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CAN33_25950-T1, CAN33_25950-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_25950-T1
Unique NameCAN33_25950-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:2585777..2586291+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_25950-T1 ID=CAN33_25950-T1|Name=CAN33_25950-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=515bp|location=Sequence derived from alignment at NKJJ01000002.1:2585777..2586291+ (Aspergillus niger FDAARGOS_311)
ATGGGTCCTGTGAGTAATCCCGGATTTCTTTGGTGGTCGTCCGGATGCAG
CAAGTGTCTTTGTTCCCTTGTTCAGGAGGACCTTGCGGCACCCAACGGCG
TTTGATAGCAGGAATACTTTGCTAACGCGACTTCCAGGGTGACTCCCCCT
ACTCAGGAGGTGTTTTCTTCCTGAACATCCACTTCCCCACCGACTACCCA
TTCAAGCCCCCGAAGGTCAACTTCACCACCCGGATTTACCACCCCAACAT
CAACGCCAACGGCAGCATCTGTCTTGACATTCTCAGAGACCAGTGGAGTC
CTGCTCTCACGATCTCCAAGGGTATGTTTCCTTCTGCCTGCAGAGCTATT
GACGCATATACTAATCTGCTTCCAGTGCTCCTTTCGATCTGCTCTATGCT
CACAGACCCCAACCCCGACGACCCGTTGGTGCCGGAAATCGCTCACGTGT
ACAAGACGGACCGTCCCCGGTACGAAGCGACCGCGCGGGAATGGACTCGC
AAATATGCCATCTGA
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Coding sequence (CDS) from alignment at NKJJ01000002.1:2585777..2586291+

>CAN33_25950-T1 ID=CAN33_25950-T1|Name=CAN33_25950-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=999bp|location=Sequence derived from alignment at NKJJ01000002.1:2585777..2586291+ (Aspergillus niger FDAARGOS_311)
ATGGGTCCTGGTGACTCCCCCTACTCAGGAGGTGTTTTCTTCCTGAACAT
CCACTTCCCCACCGACTACCCATTCAAGCCCCCGAAGGTCAACTTCACCA
CCCGGATTTACCACCCCAACATCAACGCCAACGGCAGCATCTGTCTTGAC
ATTCTCAGAGACCAGTGGAGTCCTGCTCTCACGATCTCCAAGGTGCTCCT
TTCGATCTGCTCTATGCTCACAGACCCCAACCCCGACGACCCGTTGGTGC
CGGAAATCGCTCACGTGTACAAGACGGACCGTCCCCGGTACGAAGCGACC
GCGCGGGAATGGACTCGCAAATATGCCATCTGAATGGGTCCTGGTGACTC
CCCCTACTCAGGAGGTGTTTTCTTCCTGAACATCCACTTCCCCACCGACT
ACCCATTCAAGCCCCCGAAGGTCAACTTCACCACCCGGATTTACCACCCC
AACATCAACGCCAACGGCAGCATCTGTCTTGACATTCTCAGAGACCAGTG
GAGTCCTGCTCTCACGATCTCCAAGGTGCTCCTTTCGATCTGCTCTATGC
TCACAGACCCCAACCCCGACGACCCGTTGGTGCCGGAAATCGCTCACGTG
TACAAGACGGACCGTCCCCGGTACGAAGCGACCGCGCGGGAATGGACTCG
CAAATATGCCATCTGAATGGGTCCTGGTGACTCCCCCTACTCAGGAGGTG
TTTTCTTCCTGAACATCCACTTCCCCACCGACTACCCATTCAAGCCCCCG
AAGGTCAACTTCACCACCCGGATTTACCACCCCAACATCAACGCCAACGG
CAGCATCTGTCTTGACATTCTCAGAGACCAGTGGAGTCCTGCTCTCACGA
TCTCCAAGGTGCTCCTTTCGATCTGCTCTATGCTCACAGACCCCAACCCC
GACGACCCGTTGGTGCCGGAAATCGCTCACGTGTACAAGACGGACCGTCC
CCGGTACGAAGCGACCGCGCGGGAATGGACTCGCAAATATGCCATCTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
UBC1CAN33_25950Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_25950-T1.exon1CAN33_25950-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_25950-T1.exon2CAN33_25950-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_25950-T1.exon3CAN33_25950-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_25950-T1.cdsCAN33_25950-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_25950-T1CAN33_25950-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR023313
DBxrefInterPro:IPR000608
DBxrefInterPro:IPR016135
DBxrefPFAM:PF00179
ProductUbiquitin-conjugating enzyme E2 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:2585777..2586291 +
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