTAACGA CCTCCCTCTTCGAAGAATGGAACCCCGCCGTCGGATCAGACTGCAGTAAC CTGCAACCGGGATACTATTACTGTGTGGCCACGCAGAAGCAGGCGCCAAT GCCCGACACGATCGATACATGCAAGAAGTGGCACTTGGTAGCGGACGGGG ATAATTGCTGGTCAATAGAGCAGGACGCAGGTGTTACTGCGAGTCAGTTC AATATGTGGAATCCGCGATAAATATTACTATGTTCAACACGGGGACACTT GCTCTGACATCGCTACCAACCACGACATCAGCCTAAACGACTTCTACTCC TGGAACCCAGCTGTAGGAACAACCTGTAGTGACCTGGAGGCTGACTATTG GGTCTGCGTTGGTGTTTCTGGGCCGTGAAGTCCGACTGCTCCGGCCTACA ACCGGACTATTATGTCTGTATCGGTGTCGCCGGAGATACCACAGTAGCCT CGCAGACGACGCTTCCTGCTACCACTACTGCCTCAGCGGCTACATCTACT GGGTCTTACCTGCCTGAGCAGACGGGAATCGCATCTAACTAACCCTTCTC TTTCAACTACCAGCTGTGCTCTCCAAGAGGGCTGGAGCTACTGTGTTAGC GCGCCAGCTGTATCAACCACAGCCTCATCCACCAGCACTGTGTCCACGGT CTCTTCCTCGCTCCTGTCTACTACTACGGCGGCACCTGCTCCAGGTACGA CCACCGGCGCGGGTAGCCCTTCCCCGACGCAAGGCGGCCTGAGCTCGAGC TGTGACGCGTTTTACTACGTTGAAGCCGGTGATTCATGCTGGGCAATTGT TAACTCGTACGGCAACTTTACGCTAAATCAATTCTACTCCTGGAATCCAT GGTTTCCAGCCTTTTCCTTACTCTCGCTACCTTCGCATCGGCCTATGCCC TCGCCGTCAATAAGAGATTTGATAATGGCGACTTCCCAACTGGTGACACC GACCCCAATGTTACGAGTGCATGTACGTACTGGGCGAATTCCATTAGCTC AACAGATACATGTGCGGACCTTGAGAGCTACTATGGCATTACGTCCACAC AGCTAACTTCCTGGTTTGCTGAAACGCTCCATCCAGATAGTTGTCGTGAG CTACGTTGGGTATTCGGTCCTCTAAGTGGTGCCACCGCAACCACCACAAC ATCTACCTCCACATCAACATCAACTGTGAGCAGCACAACACCCACCAGCA ACGCTCCATCTCCAACCCAATCGGGTCTAGTAGGTGACTGTTCCACCTAC TACGAAGCCAAATCCGGAGACAGCTGCTGGTTCATTGTCAACGACAAATA CACCTACCTAACGACCTCCCTCTTCGAAGAATGGAACCCCGCCGTCGGAT CAGACTGCAGTAACCTGCAACCGGGATACTATTACTGTGTGGCCACGCAG AAGCAGGCGCCAATGCCCGACACGATCGATACATGCAAGAAGTGGCACTT GGTAGCGGACGGGGATAATTGCTGGTCAATAGAGCAGGACGCAGGTGTTA CTGCGAGTCAGTTCAATATGTGGAATCCGCGATAAATATTACTATGTTCA ACACGGGGACACTTGCTCTGACATCGCTACCAACCACGACATCAGCCTAA ACGACTTCTACTCCTGGAACCCAGCTGTAGGAACAACCTGTAGTGACCTG GAGGCTGACTATTGGGTCTGCGTTGGTGTTTCTGGGCCGTGAAGTCCGAC TGCTCCGGCCTACAACCGGACTATTATGTCTGTATCGGTGTCGCCGGAGA TACCACAGTAGCCTCGCAGACGACGCTTCCTGCTACCACTACTGCCTCAG CGGCTACATCTACTGGGTCTTACCTGCCTGAGCAGACGGGAATCGCATCT AACTAACCCTTCTCTTTCAACTACCAGCTGTGCTCTCCAAGAGGGCTGGA GCTACTGTGTTAGCGCGCCAGCTGTATCAACCACAGCCTCATCCACCAGC ACTGTGTCCACGGTCTCTTCCTCGCTCCTGTCTACTACTACGGCGGCACC TGCTCCAGGTACGACCACCGGCGCGGGTAGCCCTTCCCCGACGCAAGGCG GCCTGAGCTCGAGCTGTGACGCGTTTTACTACGTTGAAGCCGGTGATTCA TGCTGGGCAATTGTTAACTCGTACGGCAACTTTACGCTAAATCAATTCTA CTCCTGGAATCCATGGTTTCCAGCCTTTTCCTTACTCTCGCTACCTTCGC ATCGGCCTATGCCCTCGCCGTCAATAAGAGATTTGATAATGGCGACTTCC CAACTGGTGACACCGACCCCAATGTTACGAGTGCATGTACGTACTGGGCG AATTCCATTAGCTCAACAGATACATGTGCGGACCTTGAGAGCTACTATGG CATTACGTCCACACAGCTAACTTCCTGGTTTGCTGAAACGCTCCATCCAG ATAGTTGTCGTGAGCTACGTTGGGTATTCGGTCCTCTAAGTGGTGCCACC GCAACCACCACAACATCTACCTCCACATCAACATCAACTGTGAGCAGCAC AACACCCACCAGCAACGCTCCATCTCCAACCCAATCGGGTCTAGTAGGTG ACTGTTCCACCTACTACGAAGCCAAATCCGGAGACAGCTGCTGGTTCATT GTCAACGACAAATACACCTACCTAACGACCTCCCTCTTCGAAGAATGGAA CCCCGCCGTCGGATCAGACTGCAGTAACCTGCAACCGGGATACTATTACT GTGTGGCCACGCAGAAGCAGGCGCCAATGCCCGACACGATCGATACATGC AAGAAGTGGCACTTGGTAGCGGACGGGGATAATTGCTGGTCAATAGAGCA GGACGCAGGTGTTACTGCGAGTCAGTTCAATATGTGGAATCCGCGATAAA TATTACTATGTTCAACACGGGGACACTTGCTCTGACATCGCTACCAACCA CGACATCAGCCTAAACGACTTCTACTCCTGGAACCCAGCTGTAGGAACAA CCTGTAGTGACCTGGAGGCTGACTATTGGGTCTGCGTTGGTGTTTCTGGG CCGTGAAGTCCGACTGCTCCGGCCTACAACCGGACTATTATGTCTGTATC GGTGTCGCCGGAGATACCACAGTAGCCTCGCAGACGACGCTTCCTGCTAC CACTACTGCCTCAGCGGCTACATCTACTGGGTCTTACCTGCCTGAGCAGA CGGGAATCGCATCTAACTAACCCTTCTCTTTCAACTACCAGCTGTGCTCT CCAAGAGGGCTGGAGCTACTGTGTTAGCGCGCCAGCTGTATCAACCACAG CCTCATCCACCAGCACTGTGTCCACGGTCTCTTCCTCGCTCCTGTCTACT ACTACGGCGGCACCTGCTCCAGGTACGACCACCGGCGCGGGTAGCCCTTC CCCGACGCAAGGCGGCCTGAGCTCGAGCTGTGACGCGTTTTACTACGTTG AAGCCGGTGATTCATGCTGGGCAATTGTTAACTCGTACGGCAACTTTACG CTAAATCAATTCTACTCCTGGAATCCATGGTTTCCAGCCTTTTCCTTACT CTCGCTACCTTCGCATCGGCCTATGCCCTCGCCGTCAATAAGAGATTTGA TAATGGCGACTTCCCAACTGGTGACACCGACCCCAATGTTACGAGTGCAT GTACGTACTGGGCGAATTCCATTAGCTCAACAGATACATGTGCGGACCTT GAGAGCTACTATGGCATTACGTCCACACAGCTAACTTCCTGGTTTGCTGA AACGCTCCATCCAGATAGTTGTCGTGAGCTACGTTGGGTATTCGGTCCTC TAAGTGGTGCCACCGCAACCACCACAACATCTACCTCCACATCAACATCA ACTGTGAGCAGCACAACACCCACCAGCAACGCTCCATCTCCAACCCAATC GGGTCTAGTAGGTGACTGTTCCACCTACTACGAAGCCAAATCCGGAGACA GCTGCTGGTTCATTGTCAACGACAAATACACCTACCTAACGACCTCCCTC TTCGAAGAATGGAACCCCGCCGTCGGATCAGACTGCAGTAACCTGCAACC GGGATACTATTACTGTGTGGCCACGCAGAAGCAGGCGCCAATGCCCGACA CGATCGATACATGCAAGAAGTGGCACTTGGTAGCGGACGGGGATAATTGC TGGTCAATAGAGCAGGACGCAGGTGTTACTGCGAGTCAGTTCAATATGTG GAATCCGCGATAAATATTACTATGTTCAACACGGGGACACTTGCTCTGAC ATCGCTACCAACCACGACATCAGCCTAAACGACTTCTACTCCTGGAACCC AGCTGTAGGAACAACCTGTAGTGACCTGGAGGCTGACTATTGGGTCTGCG TTGGTGTTTCTGGGCCGTGAAGTCCGACTGCTCCGGCCTACAACCGGACT ATTATGTCTGTATCGGTGTCGCCGGAGATACCACAGTAGCCTCGCAGACG ACGCTTCCTGCTACCACTACTGCCTCAGCGGCTACATCTACTGGGTCTTA CCTGCCTGAGCAGACGGGAATCGCATCTAACTAACCCTTCTCTTTCAACT ACCAGCTGTGCTCTCCAAGAGGGCTGGAGCTACTGTGTTAGCGCGCCAGC TGTATCAACCACAGCCTCATCCACCAGCACTGTGTCCACGGTCTCTTCCT CGCTCCTGTCTACTACTACGGCGGCACCTGCTCCAGGTACGACCACCGGC GCGGGTAGCCCTTCCCCGACGCAAGGCGGCCTGAGCTCGAGCTGTGACGC GTTTTACTACGTTGAAGCCGGTGATTCATGCTGGGCAATTGTTAACTCGT ACGGCAACTTTACGCTAAATCAATTCTACTCCTGGAATCCATGGTTTCCA GCCTTTTCCTTACTCTCGCTACCTTCGCATCGGCCTATGCCCTCGCCGTC AATAAGAGATTTGATAATGGCGACTTCCCAACTGGTGACACCGACCCCAA TGTTACGAGTGCATGTACGTACTGGGCGAATTCCATTAGCTCAACAGATA CATGTGCGGACCTTGAGAGCTACTATGGCATTACGTCCACACAGCTAACT TCCTGGTTTGCTGAAACGCTCCATCCAGATAGTTGTCGTGAGCTACGTTG GGTATTCGGTCCTCTAAGTGGTGCCACCGCAACCACCACAACATCTACCT CCACATCAACATCAACTGTGAGCAGCACAACACCCACCAGCAACGCTCCA TCTCCAACCCAATCGGGTCTAGTAGGTGACTGTTCCACCTACTACGAAGC CAAATCCGGAGACAGCTGCTGGTTCATTGTCAACGACAAATACACCTACC TAACGACCTCCCTCTTCGAAGAATGGAACCCCGCCGTCGGATCAGACTGC AGTAACCTGCAACCGGGATACTATTACTGTGTGGCCACGCAGAAGCAGGC GCCAATGCCCGACACGATCGATACATGCAAGAAGTGGCACTTGGTAGCGG ACGGGGATAATTGCTGGTCAATAGAGCAGGACGCAGGTGTTACTGCGAGT CAGTTCAATATGTGGAATCCGCGATAAATATTACTATGTTCAACACGGGG ACACTTGCTCTGACATCGCTACCAACCACGACATCAGCCTAAACGACTTC TACTCCTGGAACCCAGCTGTAGGAACAACCTGTAGTGACCTGGAGGCTGA CTATTGGGTCTGCGTTGGTGTTTCTGGGCCGTGAAGTCCGACTGCTCCGG CCTACAACCGGACTATTATGTCTGTATCGGTGTCGCCGGAGATACCACAG TAGCCTCGCAGACGACGCTTCCTGCTACCACTACTGCCTCAGCGGCTACA TCTACTGGGTCTTACCTGCCTGAGCAGACGGGAATCGCATCTAACTAACC CTTCTCTTTCAACTACCAGCTGTGCTCTCCAAGAGGGCTGGAGCTACTGT GTTAGCGCGCCAGCTGTATCAACCACAGCCTCATCCACCAGCACTGTGTC CACGGTCTCTTCCTCGCTCCTGTCTACTACTACGGCGGCACCTGCTCCAG GTACGACCACCGGCGCGGGTAGCCCTTCCCCGACGCAAGGCGGCCTGAGC TCGAGCTGTGACGCGTTTTACTACGTTGAAGCCGGTGATTCATGCTGGGC AATTGTTAACTCGTACGGCAACTTTACGCTAAATCAATTCTACTCCTGGA ATCCATGGTTTCCAGCCTTTTCCTTACTCTCGCTACCTTCGCATCGGCCT ATGCCCTCGCCGTCAATAAGAGATTTGATAATGGCGACTTCCCAACTGGT GACACCGACCCCAATGTTACGAGTGCATGTACGTACTGGGCGAATTCCAT TAGCTCAACAGATACATGTGCGGACCTTGAGAGCTACTATGGCATTACGT CCACACAGCTAACTTCCTGGTTTGCTGAAACGCTCCATCCAGATAGTTGT CGTGAGCTACGTTGGGTATTCGGTCCTCTAAGTGGTGCCACCGCAACCAC CACAACATCTACCTCCACATCAACATCAACTGTGAGCAGCACAACACCCA CCAGCAACGCTCCATCTCCAACCCAATCGGGTCTAGTAGGTGACTGTTCC ACCTACTACGAAGCCAAATCCGGAGACAGCTGCTGGTTCATTGTCAACGA CAAATACACCTACCTAACGACCTCCCTCTTCGAAGAATGGAACCCCGCCG TCGGATCAGACTGCAGTAACCTGCAACCGGGATACTATTACTGTGTGGCC ACGCAGAAGCAGGCGCCAATGCCCGACACGATCGATACATGCAAGAAGTG GCACTTGGTAGCGGACGGGGATAATTGCTGGTCAATAGAGCAGGACGCAG GTGTTACTGCGAGTCAGTTCAATATGTGGAATCCGCGATAAATATTACTA TGTTCAACACGGGGACACTTGCTCTGACATCGCTACCAACCACGACATCA GCCTAAACGACTTCTACTCCTGGAACCCAGCTGTAGGAACAACCTGTAGT GACCTGGAGGCTGACTATTGGGTCTGCGTTGGTGTTTCTGGGCCGTGAAG TCCGACTGCTCCGGCCTACAACCGGACTATTATGTCTGTATCGGTGTCGC CGGAGATACCACAGTAGCCTCGCAGACGACGCTTCCTGCTACCACTACTG CCTCAGCGGCTACATCTACTGGGTCTTACCTGCCTGAGCAGACGGGAATC GCATCTAACTAACCCTTCTCTTTCAACTACCAGCTGTGCTCTCCAAGAGG GCTGGAGCTACTGTGTTAGCGCGCCAGCTGTATCAACCACAGCCTCATCC ACCAGCACTGTGTCCACGGTCTCTTCCTCGCTCCTGTCTACTACTACGGC GGCACCTGCTCCAGGTACGACCACCGGCGCGGGTAGCCCTTCCCCGACGC AAGGCGGCCTGAGCTCGAGCTGTGACGCGTTTTACTACGTTGAAGCCGGT GATTCATGCTGGGCAATTGTTAACTCGTACGGCAACTTTACGCTAAATCA ATTCTACTCCTGGAATCCATGGTTTCCAGCCTTTTCCTTACTCTCGCTAC CTTCGCATCGGCCTATGCCCTCGCCGTCAATAAGAGATTTGATAATGGCG ACTTCCCAACTGGTGACACCGACCCCAATGTTACGAGTGCATGTACGTAC TGGGCGAATTCCATTAGCTCAACAGATACATGTGCGGACCTTGAGAGCTA CTATGGCATTACGTCCACACAGCTAACTTCCTGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
| Note | EggNog:ENOG41 |
| Note | SECRETED:SignalP(1-17) |
| Note | CAZy:CBM50 |
| DBxref | InterPro:IPR036779 |
| DBxref | InterPro:IPR018392 |
| DBxref | PFAM:PF01476 |
| Product | LysM domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:1523895..1526151 - |
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