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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:1523895..1526151- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_24160-T1 ID=CAN33_24160-T1|Name=CAN33_24160-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2257bp|location=Sequence derived from alignment at NKJJ01000002.1:1523895..1526151- (Aspergillus niger FDAARGOS_311)
ATGGTTTCCAGCCTTTTCCTTACTCTCGCTACCTTCGCATCGGCCTATGC
CCTCGCCGTCAATAAGAGATTTGATAATGGCGACTTCCCAACTGGTGACA
CCGACCCCAATGTTACGAGTGCATGTACGTACTGGGCGAATTCCATTAGC
TCAACAGATACATGTGCGGACCTTGAGAGCTACTATGGCATTACGTCCAC
ACAGCTAACTTCCTGGGTAACATTACCTTCTTCTTATCCTGAATATGGTT
GGGACTGATGTATTAAAGAACCCTTCTCTTTCAACTACCAGCTGTGCTCT
CCAAGAGGGCTGGAGCTACTGTGTTAGCGCGCCAGCTGTATCAACCACAG
CCTCATCCACCAGCACTGTGTCCACGGTCTCTTCCTCGCTCCTGTCTACT
ACTACGGCGGCACCTGCTCCAGGTACGACCACCGGCGCGGGTAGCCCTTC
CCCGACGCAAGGCGGCCTGAGCTCGAGCTGTGACGCGTTTTACTACGTTG
AAGCCGGTGATTCATGCTGGGCAATTGTTAACTCGTACGGCAACTTTACG
CTAAATCAATTCTACTCCTGGAATCCGTGAGTGCCCACCAATTAATTTAC
ACTGTTTCCTTCAGCGGTTGAACAGAAGCACAGGGCCGTGAAGTCCGACT
GCTCCGGCCTACAACCGGACTATTATGTCTGTATCGGTGTCGCCGGAGAT
ACCACAGTAGCCTCGCAGACGACGCTTCCTGCTACCACTACTGCCTCAGC
GGCTACATCTACTGGGTCTTACCTGCCTGAGCAGACGGGAATCGCATCTA
ACTGTATAACTCTCTATATGAATCATCCCCGCTGACGGTCGAACTAATGC
TAGCCAGGCGATAAATATTACTATGTTCAACACGGGGACACTTGCTCTGA
CATCGCTACCAACCACGACATCAGCCTAAACGACTTCTACTCCTGGAACC
CAGCTGTAGGAACAACCTGTAGTGACCTGGAGGCTGACTATTGGGTCTGC
GTTGGTGTTTCTGGTGAGTATGCCCTGAGCACCTACAACTACTTTCTCCA
TGTAGAGCTCTATTCAAGGCAAACTAATGAACTCCAGGTGGTGCCACCGC
AACCACCACAACATCTACCTCCACATCAACATCAACTGTGAGCAGCACAA
CACCCACCAGCAACGCTCCATCTCCAACCCAATCGGGTCTAGTAGGTGAC
TGTTCCACCTACTACGAAGCCAAATCCGGAGACAGCTGCTGGTTCATTGT
CAACGACAAATACACCTACCTAACGACCTCCCTCTTCGAAGAATGGAACC
CCGCCGTCGGATCAGACTGCAGTAACCTGCAACCGGGATACTATTACTGT
GTGGCCACGCAGAAGCAGGCGCCAATGCCCGACACGATCGATACATGCAA
GAAGTGGCACTTGGTAGCGGACGGGGATAATTGCTGGTCAATAGAGCAGG
ACGCAGGTGTTACTGCGAGTCAGTTCAATATGTGGAATCCGTACGTGGGT
TCTTCTTGTGCAAATTTGTGGTTGGGGTATTGGGTTTGTGTGGGTGTTTG
ATAGGTCTTAGGGCGGGGGCGGTATGGGGGTTTAGAGAAGACCTTGTTGC
CCTTATTAGCCCAGAGTCAATAGTTATTTCAAGGTCTTGCAAGGGTGGGG
GATCCATGGCCCGGAGTGAATTAACTTTCTGCAACGTGGGCGATAACTGC
AGAGAAAAGATGAGGGTAACGACGGTGAGATCCAGAAGGCTTACAAACAA
CGTGCAATAGCCACCGCAATCTATATGTTGGCGTCAAAGAGTGGTAGACC
AGTTCTCGCTGAAAAATGAATAAGAAACAAAAACATACAACAGAAGGGAT
TCGCTGGTGGTCACCCACCCAACTACTAACCTCCCGGCGTGTGGCTTAAG
TACGGCTGAGCGGACGGGAAGCCCTGTTTTCCACACCCTATGGTCGTATG
TATCCGGTGTTTCTGTCCTACACTTCATAAGGACAGGATGTTATAAGGTA
ACATACCCTTCCTGGGCTGCAATACCAAGGCTTGTTGGGGATCCAGTCTA
ACAAAGCTCAATCTAGTCCATGACACTCTGTCTACGATTGCTCTGTTGCA
ACTACACATGTTTGGGTCGTTGGCATAGCGGAATAGACATGTTCATTCCA
GTAAACAGTAATCTCTTGGAACTACTTGTCACTAATACATGGATAGTTTG
CTGAAACGCTCCATCCAGATAGTTGTCGTGAGCTACGTTGGGTATTCGGT
CCTCTAA back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:1523895..1526151- >CAN33_24160-T1 ID=CAN33_24160-T1|Name=CAN33_24160-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=7884bp|location=Sequence derived from alignment at NKJJ01000002.1:1523895..1526151- (Aspergillus niger FDAARGOS_311)
TTTGCTGAAACGCTCCATCCAGATAGTTGTCGTGAGCTACGTTGGGTATT
CGGTCCTCTAAGTGGTGCCACCGCAACCACCACAACATCTACCTCCACAT
CAACATCAACTGTGAGCAGCACAACACCCACCAGCAACGCTCCATCTCCA
ACCCAATCGGGTCTAGTAGGTGACTGTTCCACCTACTACGAAGCCAAATC
CGGAGACAGCTGCTGGTTCATTGTCAACGACAAATACACCTACCTAACGA
CCTCCCTCTTCGAAGAATGGAACCCCGCCGTCGGATCAGACTGCAGTAAC
CTGCAACCGGGATACTATTACTGTGTGGCCACGCAGAAGCAGGCGCCAAT
GCCCGACACGATCGATACATGCAAGAAGTGGCACTTGGTAGCGGACGGGG
ATAATTGCTGGTCAATAGAGCAGGACGCAGGTGTTACTGCGAGTCAGTTC
AATATGTGGAATCCGCGATAAATATTACTATGTTCAACACGGGGACACTT
GCTCTGACATCGCTACCAACCACGACATCAGCCTAAACGACTTCTACTCC
TGGAACCCAGCTGTAGGAACAACCTGTAGTGACCTGGAGGCTGACTATTG
GGTCTGCGTTGGTGTTTCTGGGCCGTGAAGTCCGACTGCTCCGGCCTACA
ACCGGACTATTATGTCTGTATCGGTGTCGCCGGAGATACCACAGTAGCCT
CGCAGACGACGCTTCCTGCTACCACTACTGCCTCAGCGGCTACATCTACT
GGGTCTTACCTGCCTGAGCAGACGGGAATCGCATCTAACTAACCCTTCTC
TTTCAACTACCAGCTGTGCTCTCCAAGAGGGCTGGAGCTACTGTGTTAGC
GCGCCAGCTGTATCAACCACAGCCTCATCCACCAGCACTGTGTCCACGGT
CTCTTCCTCGCTCCTGTCTACTACTACGGCGGCACCTGCTCCAGGTACGA
CCACCGGCGCGGGTAGCCCTTCCCCGACGCAAGGCGGCCTGAGCTCGAGC
TGTGACGCGTTTTACTACGTTGAAGCCGGTGATTCATGCTGGGCAATTGT
TAACTCGTACGGCAACTTTACGCTAAATCAATTCTACTCCTGGAATCCAT
GGTTTCCAGCCTTTTCCTTACTCTCGCTACCTTCGCATCGGCCTATGCCC
TCGCCGTCAATAAGAGATTTGATAATGGCGACTTCCCAACTGGTGACACC
GACCCCAATGTTACGAGTGCATGTACGTACTGGGCGAATTCCATTAGCTC
AACAGATACATGTGCGGACCTTGAGAGCTACTATGGCATTACGTCCACAC
AGCTAACTTCCTGGTTTGCTGAAACGCTCCATCCAGATAGTTGTCGTGAG
CTACGTTGGGTATTCGGTCCTCTAAGTGGTGCCACCGCAACCACCACAAC
ATCTACCTCCACATCAACATCAACTGTGAGCAGCACAACACCCACCAGCA
ACGCTCCATCTCCAACCCAATCGGGTCTAGTAGGTGACTGTTCCACCTAC
TACGAAGCCAAATCCGGAGACAGCTGCTGGTTCATTGTCAACGACAAATA
CACCTACCTAACGACCTCCCTCTTCGAAGAATGGAACCCCGCCGTCGGAT
CAGACTGCAGTAACCTGCAACCGGGATACTATTACTGTGTGGCCACGCAG
AAGCAGGCGCCAATGCCCGACACGATCGATACATGCAAGAAGTGGCACTT
GGTAGCGGACGGGGATAATTGCTGGTCAATAGAGCAGGACGCAGGTGTTA
CTGCGAGTCAGTTCAATATGTGGAATCCGCGATAAATATTACTATGTTCA
ACACGGGGACACTTGCTCTGACATCGCTACCAACCACGACATCAGCCTAA
ACGACTTCTACTCCTGGAACCCAGCTGTAGGAACAACCTGTAGTGACCTG
GAGGCTGACTATTGGGTCTGCGTTGGTGTTTCTGGGCCGTGAAGTCCGAC
TGCTCCGGCCTACAACCGGACTATTATGTCTGTATCGGTGTCGCCGGAGA
TACCACAGTAGCCTCGCAGACGACGCTTCCTGCTACCACTACTGCCTCAG
CGGCTACATCTACTGGGTCTTACCTGCCTGAGCAGACGGGAATCGCATCT
AACTAACCCTTCTCTTTCAACTACCAGCTGTGCTCTCCAAGAGGGCTGGA
GCTACTGTGTTAGCGCGCCAGCTGTATCAACCACAGCCTCATCCACCAGC
ACTGTGTCCACGGTCTCTTCCTCGCTCCTGTCTACTACTACGGCGGCACC
TGCTCCAGGTACGACCACCGGCGCGGGTAGCCCTTCCCCGACGCAAGGCG
GCCTGAGCTCGAGCTGTGACGCGTTTTACTACGTTGAAGCCGGTGATTCA
TGCTGGGCAATTGTTAACTCGTACGGCAACTTTACGCTAAATCAATTCTA
CTCCTGGAATCCATGGTTTCCAGCCTTTTCCTTACTCTCGCTACCTTCGC
ATCGGCCTATGCCCTCGCCGTCAATAAGAGATTTGATAATGGCGACTTCC
CAACTGGTGACACCGACCCCAATGTTACGAGTGCATGTACGTACTGGGCG
AATTCCATTAGCTCAACAGATACATGTGCGGACCTTGAGAGCTACTATGG
CATTACGTCCACACAGCTAACTTCCTGGTTTGCTGAAACGCTCCATCCAG
ATAGTTGTCGTGAGCTACGTTGGGTATTCGGTCCTCTAAGTGGTGCCACC
GCAACCACCACAACATCTACCTCCACATCAACATCAACTGTGAGCAGCAC
AACACCCACCAGCAACGCTCCATCTCCAACCCAATCGGGTCTAGTAGGTG
ACTGTTCCACCTACTACGAAGCCAAATCCGGAGACAGCTGCTGGTTCATT
GTCAACGACAAATACACCTACCTAACGACCTCCCTCTTCGAAGAATGGAA
CCCCGCCGTCGGATCAGACTGCAGTAACCTGCAACCGGGATACTATTACT
GTGTGGCCACGCAGAAGCAGGCGCCAATGCCCGACACGATCGATACATGC
AAGAAGTGGCACTTGGTAGCGGACGGGGATAATTGCTGGTCAATAGAGCA
GGACGCAGGTGTTACTGCGAGTCAGTTCAATATGTGGAATCCGCGATAAA
TATTACTATGTTCAACACGGGGACACTTGCTCTGACATCGCTACCAACCA
CGACATCAGCCTAAACGACTTCTACTCCTGGAACCCAGCTGTAGGAACAA
CCTGTAGTGACCTGGAGGCTGACTATTGGGTCTGCGTTGGTGTTTCTGGG
CCGTGAAGTCCGACTGCTCCGGCCTACAACCGGACTATTATGTCTGTATC
GGTGTCGCCGGAGATACCACAGTAGCCTCGCAGACGACGCTTCCTGCTAC
CACTACTGCCTCAGCGGCTACATCTACTGGGTCTTACCTGCCTGAGCAGA
CGGGAATCGCATCTAACTAACCCTTCTCTTTCAACTACCAGCTGTGCTCT
CCAAGAGGGCTGGAGCTACTGTGTTAGCGCGCCAGCTGTATCAACCACAG
CCTCATCCACCAGCACTGTGTCCACGGTCTCTTCCTCGCTCCTGTCTACT
ACTACGGCGGCACCTGCTCCAGGTACGACCACCGGCGCGGGTAGCCCTTC
CCCGACGCAAGGCGGCCTGAGCTCGAGCTGTGACGCGTTTTACTACGTTG
AAGCCGGTGATTCATGCTGGGCAATTGTTAACTCGTACGGCAACTTTACG
CTAAATCAATTCTACTCCTGGAATCCATGGTTTCCAGCCTTTTCCTTACT
CTCGCTACCTTCGCATCGGCCTATGCCCTCGCCGTCAATAAGAGATTTGA
TAATGGCGACTTCCCAACTGGTGACACCGACCCCAATGTTACGAGTGCAT
GTACGTACTGGGCGAATTCCATTAGCTCAACAGATACATGTGCGGACCTT
GAGAGCTACTATGGCATTACGTCCACACAGCTAACTTCCTGGTTTGCTGA
AACGCTCCATCCAGATAGTTGTCGTGAGCTACGTTGGGTATTCGGTCCTC
TAAGTGGTGCCACCGCAACCACCACAACATCTACCTCCACATCAACATCA
ACTGTGAGCAGCACAACACCCACCAGCAACGCTCCATCTCCAACCCAATC
GGGTCTAGTAGGTGACTGTTCCACCTACTACGAAGCCAAATCCGGAGACA
GCTGCTGGTTCATTGTCAACGACAAATACACCTACCTAACGACCTCCCTC
TTCGAAGAATGGAACCCCGCCGTCGGATCAGACTGCAGTAACCTGCAACC
GGGATACTATTACTGTGTGGCCACGCAGAAGCAGGCGCCAATGCCCGACA
CGATCGATACATGCAAGAAGTGGCACTTGGTAGCGGACGGGGATAATTGC
TGGTCAATAGAGCAGGACGCAGGTGTTACTGCGAGTCAGTTCAATATGTG
GAATCCGCGATAAATATTACTATGTTCAACACGGGGACACTTGCTCTGAC
ATCGCTACCAACCACGACATCAGCCTAAACGACTTCTACTCCTGGAACCC
AGCTGTAGGAACAACCTGTAGTGACCTGGAGGCTGACTATTGGGTCTGCG
TTGGTGTTTCTGGGCCGTGAAGTCCGACTGCTCCGGCCTACAACCGGACT
ATTATGTCTGTATCGGTGTCGCCGGAGATACCACAGTAGCCTCGCAGACG
ACGCTTCCTGCTACCACTACTGCCTCAGCGGCTACATCTACTGGGTCTTA
CCTGCCTGAGCAGACGGGAATCGCATCTAACTAACCCTTCTCTTTCAACT
ACCAGCTGTGCTCTCCAAGAGGGCTGGAGCTACTGTGTTAGCGCGCCAGC
TGTATCAACCACAGCCTCATCCACCAGCACTGTGTCCACGGTCTCTTCCT
CGCTCCTGTCTACTACTACGGCGGCACCTGCTCCAGGTACGACCACCGGC
GCGGGTAGCCCTTCCCCGACGCAAGGCGGCCTGAGCTCGAGCTGTGACGC
GTTTTACTACGTTGAAGCCGGTGATTCATGCTGGGCAATTGTTAACTCGT
ACGGCAACTTTACGCTAAATCAATTCTACTCCTGGAATCCATGGTTTCCA
GCCTTTTCCTTACTCTCGCTACCTTCGCATCGGCCTATGCCCTCGCCGTC
AATAAGAGATTTGATAATGGCGACTTCCCAACTGGTGACACCGACCCCAA
TGTTACGAGTGCATGTACGTACTGGGCGAATTCCATTAGCTCAACAGATA
CATGTGCGGACCTTGAGAGCTACTATGGCATTACGTCCACACAGCTAACT
TCCTGGTTTGCTGAAACGCTCCATCCAGATAGTTGTCGTGAGCTACGTTG
GGTATTCGGTCCTCTAAGTGGTGCCACCGCAACCACCACAACATCTACCT
CCACATCAACATCAACTGTGAGCAGCACAACACCCACCAGCAACGCTCCA
TCTCCAACCCAATCGGGTCTAGTAGGTGACTGTTCCACCTACTACGAAGC
CAAATCCGGAGACAGCTGCTGGTTCATTGTCAACGACAAATACACCTACC
TAACGACCTCCCTCTTCGAAGAATGGAACCCCGCCGTCGGATCAGACTGC
AGTAACCTGCAACCGGGATACTATTACTGTGTGGCCACGCAGAAGCAGGC
GCCAATGCCCGACACGATCGATACATGCAAGAAGTGGCACTTGGTAGCGG
ACGGGGATAATTGCTGGTCAATAGAGCAGGACGCAGGTGTTACTGCGAGT
CAGTTCAATATGTGGAATCCGCGATAAATATTACTATGTTCAACACGGGG
ACACTTGCTCTGACATCGCTACCAACCACGACATCAGCCTAAACGACTTC
TACTCCTGGAACCCAGCTGTAGGAACAACCTGTAGTGACCTGGAGGCTGA
CTATTGGGTCTGCGTTGGTGTTTCTGGGCCGTGAAGTCCGACTGCTCCGG
CCTACAACCGGACTATTATGTCTGTATCGGTGTCGCCGGAGATACCACAG
TAGCCTCGCAGACGACGCTTCCTGCTACCACTACTGCCTCAGCGGCTACA
TCTACTGGGTCTTACCTGCCTGAGCAGACGGGAATCGCATCTAACTAACC
CTTCTCTTTCAACTACCAGCTGTGCTCTCCAAGAGGGCTGGAGCTACTGT
GTTAGCGCGCCAGCTGTATCAACCACAGCCTCATCCACCAGCACTGTGTC
CACGGTCTCTTCCTCGCTCCTGTCTACTACTACGGCGGCACCTGCTCCAG
GTACGACCACCGGCGCGGGTAGCCCTTCCCCGACGCAAGGCGGCCTGAGC
TCGAGCTGTGACGCGTTTTACTACGTTGAAGCCGGTGATTCATGCTGGGC
AATTGTTAACTCGTACGGCAACTTTACGCTAAATCAATTCTACTCCTGGA
ATCCATGGTTTCCAGCCTTTTCCTTACTCTCGCTACCTTCGCATCGGCCT
ATGCCCTCGCCGTCAATAAGAGATTTGATAATGGCGACTTCCCAACTGGT
GACACCGACCCCAATGTTACGAGTGCATGTACGTACTGGGCGAATTCCAT
TAGCTCAACAGATACATGTGCGGACCTTGAGAGCTACTATGGCATTACGT
CCACACAGCTAACTTCCTGGTTTGCTGAAACGCTCCATCCAGATAGTTGT
CGTGAGCTACGTTGGGTATTCGGTCCTCTAAGTGGTGCCACCGCAACCAC
CACAACATCTACCTCCACATCAACATCAACTGTGAGCAGCACAACACCCA
CCAGCAACGCTCCATCTCCAACCCAATCGGGTCTAGTAGGTGACTGTTCC
ACCTACTACGAAGCCAAATCCGGAGACAGCTGCTGGTTCATTGTCAACGA
CAAATACACCTACCTAACGACCTCCCTCTTCGAAGAATGGAACCCCGCCG
TCGGATCAGACTGCAGTAACCTGCAACCGGGATACTATTACTGTGTGGCC
ACGCAGAAGCAGGCGCCAATGCCCGACACGATCGATACATGCAAGAAGTG
GCACTTGGTAGCGGACGGGGATAATTGCTGGTCAATAGAGCAGGACGCAG
GTGTTACTGCGAGTCAGTTCAATATGTGGAATCCGCGATAAATATTACTA
TGTTCAACACGGGGACACTTGCTCTGACATCGCTACCAACCACGACATCA
GCCTAAACGACTTCTACTCCTGGAACCCAGCTGTAGGAACAACCTGTAGT
GACCTGGAGGCTGACTATTGGGTCTGCGTTGGTGTTTCTGGGCCGTGAAG
TCCGACTGCTCCGGCCTACAACCGGACTATTATGTCTGTATCGGTGTCGC
CGGAGATACCACAGTAGCCTCGCAGACGACGCTTCCTGCTACCACTACTG
CCTCAGCGGCTACATCTACTGGGTCTTACCTGCCTGAGCAGACGGGAATC
GCATCTAACTAACCCTTCTCTTTCAACTACCAGCTGTGCTCTCCAAGAGG
GCTGGAGCTACTGTGTTAGCGCGCCAGCTGTATCAACCACAGCCTCATCC
ACCAGCACTGTGTCCACGGTCTCTTCCTCGCTCCTGTCTACTACTACGGC
GGCACCTGCTCCAGGTACGACCACCGGCGCGGGTAGCCCTTCCCCGACGC
AAGGCGGCCTGAGCTCGAGCTGTGACGCGTTTTACTACGTTGAAGCCGGT
GATTCATGCTGGGCAATTGTTAACTCGTACGGCAACTTTACGCTAAATCA
ATTCTACTCCTGGAATCCATGGTTTCCAGCCTTTTCCTTACTCTCGCTAC
CTTCGCATCGGCCTATGCCCTCGCCGTCAATAAGAGATTTGATAATGGCG
ACTTCCCAACTGGTGACACCGACCCCAATGTTACGAGTGCATGTACGTAC
TGGGCGAATTCCATTAGCTCAACAGATACATGTGCGGACCTTGAGAGCTA
CTATGGCATTACGTCCACACAGCTAACTTCCTGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| Note | SECRETED:SignalP(1-17) |
| Note | CAZy:CBM50 |
| DBxref | InterPro:IPR036779 |
| DBxref | InterPro:IPR018392 |
| DBxref | PFAM:PF01476 |
| Product | LysM domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:1523895..1526151 - |
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