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CAN33_25915-T1, CAN33_25915-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_25915-T1
Unique NameCAN33_25915-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:2559496..2560351+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_25915-T1 ID=CAN33_25915-T1|Name=CAN33_25915-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=856bp|location=Sequence derived from alignment at NKJJ01000002.1:2559496..2560351+ (Aspergillus niger FDAARGOS_311)
ATGTCGCTCCTTGAAAGTCATCTAGAGCAGATCTCACTGTCTTCTAATGC
CATTGCGGAGCTACCGTATGCATCCCCCTCTCACCTTGCTTCGTACCCGG
CATTGATTGTTTCTGCCCCAGGTTTCCCCAACCGCGGATCTTCACCAATG
CGCTGCTAGGCCCCCACGATATCACCTCCTTGATTCGAGATACGGAGGCT
CATGAACGGGCTCTCTTTCAATCCGATCCCTCCGTCAAATCGGTCGGCTC
ACAGCGACGTCCCACCCGACGCGGCACGCAGTTTGCGCAGGATTCGGAAG
GCGAGTCCATGGCAAGTCGGATTTATTCCGCTAGAGATAACAAGAGTCAA
TCAGCCGTCGCAAGGGTTCTGGGTGCTGATATGATGGAGGAGATCAAGCG
ATCCGCTGGCACGTCGAGTAGGGGTCGTGGTGAAGTCAACGTCGACGTTC
TACTCCAGGGCGCAGAGATTCTCTGCAATGTCTAGTACGCTCTTCACTCG
TCCTCAAGTGCCAAGTCCTGCTTATAATTACTGACTACATGCACAGTCCT
GTCGCTGGTGCACATGAGAAAATAGCCAGTCTACGTTATCGTCACGAGTT
GATTTCAGGTTCGATTAATGAACTGGAGGCACGTGTGGCTAGAAACACCG
CAGAGTTGGAAAAGATGAGCCACTCCTACGGAGATGACTTTGATGAATAT
GATGGCATCGATTCCACACCGCCCGAGGTGGCTGATGTTACGGATGCAGA
CCTTGAGCGAGAGATGGCGGAGATCCGCGAGCTGGAGAGAAAGAAACGCA
CATTGGAGGCCCGTGTTCACGGCATGGAACGAGACCTGGGTGGGTTGTTG
GGTTGA
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Coding sequence (CDS) from alignment at NKJJ01000002.1:2559496..2560351+

>CAN33_25915-T1 ID=CAN33_25915-T1|Name=CAN33_25915-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2214bp|location=Sequence derived from alignment at NKJJ01000002.1:2559496..2560351+ (Aspergillus niger FDAARGOS_311)
ATGTCGCTCCTTGAAAGTCATCTAGAGCAGATCTCACTGTCTTCTAATGC
CATTGCGGAGCTACCGTTTCCCCAACCGCGGATCTTCACCAATGCGCTGC
TAGGCCCCCACGATATCACCTCCTTGATTCGAGATACGGAGGCTCATGAA
CGGGCTCTCTTTCAATCCGATCCCTCCGTCAAATCGGTCGGCTCACAGCG
ACGTCCCACCCGACGCGGCACGCAGTTTGCGCAGGATTCGGAAGGCGAGT
CCATGGCAAGTCGGATTTATTCCGCTAGAGATAACAAGAGTCAATCAGCC
GTCGCAAGGGTTCTGGGTGCTGATATGATGGAGGAGATCAAGCGATCCGC
TGGCACGTCGAGTAGGGGTCGTGGTGAAGTCAACGTCGACGTTCTACTCC
AGGGCGCAGAGATTCTCTGCAATGTCTATCCTGTCGCTGGTGCACATGAG
AAAATAGCCAGTCTACGTTATCGTCACGAGTTGATTTCAGGTTCGATTAA
TGAACTGGAGGCACGTGTGGCTAGAAACACCGCAGAGTTGGAAAAGATGA
GCCACTCCTACGGAGATGACTTTGATGAATATGATGGCATCGATTCCACA
CCGCCCGAGGTGGCTGATGTTACGGATGCAGACCTTGAGCGAGAGATGGC
GGAGATCCGCGAGCTGGAGAGAAAGAAACGCACATTGGAGGCCCGTGTTC
ACGGCATGGAACGAGACCTGGGTGGGTTGTTGGGTTGAATGTCGCTCCTT
GAAAGTCATCTAGAGCAGATCTCACTGTCTTCTAATGCCATTGCGGAGCT
ACCGTTTCCCCAACCGCGGATCTTCACCAATGCGCTGCTAGGCCCCCACG
ATATCACCTCCTTGATTCGAGATACGGAGGCTCATGAACGGGCTCTCTTT
CAATCCGATCCCTCCGTCAAATCGGTCGGCTCACAGCGACGTCCCACCCG
ACGCGGCACGCAGTTTGCGCAGGATTCGGAAGGCGAGTCCATGGCAAGTC
GGATTTATTCCGCTAGAGATAACAAGAGTCAATCAGCCGTCGCAAGGGTT
CTGGGTGCTGATATGATGGAGGAGATCAAGCGATCCGCTGGCACGTCGAG
TAGGGGTCGTGGTGAAGTCAACGTCGACGTTCTACTCCAGGGCGCAGAGA
TTCTCTGCAATGTCTATCCTGTCGCTGGTGCACATGAGAAAATAGCCAGT
CTACGTTATCGTCACGAGTTGATTTCAGGTTCGATTAATGAACTGGAGGC
ACGTGTGGCTAGAAACACCGCAGAGTTGGAAAAGATGAGCCACTCCTACG
GAGATGACTTTGATGAATATGATGGCATCGATTCCACACCGCCCGAGGTG
GCTGATGTTACGGATGCAGACCTTGAGCGAGAGATGGCGGAGATCCGCGA
GCTGGAGAGAAAGAAACGCACATTGGAGGCCCGTGTTCACGGCATGGAAC
GAGACCTGGGTGGGTTGTTGGGTTGAATGTCGCTCCTTGAAAGTCATCTA
GAGCAGATCTCACTGTCTTCTAATGCCATTGCGGAGCTACCGTTTCCCCA
ACCGCGGATCTTCACCAATGCGCTGCTAGGCCCCCACGATATCACCTCCT
TGATTCGAGATACGGAGGCTCATGAACGGGCTCTCTTTCAATCCGATCCC
TCCGTCAAATCGGTCGGCTCACAGCGACGTCCCACCCGACGCGGCACGCA
GTTTGCGCAGGATTCGGAAGGCGAGTCCATGGCAAGTCGGATTTATTCCG
CTAGAGATAACAAGAGTCAATCAGCCGTCGCAAGGGTTCTGGGTGCTGAT
ATGATGGAGGAGATCAAGCGATCCGCTGGCACGTCGAGTAGGGGTCGTGG
TGAAGTCAACGTCGACGTTCTACTCCAGGGCGCAGAGATTCTCTGCAATG
TCTATCCTGTCGCTGGTGCACATGAGAAAATAGCCAGTCTACGTTATCGT
CACGAGTTGATTTCAGGTTCGATTAATGAACTGGAGGCACGTGTGGCTAG
AAACACCGCAGAGTTGGAAAAGATGAGCCACTCCTACGGAGATGACTTTG
ATGAATATGATGGCATCGATTCCACACCGCCCGAGGTGGCTGATGTTACG
GATGCAGACCTTGAGCGAGAGATGGCGGAGATCCGCGAGCTGGAGAGAAA
GAAACGCACATTGGAGGCCCGTGTTCACGGCATGGAACGAGACCTGGGTG
GGTTGTTGGGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005876spindle microtubule
GO:0042729DASH complex
Vocabulary: Biological Process
TermDefinition
GO:0008608attachment of spindle microtubules to kinetochore
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_25915CAN33_25915Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_25915-T1.exon1CAN33_25915-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_25915-T1.exon2CAN33_25915-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_25915-T1.exon3CAN33_25915-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_25915-T1.cdsCAN33_25915-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_25915-T1CAN33_25915-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR013966
ProductDASH complex subunit Spc34 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:2559496..2560351 +
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