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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000004.1:1485268..1486259- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_2435-T1 ID=CAN33_2435-T1|Name=CAN33_2435-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=992bp|location=Sequence derived from alignment at NKJJ01000004.1:1485268..1486259- (Aspergillus niger FDAARGOS_311)
ATGGCACCCAAATCGAACAAGAAAGCTGTGGAGGAACGGGAGCCTACTCC
TATGAGCACATCGTCTGCTGGCGACTCGTCTAGCTCCGAGGTTGAGTCGA
ACCAGAGCGGAAGCGAGAGTGACAGCGATAGCAGCACTTCTTCCAACGAA
AAGACTTCTAGCCAGAAGTAGGTCTTCCCAATTGACTCAAGTGAAGGTTA
TATCAGTGACTTACGATGTGCTCGCATAGGACCTCCCGTAATGTATCCTT
AGCAGCACCCCAACCTTACAAAGCTCCGTCTGGATTCAAGTCCTTGAAAC
AACAAGCACCACCGAAGTCCAATGTCTCCTCTCTCCTGTCCGATCTTCGC
GGCAAGCAAGTCTACCACATTACGGCGCCAGACTACCTTCCTCTTTCCAA
GGTTGAGGAAGTCTCGTTGGCCAAGATCATGCAGGGCAAGCCGGTCTTGA
AACACAAGGGTGTGCAATACGGGATTCCGGTGGAAAGCTTTGCGCAACCC
GACCTGGGTGGAAAGACGCTTCACCTGTATGACTCGAAGACCAAGACCTA
CTACAGTACTGCCGCCAGCAACATCCCCAGCTACCACATCCAAGAAATGC
TCGACATTCCCGAGGTCAGCGATGAGACCGTTGCACAAGCTGTTCAGGAG
CAGATCAAGCCCCCGAGGAAACACCCCAAACACTTGAAGATGCGTTTCCG
CCCCGTAGGAAGTGGCGTGGCACCCCCCGAGACCCTCGGGTCCAGTTCGG
AGGAGTCGGAAGACGAGACGCCTACATTCAAGGTCCCCAAGTCGTTGGAG
AAGGAGCGGGATGAGAGAAAGCGCAAGAACCACCCTACTGAGGCGGACGG
GAGCCAGGCCGACGCCGGTGATGTGCCTCGTAAGAAGTCCAGAAAGTCCG
CTCAGGAGGGAGGTGAAGGCGAGGACAAGAAGAAGAAGTCCAGCAAGAGC
CGGGAGGAGAAGAAGCGCAAGAAGTCCGAGAAGTCTACTTGA back to topCoding sequence (CDS) from alignment at NKJJ01000004.1:1485268..1486259- >CAN33_2435-T1 ID=CAN33_2435-T1|Name=CAN33_2435-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1860bp|location=Sequence derived from alignment at NKJJ01000004.1:1485268..1486259- (Aspergillus niger FDAARGOS_311)
GACCTCCCGTAATGTATCCTTAGCAGCACCCCAACCTTACAAAGCTCCGT
CTGGATTCAAGTCCTTGAAACAACAAGCACCACCGAAGTCCAATGTCTCC
TCTCTCCTGTCCGATCTTCGCGGCAAGCAAGTCTACCACATTACGGCGCC
AGACTACCTTCCTCTTTCCAAGGTTGAGGAAGTCTCGTTGGCCAAGATCA
TGCAGGGCAAGCCGGTCTTGAAACACAAGGGTGTGCAATACGGGATTCCG
GTGGAAAGCTTTGCGCAACCCGACCTGGGTGGAAAGACGCTTCACCTGTA
TGACTCGAAGACCAAGACCTACTACAGTACTGCCGCCAGCAACATCCCCA
GCTACCACATCCAAGAAATGCTCGACATTCCCGAGGTCAGCGATGAGACC
GTTGCACAAGCTGTTCAGGAGCAGATCAAGCCCCCGAGGAAACACCCCAA
ACACTTGAAGATGCGTTTCCGCCCCGTAGGAAGTGGCGTGGCACCCCCCG
AGACCCTCGGGTCCAGTTCGGAGGAGTCGGAAGACGAGACGCCTACATTC
AAGGTCCCCAAGTCGTTGGAGAAGGAGCGGGATGAGAGAAAGCGCAAGAA
CCACCCTACTGAGGCGGACGGGAGCCAGGCCGACGCCGGTGATGTGCCTC
GTAAGAAGTCCAGAAAGTCCGCTCAGGAGGGAGGTGAAGGCGAGGACAAG
AAGAAGAAGTCCAGCAAGAGCCGGGAGGAGAAGAAGCGCAAGAAGTCCGA
GAAGTCTACTTGAATGGCACCCAAATCGAACAAGAAAGCTGTGGAGGAAC
GGGAGCCTACTCCTATGAGCACATCGTCTGCTGGCGACTCGTCTAGCTCC
GAGGTTGAGTCGAACCAGAGCGGAAGCGAGAGTGACAGCGATAGCAGCAC
TTCTTCCAACGAAAAGACTTCTAGCCAGAAGACCTCCCGTAATGTATCCT
TAGCAGCACCCCAACCTTACAAAGCTCCGTCTGGATTCAAGTCCTTGAAA
CAACAAGCACCACCGAAGTCCAATGTCTCCTCTCTCCTGTCCGATCTTCG
CGGCAAGCAAGTCTACCACATTACGGCGCCAGACTACCTTCCTCTTTCCA
AGGTTGAGGAAGTCTCGTTGGCCAAGATCATGCAGGGCAAGCCGGTCTTG
AAACACAAGGGTGTGCAATACGGGATTCCGGTGGAAAGCTTTGCGCAACC
CGACCTGGGTGGAAAGACGCTTCACCTGTATGACTCGAAGACCAAGACCT
ACTACAGTACTGCCGCCAGCAACATCCCCAGCTACCACATCCAAGAAATG
CTCGACATTCCCGAGGTCAGCGATGAGACCGTTGCACAAGCTGTTCAGGA
GCAGATCAAGCCCCCGAGGAAACACCCCAAACACTTGAAGATGCGTTTCC
GCCCCGTAGGAAGTGGCGTGGCACCCCCCGAGACCCTCGGGTCCAGTTCG
GAGGAGTCGGAAGACGAGACGCCTACATTCAAGGTCCCCAAGTCGTTGGA
GAAGGAGCGGGATGAGAGAAAGCGCAAGAACCACCCTACTGAGGCGGACG
GGAGCCAGGCCGACGCCGGTGATGTGCCTCGTAAGAAGTCCAGAAAGTCC
GCTCAGGAGGGAGGTGAAGGCGAGGACAAGAAGAAGAAGTCCAGCAAGAG
CCGGGAGGAGAAGAAGCGCAAGAAGTCCGAGAAGTCTACTTGAATGGCAC
CCAAATCGAACAAGAAAGCTGTGGAGGAACGGGAGCCTACTCCTATGAGC
ACATCGTCTGCTGGCGACTCGTCTAGCTCCGAGGTTGAGTCGAACCAGAG
CGGAAGCGAGAGTGACAGCGATAGCAGCACTTCTTCCAACGAAAAGACTT
CTAGCCAGAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006360 | transcription by RNA polymerase I |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR013240 |
| DBxref | PFAM:PF08208 |
| Product | DNA-directed RNA polymerase I subunit RPA34.5 family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000004.1 | supercontig | NKJJ01000004.1:1485268..1486259 - |
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