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CAN33_25575-T1, CAN33_25575-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_25575-T1
Unique NameCAN33_25575-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:2373995..2375237+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_25575-T1 ID=CAN33_25575-T1|Name=CAN33_25575-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1243bp|location=Sequence derived from alignment at NKJJ01000002.1:2373995..2375237+ (Aspergillus niger FDAARGOS_311)
ATGCTCGCCCCCCGCCTGTTGCGGCCGGCATCTTCGCTGGTTCGCCCCTT
CAGTTCCACTGCCACTGCCTCCCGCGCCCCCTCTATCCGTGACATCACCC
CCGACTCGGCTGTTGAGTTTAACGCACGTCAGAAGGAGTTCCGCGAGAAC
CTGGAGGTTGCTCGCAAGAAGAGAGAACAGCAAGAGAGTCAGTCTGTCGA
TGCTTCTGGTTCTACCTCTGCCCCATCCCCTGCATCCCGTGACCGCCTTC
GTGAGTACGCTACCGCTCCCACTGCTCCGAGTGAGAGCAATGCGAGCAGT
AACAAACATCCCGTTTTTGATGCCGCTGAAGTTCTTGATAATAAGGCTTT
GGGCTCACTTTCTACCCACCGTATTATAGGAGACGAGCAGCTGCAGGAAG
CCAGTCAGTCTCCGAAGCGCGGCCCCCTGTCGTCGCTCATCTACGGAACC
AAGGAAGGCCAGCAGCTGGACAAAGATATCGAACGGTCATTCTCGCAGGT
TCTCGCCCGTGGAAAATACGTACATTCCATCGTCTTTCACGACGTGAAGC
CCGATAAAGTTGACGACTATGTGAACCTCGTCGGCCAGTGGTACCCTCGC
ATGGCTGCCGACCCCGAGAACCGGGTGAATTTGGTTGGCAGCTGGCGCAC
GCAGGTTGGCGATAATGACACTTTTGGTACTTGAATTGACGCGCCCATCC
AGTTCTTCACTACCGCTGAGAATGCGTCTGTTACTGTGGATGCTAACGAT
TCTTGCAGTTCACATCTGGGAATATCAGCGATATGAAGGCTACCATGCTT
CCCTTCACAACATCTCCTGTCACCCCGAATTCCCCGAATTTGACCGGCAG
TTGAAGGGCTTGATCAAGAGCAAGAAGACGTCGCTGATGCAGGAATTCTC
TTTCTGGCCCACGACGCCTCCGCGGCGGCTGGGCGGCCTCTTTGAGCTCC
GATCATATACCCTTCATCCCGGGAATCTTCTGGAGTGGGAAACACACTGG
CGTCGTGGCCTCAAGGCTCGCCGGGAGGTGATGGAGGGTGTTGGGGCGTG
GTTTGTTCAGATCGGGGACCTGAACACCGTGCACCATCTCTGGCAGTTTG
CGAACCTCGAAGAGCGGAAAGTCCGCCGGGAACAATCCTGGGGTATCGAA
GGCTGGGCGGAAACTGTCCACAAGACGGTGCCACTCATCCAGACTATGCA
GAGTCGGATCCTGATCCCCATGCCCTGGAGTCCTGTTGGCTAA
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Coding sequence (CDS) from alignment at NKJJ01000002.1:2373995..2375237+

>CAN33_25575-T1 ID=CAN33_25575-T1|Name=CAN33_25575-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2322bp|location=Sequence derived from alignment at NKJJ01000002.1:2373995..2375237+ (Aspergillus niger FDAARGOS_311)
ATGCTCGCCCCCCGCCTGTTGCGGCCGGCATCTTCGCTGGTTCGCCCCTT
CAGTTCCACTGCCACTGCCTCCCGCGCCCCCTCTATCCGTGACATCACCC
CCGACTCGGCTGTTGAGTTTAACGCACGTCAGAAGGAGTTCCGCGAGAAC
CTGGAGGTTGCTCGCAAGAAGAGAGAACAGCAAGAGAGTCAGTCTGTCGA
TGCTTCTGGTTCTACCTCTGCCCCATCCCCTGCATCCCGTGACCGCCTTC
GTGAGTACGCTACCGCTCCCACTGCTCCGAGTGAGAGCAATGCGAGCAGT
AACAAACATCCCGTTTTTGATGCCGCTGAAGTTCTTGATAATAAGGCTTT
GGGCTCACTTTCTACCCACCGTATTATAGGAGACGAGCAGCTGCAGGAAG
CCAGTCAGTCTCCGAAGCGCGGCCCCCTGTCGTCGCTCATCTACGGAACC
AAGGAAGGCCAGCAGCTGGACAAAGATATCGAACGGTCATTCTCGCAGGT
TCTCGCCCGTGGAAAATACGTACATTCCATCGTCTTTCACGACGTGAAGC
CCGATAAAGTTGACGACTATGTGAACCTCGTCGGCCAGTGGTACCCTCGC
ATGGCTGCCGACCCCGAGAACCGGGTGAATTTGGTTGGCAGCTGGCGCAC
GCAGGTTGGCGATAATGACACTTTTGTTCACATCTGGGAATATCAGCGAT
ATGAAGGCTACCATGCTTCCCTTCACAACATCTCCTGTCACCCCGAATTC
CCCGAATTTGACCGGCAGTTGAAGGGCTTGATCAAGAGCAAGAAGACGTC
GCTGATGCAGGAATTCTCTTTCTGGCCCACGACGCCTCCGCGGCGGCTGG
GCGGCCTCTTTGAGCTCCGATCATATACCCTTCATCCCGGGAATCTTCTG
GAGTGGGAAACACACTGGCGTCGTGGCCTCAAGGCTCGCCGGGAGGTGAT
GGAGGGTGTTGGGGCGTGGTTTGTTCAGATCGGGGACCTGAACACCGTGC
ACCATCTCTGGCAGTTTGCGAACCTCGAAGAGCGGAAAGTCCGCCGGGAA
CAATCCTGGGGTATCGAAGGCTGGGCGGAAACTGTCCACAAGACGGTGCC
ACTCATCCAGACTATGCAGAGTCGGATCCTGATCCCCATGCCCTGGAGTC
CTGTTGGCTAAATGCTCGCCCCCCGCCTGTTGCGGCCGGCATCTTCGCTG
GTTCGCCCCTTCAGTTCCACTGCCACTGCCTCCCGCGCCCCCTCTATCCG
TGACATCACCCCCGACTCGGCTGTTGAGTTTAACGCACGTCAGAAGGAGT
TCCGCGAGAACCTGGAGGTTGCTCGCAAGAAGAGAGAACAGCAAGAGAGT
CAGTCTGTCGATGCTTCTGGTTCTACCTCTGCCCCATCCCCTGCATCCCG
TGACCGCCTTCGTGAGTACGCTACCGCTCCCACTGCTCCGAGTGAGAGCA
ATGCGAGCAGTAACAAACATCCCGTTTTTGATGCCGCTGAAGTTCTTGAT
AATAAGGCTTTGGGCTCACTTTCTACCCACCGTATTATAGGAGACGAGCA
GCTGCAGGAAGCCAGTCAGTCTCCGAAGCGCGGCCCCCTGTCGTCGCTCA
TCTACGGAACCAAGGAAGGCCAGCAGCTGGACAAAGATATCGAACGGTCA
TTCTCGCAGGTTCTCGCCCGTGGAAAATACGTACATTCCATCGTCTTTCA
CGACGTGAAGCCCGATAAAGTTGACGACTATGTGAACCTCGTCGGCCAGT
GGTACCCTCGCATGGCTGCCGACCCCGAGAACCGGGTGAATTTGGTTGGC
AGCTGGCGCACGCAGGTTGGCGATAATGACACTTTTGTTCACATCTGGGA
ATATCAGCGATATGAAGGCTACCATGCTTCCCTTCACAACATCTCCTGTC
ACCCCGAATTCCCCGAATTTGACCGGCAGTTGAAGGGCTTGATCAAGAGC
AAGAAGACGTCGCTGATGCAGGAATTCTCTTTCTGGCCCACGACGCCTCC
GCGGCGGCTGGGCGGCCTCTTTGAGCTCCGATCATATACCCTTCATCCCG
GGAATCTTCTGGAGTGGGAAACACACTGGCGTCGTGGCCTCAAGGCTCGC
CGGGAGGTGATGGAGGGTGTTGGGGCGTGGTTTGTTCAGATCGGGGACCT
GAACACCGTGCACCATCTCTGGCAGTTTGCGAACCTCGAAGAGCGGAAAG
TCCGCCGGGAACAATCCTGGGGTATCGAAGGCTGGGCGGAAACTGTCCAC
AAGACGGTGCCACTCATCCAGACTATGCAGAGTCGGATCCTGATCCCCAT
GCCCTGGAGTCCTGTTGGCTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_25575CAN33_25575Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_25575-T1.exon1CAN33_25575-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_25575-T1.exon2CAN33_25575-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_25575-T1.cdsCAN33_25575-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_25575-T1CAN33_25575-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR011008
DBxrefInterPro:IPR012577
DBxrefPFAM:PF07978
ProductNIPSNAP family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:2373995..2375237 +
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