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CAN33_24240-T1, CAN33_24240-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_24240-T1
Unique NameCAN33_24240-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:1567031..1568072+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_24240-T1 ID=CAN33_24240-T1|Name=CAN33_24240-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1042bp|location=Sequence derived from alignment at NKJJ01000002.1:1567031..1568072+ (Aspergillus niger FDAARGOS_311)
ATGTCCACAAACATCACCAACATCCCCCTCAGCTACGCAACCTGCTCCCT
CGGGCCCCCCAGCACTCCCCTCGAAGACAAACTCTCCTCCCTCAGCGCCG
CCTCCTTCACCGGCATCGAGCTGGCCTTCCCCGACCTCCTCGCCTACGCC
AACACCCACAACGCAGGAACCACCCAGATTCTTCCCCACGACTACACCTC
CTTAGCCCACGCCGCAACCGAAGTCCGCTCACTATGCGAGTCCCACAACC
TACAGATCATGATGCTACAACCCTTCGCCAACTTCGAAGGCTGGCCACGT
AACTCCCCGGAACGGGAAGACGCCTTCACGCGCGCCAAGGGATGGAGTCA
GATCATGGAAGCACTGGGGACGAAGATACTACAGATCGGGTCGACAGACA
CACCGGCCGAGAAACTCTCCCTCGGTAAGAACAAGGAGAATGTGGTGGAC
GATCTACGTGAGCTAGCGGATATACTCGCACCGAAAGGTCAGCGCATCGC
GTACGAGAACTGGTGCTGGAGTACCCATGCGCCCGGGTGGAAAGATGTAT
GGGAGATAGTGAGGGATGTGGGGAGGGAGAATGTGGGGTTGTGTTTGGAT
ACGTTTCAGACGGCGGGGGGGAGTGGGGGGATCCGACGACTGCGGATGGG
GTGGTTGGTGGTGGTGGTGATGAGGTGAGGAAGAGGTATGAGAGCAGTTT
GGAGGAGTTGGCCAGGACGGTTCCCGCGGAGAAGATCTTTCTGCTGCAGG
TGTCGGATGCGTATAAGCCACCGTCTCCGTTTGAGGATGCGGTGGTGGAT
GGGGCGAGGCCTAGGGCACGGTGGAGTCATAGTTTTAGGCCGATGCCGTA
TCATGGGGGTATTTGCCGATTGAGGAGGTGGGGAGGGCGGTGTTGAGGAC
TGGATTTCGGGGGTGGTTTTCGATGGAGATTTTTGATGGGGGAGTGAATG
GGGATGAGGAGATTGAGGATGTGGGGAAGTTTGCGAGGGAGGCGATGGGG
AGTATGAGGAGGTTTTTGGAGAGGTGCGCGGATGGTGTTTAG
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Coding sequence (CDS) from alignment at NKJJ01000002.1:1567031..1568072+

>CAN33_24240-T1 ID=CAN33_24240-T1|Name=CAN33_24240-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2448bp|location=Sequence derived from alignment at NKJJ01000002.1:1567031..1568072+ (Aspergillus niger FDAARGOS_311)
ATGTCCACAAACATCACCAACATCCCCCTCAGCTACGCAACCTGCTCCCT
CGGGCCCCCCAGCACTCCCCTCGAAGACAAACTCTCCTCCCTCAGCGCCG
CCTCCTTCACCGGCATCGAGCTGGCCTTCCCCGACCTCCTCGCCTACGCC
AACACCCACAACGCAGGAACCACCCAGATTCTTCCCCACGACTACACCTC
CTTAGCCCACGCCGCAACCGAAGTCCGCTCACTATGCGAGTCCCACAACC
TACAGATCATGATGCTACAACCCTTCGCCAACTTCGAAGGCTGGCCACGT
AACTCCCCGGAACGGGAAGACGCCTTCACGCGCGCCAAGGGATGGAGTCA
GATCATGGAAGCACTGGGGACGAAGATACTACAGATCGGGTCGACAGACA
CACCGGCCGAGAAACTCTCCCTCGGTAAGAACAAGGAGAATGTGGTGGAC
GATCTACGTGAGCTAGCGGATATACTCGCACCGAAAGGTCAGCGCATCGC
GAAGAGGTATGAGAGCAGTTTGGAGGAGTTGGCCAGGACGGTTCCCGCGG
AGAAGATCTTTCTGCTGCAGGTGTCGGATGCGTATAAGCCACCGTCTCCG
TTTGAGGATGCGGCCGATGCCGTATCATGGGGGTATTTGCCGATTGAGGA
GGTGGGGAGGGCGGTGTTGAGGACTGGATTTCGGGGGTGGTTTTCGATGG
AGATTTTTGATGGGGGAGTGAATGGGGATGAGGAGATTGAGGATGTGGGG
AAGTTTGCGAGGGAGGCGATGGGGAGTATGAGGAGGTTTTTGGAGAGGTG
CGCGGATGGTGTTTAGATGTCCACAAACATCACCAACATCCCCCTCAGCT
ACGCAACCTGCTCCCTCGGGCCCCCCAGCACTCCCCTCGAAGACAAACTC
TCCTCCCTCAGCGCCGCCTCCTTCACCGGCATCGAGCTGGCCTTCCCCGA
CCTCCTCGCCTACGCCAACACCCACAACGCAGGAACCACCCAGATTCTTC
CCCACGACTACACCTCCTTAGCCCACGCCGCAACCGAAGTCCGCTCACTA
TGCGAGTCCCACAACCTACAGATCATGATGCTACAACCCTTCGCCAACTT
CGAAGGCTGGCCACGTAACTCCCCGGAACGGGAAGACGCCTTCACGCGCG
CCAAGGGATGGAGTCAGATCATGGAAGCACTGGGGACGAAGATACTACAG
ATCGGGTCGACAGACACACCGGCCGAGAAACTCTCCCTCGGTAAGAACAA
GGAGAATGTGGTGGACGATCTACGTGAGCTAGCGGATATACTCGCACCGA
AAGGTCAGCGCATCGCGAAGAGGTATGAGAGCAGTTTGGAGGAGTTGGCC
AGGACGGTTCCCGCGGAGAAGATCTTTCTGCTGCAGGTGTCGGATGCGTA
TAAGCCACCGTCTCCGTTTGAGGATGCGGCCGATGCCGTATCATGGGGGT
ATTTGCCGATTGAGGAGGTGGGGAGGGCGGTGTTGAGGACTGGATTTCGG
GGGTGGTTTTCGATGGAGATTTTTGATGGGGGAGTGAATGGGGATGAGGA
GATTGAGGATGTGGGGAAGTTTGCGAGGGAGGCGATGGGGAGTATGAGGA
GGTTTTTGGAGAGGTGCGCGGATGGTGTTTAGATGTCCACAAACATCACC
AACATCCCCCTCAGCTACGCAACCTGCTCCCTCGGGCCCCCCAGCACTCC
CCTCGAAGACAAACTCTCCTCCCTCAGCGCCGCCTCCTTCACCGGCATCG
AGCTGGCCTTCCCCGACCTCCTCGCCTACGCCAACACCCACAACGCAGGA
ACCACCCAGATTCTTCCCCACGACTACACCTCCTTAGCCCACGCCGCAAC
CGAAGTCCGCTCACTATGCGAGTCCCACAACCTACAGATCATGATGCTAC
AACCCTTCGCCAACTTCGAAGGCTGGCCACGTAACTCCCCGGAACGGGAA
GACGCCTTCACGCGCGCCAAGGGATGGAGTCAGATCATGGAAGCACTGGG
GACGAAGATACTACAGATCGGGTCGACAGACACACCGGCCGAGAAACTCT
CCCTCGGTAAGAACAAGGAGAATGTGGTGGACGATCTACGTGAGCTAGCG
GATATACTCGCACCGAAAGGTCAGCGCATCGCGAAGAGGTATGAGAGCAG
TTTGGAGGAGTTGGCCAGGACGGTTCCCGCGGAGAAGATCTTTCTGCTGC
AGGTGTCGGATGCGTATAAGCCACCGTCTCCGTTTGAGGATGCGGCCGAT
GCCGTATCATGGGGGTATTTGCCGATTGAGGAGGTGGGGAGGGCGGTGTT
GAGGACTGGATTTCGGGGGTGGTTTTCGATGGAGATTTTTGATGGGGGAG
TGAATGGGGATGAGGAGATTGAGGATGTGGGGAAGTTTGCGAGGGAGGCG
ATGGGGAGTATGAGGAGGTTTTTGGAGAGGTGCGCGGATGGTGTTTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_24240CAN33_24240Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_24240-T1.exon1CAN33_24240-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_24240-T1.exon2CAN33_24240-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_24240-T1.exon3CAN33_24240-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_24240-T1.cdsCAN33_24240-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_24240-T1CAN33_24240-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036237
DBxrefInterPro:IPR013022
DBxrefPFAM:PF01261
ProductXylose isomerase-like TIM barrel family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:1567031..1568072 +
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