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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:2653243..2655349+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_26060-T1 ID=CAN33_26060-T1|Name=CAN33_26060-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2107bp|location=Sequence derived from alignment at NKJJ01000002.1:2653243..2655349+ (Aspergillus niger FDAARGOS_311)
ATGGCTCCACGACGACACAATATCGGTGCTAGTCGCCGCCGAAGAAGAGA
CGAAGAGGGCGAAGATGAGGGCTCACTAGATGGAGAATTGGAGGACGACT
CCCTAAGCGAAGGGTCCATTATCAGCCATCCCGACGAGGAGGATGCCGAT
GGCGAGGGCAGTGATGAGAGTGATGACGAGGCGTCTGTGACCCGGGATGC
GGGCAATACTCACCTTCCCCAGCTCAACGGTCGTACGCCCGCAGGAAGCC
AGAAGCTCGGGCGCCGCCATTCTACCTCGCCCGGGAAACGCCACACGGGA
ACGGTCATGTCAGATACAGAAGCGATGATGAACGGGATGAGTCTGTCGGA
CAAGACGACTGGGGTGGCCGAAATCCACTTTGATGATCTGAAGGGGGAGC
TTGGCCAACAGACTGGGAGAACTCCGTCGGCGCCTCCGGCAGAGCCAAAA
CAAGACAGCCTGACGGAGAGGAGGCGTCGTGACAATGAGAAGTATACAAA
GGAAAAGGAAGAGAACCCAGCGTTCGTCCCCACCCGAGGAAGCTTCTTCC
TTCACGACAAACGTTCGACCGATAATGCGGCCAACGGTCACAAACCATTT
GCCAAGTCCAAGTCGAGACCATACGGTCTCATCGTGGACGGCAATGTGCG
CAAGTACGCTTGAACCAACCCTCTAGCTCTTTCACTGGTGAAGCAATCCG
AACATCCACGCTAACAGCTTGCAGGAACCAGGTCAAATCAGATGCCAGTG
AAAACAAGTGGACGCACGATCTGCATGATACTGTTGCTGGAGATGATGCA
CCCGTCTCGAAAGTGCCTGCGGTGCCTGCGACTGTCCCAACCTATCCCCC
GAAGCCAGTCCCTACAGCTCCTCGATCGTCCCCGCCCAATAGGTCGTTCT
CGAGTACTACAATGATAGGGAACGTACCTGTCGTGGTCTATTTACCGGGC
ATGGCTCAGCCTATCTCATACCCTAATGTTCCAAAGAAGCAACACACCCG
TTTACCACAACACCGTCCTCCTCTGCGCCGCGATAAGCCCGTCCGAATCT
CGCTTCCCGGGCAGCCTGCGCGATATATCTTCCCCGCGACAGAGCGATCT
TTCATCTTCATCCCGCGGGCGCTCCGGCCTAATCAACAGGCCTTCCGTGG
GCGTCGGAGCGGATTCTTCCCAGGACGTCGGCCTAGTATCTATGCAGGTT
CCACATACACTCCAAGCGTTAGCATCAGTAGGAGGTCGTCTTTCGGCAAG
GCGCCCTCCCAAGAAGGATACCACTCGCCGGCCGCCTCGGTCCTCTCCAG
GCAGACGATCGTGGCCACAGACAACGGTAAGCCCGTTGTCCGTTTACCTC
CACCTCCAAGACCAACAGCCGGACTACCACCCCCACCACCCGGCCCTCCA
TCAGCAGTTCCTCCTCTTCAACCACAGCCTCAACCTCCAGTGTTCCGGGA
GAGCCGTCCGGCGCCCATCCCGATGCACCAACCTCGTCCCCAAAAGGCCG
TCTCTGTTGCCGACATTGAGACCCCAGCAAGCTTTCCATTCAATCCTCCT
CAGCCGCAGCAGGAGCAGCCATTCCATCATCAGGTCCCAATGCCTGGAAC
TGGGCCCGTCTATGGCTCAGATGCGCCCGGCTATGCTGCTTCGGCTCACT
CGTCGGTGACACCCTTATCCCACATACCCGAGCGTGCAATCCATGCCCAA
CCCTTCCAGCCATACGGCTATCAACAGCCACAAGCATTCTATCCCAATTC
TTACCCACCTGGCGCCATGTACTATTCTGTCACCGGGACCGAGTTCCCCC
CGTACAATGCAGCAGTGGGGCCCGGCACCTCTGTGCCTCCCTTCCCCCGG
GGCAGCAGGTGCCGTATATGGTGCCCGGTGCGCACACGTCGGGTGAGCAA
CCGGCTCAACCGGGCACAGTGGCACACGAAGCAGGTGGTACGGTGTATTT
CTACGATGCTAACCAGATGTATCAAAACTCCTCCTATGGGATGCCGAATG
CGCCCGGGGCCGGCGGTGTCATGGGCATGGGCGGCATGATGACGCCCCCT
GGTATAACGTACTACTATCCTCAGTCTCAAGGCAGTGTCTACTACGGCTC
TCAGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:2653243..2655349+ >CAN33_26060-T1 ID=CAN33_26060-T1|Name=CAN33_26060-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=7608bp|location=Sequence derived from alignment at NKJJ01000002.1:2653243..2655349+ (Aspergillus niger FDAARGOS_311)
ATGGCTCCACGACGACACAATATCGGTGCTAGTCGCCGCCGAAGAAGAGA
CGAAGAGGGCGAAGATGAGGGCTCACTAGATGGAGAATTGGAGGACGACT
CCCTAAGCGAAGGGTCCATTATCAGCCATCCCGACGAGGAGGATGCCGAT
GGCGAGGGCAGTGATGAGAGTGATGACGAGGCGTCTGTGACCCGGGATGC
GGGCAATACTCACCTTCCCCAGCTCAACGGTCGTACGCCCGCAGGAAGCC
AGAAGCTCGGGCGCCGCCATTCTACCTCGCCCGGGAAACGCCACACGGGA
ACGGTCATGTCAGATACAGAAGCGATGATGAACGGGATGAGTCTGTCGGA
CAAGACGACTGGGGTGGCCGAAATCCACTTTGATGATCTGAAGGGGGAGC
TTGGCCAACAGACTGGGAGAACTCCGTCGGCGCCTCCGGCAGAGCCAAAA
CAAGACAGCCTGACGGAGAGGAGGCGTCGTGACAATGAGAAGTATACAAA
GGAAAAGGAAGAGAACCCAGCGTTCGTCCCCACCCGAGGAAGCTTCTTCC
TTCACGACAAACGTTCGACCGATAATGCGGCCAACGGTCACAAACCATTT
GCCAAGTCCAAGTCGAGACCATACGGTCTCATCGTGGACGGCAATGTGCG
CAAGAACCAGGTCAAATCAGATGCCAGTGAAAACAAGTGGACGCACGATC
TGCATGATACTGTTGCTGGAGATGATGCACCCGTCTCGAAAGTGCCTGCG
GTGCCTGCGACTGTCCCAACCTATCCCCCGAAGCCAGTCCCTACAGCTCC
TCGATCGTCCCCGCCCAATAGGTCGTTCTCGAGTACTACAATGATAGGGA
ACGTACCTGTCGTGGTCTATTTACCGGGCATGGCTCAGCCTATCTCATAC
CCTAATGTTCCAAAGAAGCAACACACCCGTTTACCACAACACCGTCCTCC
TCTGCGCCGCGATAAGCCCGTCCGAATCTCGCTTCCCGGGCAGCCTGCGC
GATATATCTTCCCCGCGACAGAGCGATCTTTCATCTTCATCCCGCGGGCG
CTCCGGCCTAATCAACAGGCCTTCCGTGGGCGTCGGAGCGGATTCTTCCC
AGGACGTCGGCCTAGTATCTATGCAGGTTCCACATACACTCCAAGCGTTA
GCATCAGTAGGAGGTCGTCTTTCGGCAAGGCGCCCTCCCAAGAAGGATAC
CACTCGCCGGCCGCCTCGGTCCTCTCCAGGCAGACGATCGTGGCCACAGA
CAACGCAGTTCCTCCTCTTCAACCACAGCCTCAACCTCCAGTGTTCCGGG
AGAGCCGTCCGGCGCCCATCCCGATGCACCAACCTCGTCCCCAAAAGGCC
GTCTCTGTTGCCGACATTGAGACCCCAGCAAGCTTTCCATTCAATCCTCC
TCAGCCGCAGCAGGAGCAGCCATTCCATCATCAGGTCCCAATGCCTGGAA
CTGGGCCCGTCTATGGCTCAGATGCGCCCGGCTATGCTGCTTCGGCTCAC
TCGTCGGTGACACCCTTATCCCACATACCCGAGCGTGCAATCCATGCCCA
ACCCTTCCAGCCATACGGCTATCAACAGCCACAAGCATTCTATCCCAATT
CTTACCCACCTGGCGCCATGTACTATTCTGTCACCGGGACCGAGTTCCCC
CCGTACAATGCAGCAGTGGGGCCCGGCACCTCTGTGCCTCCCTTCCCCCG
GGGCAGCAGGTGCCTGGCACACGAAGCAGGTGGTACGGTGTATTTCTACG
ATGCTAACCAGATGTATCAAAACTCCTCCTATGGGATGCCGAATGCGCCC
GGGGCCGGCGGTGTCATGGGCATGGGCGGCATGATGACGCCCCCTGGTAT
AACGTACTACTATCCTCAGTCTCAAGGCAGTGTCTACTACGGCTCTCAGT
GAATGGCTCCACGACGACACAATATCGGTGCTAGTCGCCGCCGAAGAAGA
GACGAAGAGGGCGAAGATGAGGGCTCACTAGATGGAGAATTGGAGGACGA
CTCCCTAAGCGAAGGGTCCATTATCAGCCATCCCGACGAGGAGGATGCCG
ATGGCGAGGGCAGTGATGAGAGTGATGACGAGGCGTCTGTGACCCGGGAT
GCGGGCAATACTCACCTTCCCCAGCTCAACGGTCGTACGCCCGCAGGAAG
CCAGAAGCTCGGGCGCCGCCATTCTACCTCGCCCGGGAAACGCCACACGG
GAACGGTCATGTCAGATACAGAAGCGATGATGAACGGGATGAGTCTGTCG
GACAAGACGACTGGGGTGGCCGAAATCCACTTTGATGATCTGAAGGGGGA
GCTTGGCCAACAGACTGGGAGAACTCCGTCGGCGCCTCCGGCAGAGCCAA
AACAAGACAGCCTGACGGAGAGGAGGCGTCGTGACAATGAGAAGTATACA
AAGGAAAAGGAAGAGAACCCAGCGTTCGTCCCCACCCGAGGAAGCTTCTT
CCTTCACGACAAACGTTCGACCGATAATGCGGCCAACGGTCACAAACCAT
TTGCCAAGTCCAAGTCGAGACCATACGGTCTCATCGTGGACGGCAATGTG
CGCAAGAACCAGGTCAAATCAGATGCCAGTGAAAACAAGTGGACGCACGA
TCTGCATGATACTGTTGCTGGAGATGATGCACCCGTCTCGAAAGTGCCTG
CGGTGCCTGCGACTGTCCCAACCTATCCCCCGAAGCCAGTCCCTACAGCT
CCTCGATCGTCCCCGCCCAATAGGTCGTTCTCGAGTACTACAATGATAGG
GAACGTACCTGTCGTGGTCTATTTACCGGGCATGGCTCAGCCTATCTCAT
ACCCTAATGTTCCAAAGAAGCAACACACCCGTTTACCACAACACCGTCCT
CCTCTGCGCCGCGATAAGCCCGTCCGAATCTCGCTTCCCGGGCAGCCTGC
GCGATATATCTTCCCCGCGACAGAGCGATCTTTCATCTTCATCCCGCGGG
CGCTCCGGCCTAATCAACAGGCCTTCCGTGGGCGTCGGAGCGGATTCTTC
CCAGGACGTCGGCCTAGTATCTATGCAGGTTCCACATACACTCCAAGCGT
TAGCATCAGTAGGAGGTCGTCTTTCGGCAAGGCGCCCTCCCAAGAAGGAT
ACCACTCGCCGGCCGCCTCGGTCCTCTCCAGGCAGACGATCGTGGCCACA
GACAACGCAGTTCCTCCTCTTCAACCACAGCCTCAACCTCCAGTGTTCCG
GGAGAGCCGTCCGGCGCCCATCCCGATGCACCAACCTCGTCCCCAAAAGG
CCGTCTCTGTTGCCGACATTGAGACCCCAGCAAGCTTTCCATTCAATCCT
CCTCAGCCGCAGCAGGAGCAGCCATTCCATCATCAGGTCCCAATGCCTGG
AACTGGGCCCGTCTATGGCTCAGATGCGCCCGGCTATGCTGCTTCGGCTC
ACTCGTCGGTGACACCCTTATCCCACATACCCGAGCGTGCAATCCATGCC
CAACCCTTCCAGCCATACGGCTATCAACAGCCACAAGCATTCTATCCCAA
TTCTTACCCACCTGGCGCCATGTACTATTCTGTCACCGGGACCGAGTTCC
CCCCGTACAATGCAGCAGTGGGGCCCGGCACCTCTGTGCCTCCCTTCCCC
CGGGGCAGCAGGTGCCTGGCACACGAAGCAGGTGGTACGGTGTATTTCTA
CGATGCTAACCAGATGTATCAAAACTCCTCCTATGGGATGCCGAATGCGC
CCGGGGCCGGCGGTGTCATGGGCATGGGCGGCATGATGACGCCCCCTGGT
ATAACGTACTACTATCCTCAGTCTCAAGGCAGTGTCTACTACGGCTCTCA
GTGAATGGCTCCACGACGACACAATATCGGTGCTAGTCGCCGCCGAAGAA
GAGACGAAGAGGGCGAAGATGAGGGCTCACTAGATGGAGAATTGGAGGAC
GACTCCCTAAGCGAAGGGTCCATTATCAGCCATCCCGACGAGGAGGATGC
CGATGGCGAGGGCAGTGATGAGAGTGATGACGAGGCGTCTGTGACCCGGG
ATGCGGGCAATACTCACCTTCCCCAGCTCAACGGTCGTACGCCCGCAGGA
AGCCAGAAGCTCGGGCGCCGCCATTCTACCTCGCCCGGGAAACGCCACAC
GGGAACGGTCATGTCAGATACAGAAGCGATGATGAACGGGATGAGTCTGT
CGGACAAGACGACTGGGGTGGCCGAAATCCACTTTGATGATCTGAAGGGG
GAGCTTGGCCAACAGACTGGGAGAACTCCGTCGGCGCCTCCGGCAGAGCC
AAAACAAGACAGCCTGACGGAGAGGAGGCGTCGTGACAATGAGAAGTATA
CAAAGGAAAAGGAAGAGAACCCAGCGTTCGTCCCCACCCGAGGAAGCTTC
TTCCTTCACGACAAACGTTCGACCGATAATGCGGCCAACGGTCACAAACC
ATTTGCCAAGTCCAAGTCGAGACCATACGGTCTCATCGTGGACGGCAATG
TGCGCAAGAACCAGGTCAAATCAGATGCCAGTGAAAACAAGTGGACGCAC
GATCTGCATGATACTGTTGCTGGAGATGATGCACCCGTCTCGAAAGTGCC
TGCGGTGCCTGCGACTGTCCCAACCTATCCCCCGAAGCCAGTCCCTACAG
CTCCTCGATCGTCCCCGCCCAATAGGTCGTTCTCGAGTACTACAATGATA
GGGAACGTACCTGTCGTGGTCTATTTACCGGGCATGGCTCAGCCTATCTC
ATACCCTAATGTTCCAAAGAAGCAACACACCCGTTTACCACAACACCGTC
CTCCTCTGCGCCGCGATAAGCCCGTCCGAATCTCGCTTCCCGGGCAGCCT
GCGCGATATATCTTCCCCGCGACAGAGCGATCTTTCATCTTCATCCCGCG
GGCGCTCCGGCCTAATCAACAGGCCTTCCGTGGGCGTCGGAGCGGATTCT
TCCCAGGACGTCGGCCTAGTATCTATGCAGGTTCCACATACACTCCAAGC
GTTAGCATCAGTAGGAGGTCGTCTTTCGGCAAGGCGCCCTCCCAAGAAGG
ATACCACTCGCCGGCCGCCTCGGTCCTCTCCAGGCAGACGATCGTGGCCA
CAGACAACGCAGTTCCTCCTCTTCAACCACAGCCTCAACCTCCAGTGTTC
CGGGAGAGCCGTCCGGCGCCCATCCCGATGCACCAACCTCGTCCCCAAAA
GGCCGTCTCTGTTGCCGACATTGAGACCCCAGCAAGCTTTCCATTCAATC
CTCCTCAGCCGCAGCAGGAGCAGCCATTCCATCATCAGGTCCCAATGCCT
GGAACTGGGCCCGTCTATGGCTCAGATGCGCCCGGCTATGCTGCTTCGGC
TCACTCGTCGGTGACACCCTTATCCCACATACCCGAGCGTGCAATCCATG
CCCAACCCTTCCAGCCATACGGCTATCAACAGCCACAAGCATTCTATCCC
AATTCTTACCCACCTGGCGCCATGTACTATTCTGTCACCGGGACCGAGTT
CCCCCCGTACAATGCAGCAGTGGGGCCCGGCACCTCTGTGCCTCCCTTCC
CCCGGGGCAGCAGGTGCCTGGCACACGAAGCAGGTGGTACGGTGTATTTC
TACGATGCTAACCAGATGTATCAAAACTCCTCCTATGGGATGCCGAATGC
GCCCGGGGCCGGCGGTGTCATGGGCATGGGCGGCATGATGACGCCCCCTG
GTATAACGTACTACTATCCTCAGTCTCAAGGCAGTGTCTACTACGGCTCT
CAGTGAATGGCTCCACGACGACACAATATCGGTGCTAGTCGCCGCCGAAG
AAGAGACGAAGAGGGCGAAGATGAGGGCTCACTAGATGGAGAATTGGAGG
ACGACTCCCTAAGCGAAGGGTCCATTATCAGCCATCCCGACGAGGAGGAT
GCCGATGGCGAGGGCAGTGATGAGAGTGATGACGAGGCGTCTGTGACCCG
GGATGCGGGCAATACTCACCTTCCCCAGCTCAACGGTCGTACGCCCGCAG
GAAGCCAGAAGCTCGGGCGCCGCCATTCTACCTCGCCCGGGAAACGCCAC
ACGGGAACGGTCATGTCAGATACAGAAGCGATGATGAACGGGATGAGTCT
GTCGGACAAGACGACTGGGGTGGCCGAAATCCACTTTGATGATCTGAAGG
GGGAGCTTGGCCAACAGACTGGGAGAACTCCGTCGGCGCCTCCGGCAGAG
CCAAAACAAGACAGCCTGACGGAGAGGAGGCGTCGTGACAATGAGAAGTA
TACAAAGGAAAAGGAAGAGAACCCAGCGTTCGTCCCCACCCGAGGAAGCT
TCTTCCTTCACGACAAACGTTCGACCGATAATGCGGCCAACGGTCACAAA
CCATTTGCCAAGTCCAAGTCGAGACCATACGGTCTCATCGTGGACGGCAA
TGTGCGCAAGAACCAGGTCAAATCAGATGCCAGTGAAAACAAGTGGACGC
ACGATCTGCATGATACTGTTGCTGGAGATGATGCACCCGTCTCGAAAGTG
CCTGCGGTGCCTGCGACTGTCCCAACCTATCCCCCGAAGCCAGTCCCTAC
AGCTCCTCGATCGTCCCCGCCCAATAGGTCGTTCTCGAGTACTACAATGA
TAGGGAACGTACCTGTCGTGGTCTATTTACCGGGCATGGCTCAGCCTATC
TCATACCCTAATGTTCCAAAGAAGCAACACACCCGTTTACCACAACACCG
TCCTCCTCTGCGCCGCGATAAGCCCGTCCGAATCTCGCTTCCCGGGCAGC
CTGCGCGATATATCTTCCCCGCGACAGAGCGATCTTTCATCTTCATCCCG
CGGGCGCTCCGGCCTAATCAACAGGCCTTCCGTGGGCGTCGGAGCGGATT
CTTCCCAGGACGTCGGCCTAGTATCTATGCAGGTTCCACATACACTCCAA
GCGTTAGCATCAGTAGGAGGTCGTCTTTCGGCAAGGCGCCCTCCCAAGAA
GGATACCACTCGCCGGCCGCCTCGGTCCTCTCCAGGCAGACGATCGTGGC
CACAGACAACGCAGTTCCTCCTCTTCAACCACAGCCTCAACCTCCAGTGT
TCCGGGAGAGCCGTCCGGCGCCCATCCCGATGCACCAACCTCGTCCCCAA
AAGGCCGTCTCTGTTGCCGACATTGAGACCCCAGCAAGCTTTCCATTCAA
TCCTCCTCAGCCGCAGCAGGAGCAGCCATTCCATCATCAGGTCCCAATGC
CTGGAACTGGGCCCGTCTATGGCTCAGATGCGCCCGGCTATGCTGCTTCG
GCTCACTCGTCGGTGACACCCTTATCCCACATACCCGAGCGTGCAATCCA
TGCCCAACCCTTCCAGCCATACGGCTATCAACAGCCACAAGCATTCTATC
CCAATTCTTACCCACCTGGCGCCATGTACTATTCTGTCACCGGGACCGAG
TTCCCCCCGTACAATGCAGCAGTGGGGCCCGGCACCTCTGTGCCTCCCTT
CCCCCGGGGCAGCAGGTGCCTGGCACACGAAGCAGGTGGTACGGTGTATT
TCTACGATGCTAACCAGATGTATCAAAACTCCTCCTATGGGATGCCGAAT
GCGCCCGGGGCCGGCGGTGTCATGGGCATGGGCGGCATGATGACGCCCCC
TGGTATAACGTACTACTATCCTCAGTCTCAAGGCAGTGTCTACTACGGCT
CTCAGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR018545 |
| DBxref | PFAM:PF09405 |
| Product | CASC3/Barentsz eIF4AIII binding family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:2653243..2655349 + |
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