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CAN33_24675-T1, CAN33_24675-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_24675-T1
Unique NameCAN33_24675-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:1801972..1803111-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_24675-T1 ID=CAN33_24675-T1|Name=CAN33_24675-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1140bp|location=Sequence derived from alignment at NKJJ01000002.1:1801972..1803111- (Aspergillus niger FDAARGOS_311)
ATGTCGTCGGCTAAGCCCCGCATTCTCTTCTTCAACCCCGTGAGGCACGC
AGTGCCGTTCTATGAGAAGCTCCAAGAACATGCCCAAACAGAGGTTGTGA
CAAGTAAAGGCAGGGAGGAGTTCTTCAAAGATGTCACAGGCAAATATAAA
GATATTTTTGCCATCTATCGGACATCCGCTAGCGGTGCAGTGAGTATTAC
CCTTGCCTATCCGTGATGAGATCGGACGTCCATCCGCATCAGTAATCTAA
TAAGAAACTCTGTGAAGGTAGCCGGCAAGTTCGACGCAGAACTAATCAAC
CATCTTCCCGAAAGTTGCAAATACATTTTTCACAATGGAGCAGGTAAGGT
TCCCACCTAGTACCCAAAACAGCCTCACTAAAACCAATCGCAAGGCTATG
ACCCAATCGACACGGAAGCCTGCGCCAAGCGAGGCATCATCGTCACCAAC
GCCCCAGACCCAGTCACAGATGCAACCGCTGACCTAGCAGTCCTCCTCCT
CCTGGGTGCTCTCCGAAACCTCAACCCTGCGATTCGCTCCCTCTACGCAG
GAACCTTCAAACAAGGCGTAGGTTTTGGCCACGACCCCCAAGGCAAGACG
CTAGGTATTCTCGGTATGGGCCGAATCGGTCGCGCTGTCAAACAGCGCTG
CGAGCCTTTTGGCATCAAGACCGTCTATAATAATCGACGTCCTTTATCTG
CTGATTTATCCGCGGGGGCCGAGTATGTCTCGTTTGAGAAGCTGCTCACT
GAGAGCGATATTATTAGTATTAACGTGCCCCTGAATGCGAATACAAAGCA
CTTGATTGGCGCAGCCGAGATCGCGAAAATGAAGCCCGGTATTGTTATTA
TCAATACTGCTCGTGGTGCTATTATTGATGAGGCTGCTATGGCCGATGCC
CTGGAGACTGGGCAAATCGGCGCTGTTGGGTTGGATGTGTATGAACGGGA
GCCGGAGATTAACGAGAAGCTTGCGAAGAATGAACGTGCGCTTTTGGTGC
CGCATATTGGGACGCATACGTATGAGACGCTGGCGAAGATGGAGGAGTGG
GCGATGGAGAATGCGAGACGGGCGATTATGGGTGAGGTGTTGTTGTCGCC
AGTTCCGGAGCATTCGGAGTTGGTGAATGGGAATGCTTGA
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Coding sequence (CDS) from alignment at NKJJ01000002.1:1801972..1803111-

>CAN33_24675-T1 ID=CAN33_24675-T1|Name=CAN33_24675-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3033bp|location=Sequence derived from alignment at NKJJ01000002.1:1801972..1803111- (Aspergillus niger FDAARGOS_311)
GCTATGACCCAATCGACACGGAAGCCTGCGCCAAGCGAGGCATCATCGTC
ACCAACGCCCCAGACCCAGTCACAGATGCAACCGCTGACCTAGCAGTCCT
CCTCCTCCTGGGTGCTCTCCGAAACCTCAACCCTGCGATTCGCTCCCTCT
ACGCAGGAACCTTCAAACAAGGCGTAGGTTTTGGCCACGACCCCCAAGGC
AAGACGCTAGGTATTCTCGGTATGGGCCGAATCGGTCGCGCTGTCAAACA
GCGCTGCGAGCCTTTTGGCATCAAGACCGTCTATAATAATCGACGTCCTT
TATCTGCTGATTTATCCGCGGGGGCCGAGTATGTCTCGTTTGAGAAGCTG
CTCACTGAGAGCGATATTATTAGTATTAACGTGCCCCTGAATGCGAATAC
AAAGCACTTGATTGGCGCAGCCGAGATCGCGAAAATGAAGCCCGGTATTG
TTATTATCAATACTGCTCGTGGTGCTATTATTGATGAGGCTGCTATGGCC
GATGCCCTGGAGACTGGGCAAATCGGCGCTGTTGGGTTGGATGTGTATGA
ACGGGAGCCGGAGATTAACGAGAAGCTTGCGAAGAATGAACGTGCGCTTT
TGGTGCCGCATATTGGGACGCATACGTATGAGACGCTGGCGAAGATGGAG
GAGTGGGCGATGGAGAATGCGAGACGGGCGATTATGGGTGAGGTGTTGTT
GTCGCCAGTTCCGGAGCATTCGGAGTTGGTGAATGGGAATGCTTGAGTAG
CCGGCAAGTTCGACGCAGAACTAATCAACCATCTTCCCGAAAGTTGCAAA
TACATTTTTCACAATGGAGCAGATGTCGTCGGCTAAGCCCCGCATTCTCT
TCTTCAACCCCGTGAGGCACGCAGTGCCGTTCTATGAGAAGCTCCAAGAA
CATGCCCAAACAGAGGTTGTGACAAGTAAAGGCAGGGAGGAGTTCTTCAA
AGATGTCACAGGCAAATATAAAGATATTTTTGCCATCTATCGGACATCCG
CTAGCGGTGCAGCTATGACCCAATCGACACGGAAGCCTGCGCCAAGCGAG
GCATCATCGTCACCAACGCCCCAGACCCAGTCACAGATGCAACCGCTGAC
CTAGCAGTCCTCCTCCTCCTGGGTGCTCTCCGAAACCTCAACCCTGCGAT
TCGCTCCCTCTACGCAGGAACCTTCAAACAAGGCGTAGGTTTTGGCCACG
ACCCCCAAGGCAAGACGCTAGGTATTCTCGGTATGGGCCGAATCGGTCGC
GCTGTCAAACAGCGCTGCGAGCCTTTTGGCATCAAGACCGTCTATAATAA
TCGACGTCCTTTATCTGCTGATTTATCCGCGGGGGCCGAGTATGTCTCGT
TTGAGAAGCTGCTCACTGAGAGCGATATTATTAGTATTAACGTGCCCCTG
AATGCGAATACAAAGCACTTGATTGGCGCAGCCGAGATCGCGAAAATGAA
GCCCGGTATTGTTATTATCAATACTGCTCGTGGTGCTATTATTGATGAGG
CTGCTATGGCCGATGCCCTGGAGACTGGGCAAATCGGCGCTGTTGGGTTG
GATGTGTATGAACGGGAGCCGGAGATTAACGAGAAGCTTGCGAAGAATGA
ACGTGCGCTTTTGGTGCCGCATATTGGGACGCATACGTATGAGACGCTGG
CGAAGATGGAGGAGTGGGCGATGGAGAATGCGAGACGGGCGATTATGGGT
GAGGTGTTGTTGTCGCCAGTTCCGGAGCATTCGGAGTTGGTGAATGGGAA
TGCTTGAGTAGCCGGCAAGTTCGACGCAGAACTAATCAACCATCTTCCCG
AAAGTTGCAAATACATTTTTCACAATGGAGCAGATGTCGTCGGCTAAGCC
CCGCATTCTCTTCTTCAACCCCGTGAGGCACGCAGTGCCGTTCTATGAGA
AGCTCCAAGAACATGCCCAAACAGAGGTTGTGACAAGTAAAGGCAGGGAG
GAGTTCTTCAAAGATGTCACAGGCAAATATAAAGATATTTTTGCCATCTA
TCGGACATCCGCTAGCGGTGCAGCTATGACCCAATCGACACGGAAGCCTG
CGCCAAGCGAGGCATCATCGTCACCAACGCCCCAGACCCAGTCACAGATG
CAACCGCTGACCTAGCAGTCCTCCTCCTCCTGGGTGCTCTCCGAAACCTC
AACCCTGCGATTCGCTCCCTCTACGCAGGAACCTTCAAACAAGGCGTAGG
TTTTGGCCACGACCCCCAAGGCAAGACGCTAGGTATTCTCGGTATGGGCC
GAATCGGTCGCGCTGTCAAACAGCGCTGCGAGCCTTTTGGCATCAAGACC
GTCTATAATAATCGACGTCCTTTATCTGCTGATTTATCCGCGGGGGCCGA
GTATGTCTCGTTTGAGAAGCTGCTCACTGAGAGCGATATTATTAGTATTA
ACGTGCCCCTGAATGCGAATACAAAGCACTTGATTGGCGCAGCCGAGATC
GCGAAAATGAAGCCCGGTATTGTTATTATCAATACTGCTCGTGGTGCTAT
TATTGATGAGGCTGCTATGGCCGATGCCCTGGAGACTGGGCAAATCGGCG
CTGTTGGGTTGGATGTGTATGAACGGGAGCCGGAGATTAACGAGAAGCTT
GCGAAGAATGAACGTGCGCTTTTGGTGCCGCATATTGGGACGCATACGTA
TGAGACGCTGGCGAAGATGGAGGAGTGGGCGATGGAGAATGCGAGACGGG
CGATTATGGGTGAGGTGTTGTTGTCGCCAGTTCCGGAGCATTCGGAGTTG
GTGAATGGGAATGCTTGAGTAGCCGGCAAGTTCGACGCAGAACTAATCAA
CCATCTTCCCGAAAGTTGCAAATACATTTTTCACAATGGAGCAGATGTCG
TCGGCTAAGCCCCGCATTCTCTTCTTCAACCCCGTGAGGCACGCAGTGCC
GTTCTATGAGAAGCTCCAAGAACATGCCCAAACAGAGGTTGTGACAAGTA
AAGGCAGGGAGGAGTTCTTCAAAGATGTCACAGGCAAATATAAAGATATT
TTTGCCATCTATCGGACATCCGCTAGCGGTGCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0051287NAD binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_24675CAN33_24675Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_24675-T1CAN33_24675-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_24675-T1.cdsCAN33_24675-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_24675-T1.exon3CAN33_24675-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_24675-T1.exon2CAN33_24675-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_24675-T1.exon1CAN33_24675-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000021.14
NoteSMCOG1072:dehydrogenase
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR029753
DBxrefInterPro:IPR006140
DBxrefInterPro:IPR006139
DBxrefPFAM:PF02826
DBxrefPFAM:PF00389
ProductD-isomer specific 2-hydroxyacid dehydrogenase NAD binding domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:1801972..1803111 -
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