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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:2781746..2783302- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_26245-T1 ID=CAN33_26245-T1|Name=CAN33_26245-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1557bp|location=Sequence derived from alignment at NKJJ01000002.1:2781746..2783302- (Aspergillus niger FDAARGOS_311)
ATGGAGCTGATGATCCCGTATCCGGACTTGCCATACCAACAACCTCCGCA
TGCCCCAAATCTCGAGCTAGCCGAGACTCCAGCAGCTGGATTTTTGAGAG
TCTGGACCAACGAGCATGGTTTATTCAACCCCAGCTCGATAGAATATGTT
CAACGCGCCGTGGATATGCGCTCGATGTTTCGTGCGGTCTGCTGCTAGGA
TTGGCTCCAATCCGCGTCTGTTTCTACAACATCGCGGTCTAAAGACTGGT
CTGCTATACCTCCTTCATATCTATTTCTGTTTCACCGTCTAGGAAGGAAC
TGACGTGGTCCGAGGCAGATTCCTCAGGCCTTTCACAAGCCCTATTAGCA
CGCGCTCGTTCTTTGACCAGTGAACATTCCACACTCTCCGCCCATTTGGC
TGAGGTATTTGATGCGAAACTCGCCAAGCGAGTGGGTGAACTCGCACCAA
TTGCGAGTACCTTGAAAGAGTGGGAACACGCAAATAGTGTATGTATTTCT
CCAATGTATTCCTGTATTCAGCTCTATTGACATTTTGCAGTCTATATCGG
AACTTTTGTCCCTGCTTGATGACCCAGAAACCGATGCTGAGCTGAGGTCG
CTTGCAGTTGAAGACCTGGAGAGCAGCAAGATCGCGCTGCCTGCCATAGC
GGATAATTTAAAGAAGGCTCTTATACCTCGCCACCCTTTCGCAGACCTCC
CATGCTTGCTCGAAATACGCCCCGGCGCAGGTGGGGACGAGGCTGGCCTT
TTTGCTTTCGAGGTATTGAGAATGTATATCGCCTTCTGTTCACGTCGTGG
TTTCAGGTATAGCATCATAAAACAGGATGTTGCAGACGGCCCTGCGCAAG
ACCGATTGAGTGAAGCGGTCCTGGAAGTTGACGCGGATGGGGCCTATGAC
ATCCTGAGAACAGAGTCGGGAGTTCATAGAGTACAGAGGGTTCCCGCTAC
CGAGGCCAAGGGCCGCACACATACCAGTGCCGTTAGTGTGATGATACTTC
CTAGTTTTCCAGACTCCGGGAGTGGCCTTGATAGTTCACTCAATTTTGAG
GACCCAAACAGTGACTACTATGTGGATCCTCAAGAGGTTCGCACAGAGAA
GATGCGAGCCGGTGGCGCAGGCGGTCAGCATGTCAATAAAACCGAGTCAG
CTATTCGGTTGACCCATATACCAACGGGTACCGTTGTCTCTATGCAAGAT
TCACGTTCCCAACATGCCAATCGGAAGAAGGCTTGGCAGGTTTTGCGGGC
GAGATTAGCTGAAGCAAGACGAGAAGCCCGAGAACAGGAATTGGTTAACC
TAAGGAGAGGAGCAATGGGCGGTGTTGCTCGAATGGGACGCGGTGACAAG
ATCCGAACTTACAATTACGGTCAGAATCGCTGCACAGACCATCGCAGCGG
CCTCACCATACATAACCTGGATAGTGTTCTTGATGGTGGTGAAGGCCTAG
AAACCGTAATGGATAGCGTACGGACATGGCTCGTCGAGCGCGAAATAGAG
GCCATGGCTGCTGAAGAATCAGTCCAAGACAAAGAAGGGCTGCGTGCCCA
ACTGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:2781746..2783302- >CAN33_26245-T1 ID=CAN33_26245-T1|Name=CAN33_26245-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4131bp|location=Sequence derived from alignment at NKJJ01000002.1:2781746..2783302- (Aspergillus niger FDAARGOS_311)
TCTATATCGGAACTTTTGTCCCTGCTTGATGACCCAGAAACCGATGCTGA
GCTGAGGTCGCTTGCAGTTGAAGACCTGGAGAGCAGCAAGATCGCGCTGC
CTGCCATAGCGGATAATTTAAAGAAGGCTCTTATACCTCGCCACCCTTTC
GCAGACCTCCCATGCTTGCTCGAAATACGCCCCGGCGCAGGTGGGGACGA
GGCTGGCCTTTTTGCTTTCGAGGTATTGAGAATGTATATCGCCTTCTGTT
CACGTCGTGGTTTCAGGTATAGCATCATAAAACAGGATGTTGCAGACGGC
CCTGCGCAAGACCGATTGAGTGAAGCGGTCCTGGAAGTTGACGCGGATGG
GGCCTATGACATCCTGAGAACAGAGTCGGGAGTTCATAGAGTACAGAGGG
TTCCCGCTACCGAGGCCAAGGGCCGCACACATACCAGTGCCGTTAGTGTG
ATGATACTTCCTAGTTTTCCAGACTCCGGGAGTGGCCTTGATAGTTCACT
CAATTTTGAGGACCCAAACAGTGACTACTATGTGGATCCTCAAGAGGTTC
GCACAGAGAAGATGCGAGCCGGTGGCGCAGGCGGTCAGCATGTCAATAAA
ACCGAGTCAGCTATTCGGTTGACCCATATACCAACGGGTACCGTTGTCTC
TATGCAAGATTCACGTTCCCAACATGCCAATCGGAAGAAGGCTTGGCAGG
TTTTGCGGGCGAGATTAGCTGAAGCAAGACGAGAAGCCCGAGAACAGGAA
TTGGTTAACCTAAGGAGAGGAGCAATGGGCGGTGTTGCTCGAATGGGACG
CGGTGACAAGATCCGAACTTACAATTACGGTCAGAATCGCTGCACAGACC
ATCGCAGCGGCCTCACCATACATAACCTGGATAGTGTTCTTGATGGTGGT
GAAGGCCTAGAAACCGTAATGGATAGCGTACGGACATGGCTCGTCGAGCG
CGAAATAGAGGCCATGGCTGCTGAAGAATCAGTCCAAGACAAAGAAGGGC
TGCGTGCCCAACTGTGAGCAGATTCCTCAGGCCTTTCACAAGCCCTATTA
GCACGCGCTCGTTCTTTGACCAGTGAACATTCCACACTCTCCGCCCATTT
GGCTGAGGTATTTGATGCGAAACTCGCCAAGCGAGTGGGTGAACTCGCAC
CAATTGCGAGTACCTTGAAAGAGTGGGAACACGCAAATAGTATGGAGCTG
ATGATCCCGTATCCGGACTTGCCATACCAACAACCTCCGCATGCCCCAAA
TCTCGAGCTAGCCGAGACTCCAGCAGCTGGATTTTTGAGAGTCTGGACCA
ACGAGCATGGTTTATTCAACCCCAGCTCGATAGAATATGTTCAACGCGCC
GTGGATATGCGCTCGATGTTTCGTGCGTCTATATCGGAACTTTTGTCCCT
GCTTGATGACCCAGAAACCGATGCTGAGCTGAGGTCGCTTGCAGTTGAAG
ACCTGGAGAGCAGCAAGATCGCGCTGCCTGCCATAGCGGATAATTTAAAG
AAGGCTCTTATACCTCGCCACCCTTTCGCAGACCTCCCATGCTTGCTCGA
AATACGCCCCGGCGCAGGTGGGGACGAGGCTGGCCTTTTTGCTTTCGAGG
TATTGAGAATGTATATCGCCTTCTGTTCACGTCGTGGTTTCAGGTATAGC
ATCATAAAACAGGATGTTGCAGACGGCCCTGCGCAAGACCGATTGAGTGA
AGCGGTCCTGGAAGTTGACGCGGATGGGGCCTATGACATCCTGAGAACAG
AGTCGGGAGTTCATAGAGTACAGAGGGTTCCCGCTACCGAGGCCAAGGGC
CGCACACATACCAGTGCCGTTAGTGTGATGATACTTCCTAGTTTTCCAGA
CTCCGGGAGTGGCCTTGATAGTTCACTCAATTTTGAGGACCCAAACAGTG
ACTACTATGTGGATCCTCAAGAGGTTCGCACAGAGAAGATGCGAGCCGGT
GGCGCAGGCGGTCAGCATGTCAATAAAACCGAGTCAGCTATTCGGTTGAC
CCATATACCAACGGGTACCGTTGTCTCTATGCAAGATTCACGTTCCCAAC
ATGCCAATCGGAAGAAGGCTTGGCAGGTTTTGCGGGCGAGATTAGCTGAA
GCAAGACGAGAAGCCCGAGAACAGGAATTGGTTAACCTAAGGAGAGGAGC
AATGGGCGGTGTTGCTCGAATGGGACGCGGTGACAAGATCCGAACTTACA
ATTACGGTCAGAATCGCTGCACAGACCATCGCAGCGGCCTCACCATACAT
AACCTGGATAGTGTTCTTGATGGTGGTGAAGGCCTAGAAACCGTAATGGA
TAGCGTACGGACATGGCTCGTCGAGCGCGAAATAGAGGCCATGGCTGCTG
AAGAATCAGTCCAAGACAAAGAAGGGCTGCGTGCCCAACTGTGAGCAGAT
TCCTCAGGCCTTTCACAAGCCCTATTAGCACGCGCTCGTTCTTTGACCAG
TGAACATTCCACACTCTCCGCCCATTTGGCTGAGGTATTTGATGCGAAAC
TCGCCAAGCGAGTGGGTGAACTCGCACCAATTGCGAGTACCTTGAAAGAG
TGGGAACACGCAAATAGTATGGAGCTGATGATCCCGTATCCGGACTTGCC
ATACCAACAACCTCCGCATGCCCCAAATCTCGAGCTAGCCGAGACTCCAG
CAGCTGGATTTTTGAGAGTCTGGACCAACGAGCATGGTTTATTCAACCCC
AGCTCGATAGAATATGTTCAACGCGCCGTGGATATGCGCTCGATGTTTCG
TGCGTCTATATCGGAACTTTTGTCCCTGCTTGATGACCCAGAAACCGATG
CTGAGCTGAGGTCGCTTGCAGTTGAAGACCTGGAGAGCAGCAAGATCGCG
CTGCCTGCCATAGCGGATAATTTAAAGAAGGCTCTTATACCTCGCCACCC
TTTCGCAGACCTCCCATGCTTGCTCGAAATACGCCCCGGCGCAGGTGGGG
ACGAGGCTGGCCTTTTTGCTTTCGAGGTATTGAGAATGTATATCGCCTTC
TGTTCACGTCGTGGTTTCAGGTATAGCATCATAAAACAGGATGTTGCAGA
CGGCCCTGCGCAAGACCGATTGAGTGAAGCGGTCCTGGAAGTTGACGCGG
ATGGGGCCTATGACATCCTGAGAACAGAGTCGGGAGTTCATAGAGTACAG
AGGGTTCCCGCTACCGAGGCCAAGGGCCGCACACATACCAGTGCCGTTAG
TGTGATGATACTTCCTAGTTTTCCAGACTCCGGGAGTGGCCTTGATAGTT
CACTCAATTTTGAGGACCCAAACAGTGACTACTATGTGGATCCTCAAGAG
GTTCGCACAGAGAAGATGCGAGCCGGTGGCGCAGGCGGTCAGCATGTCAA
TAAAACCGAGTCAGCTATTCGGTTGACCCATATACCAACGGGTACCGTTG
TCTCTATGCAAGATTCACGTTCCCAACATGCCAATCGGAAGAAGGCTTGG
CAGGTTTTGCGGGCGAGATTAGCTGAAGCAAGACGAGAAGCCCGAGAACA
GGAATTGGTTAACCTAAGGAGAGGAGCAATGGGCGGTGTTGCTCGAATGG
GACGCGGTGACAAGATCCGAACTTACAATTACGGTCAGAATCGCTGCACA
GACCATCGCAGCGGCCTCACCATACATAACCTGGATAGTGTTCTTGATGG
TGGTGAAGGCCTAGAAACCGTAATGGATAGCGTACGGACATGGCTCGTCG
AGCGCGAAATAGAGGCCATGGCTGCTGAAGAATCAGTCCAAGACAAAGAA
GGGCTGCGTGCCCAACTGTGAGCAGATTCCTCAGGCCTTTCACAAGCCCT
ATTAGCACGCGCTCGTTCTTTGACCAGTGAACATTCCACACTCTCCGCCC
ATTTGGCTGAGGTATTTGATGCGAAACTCGCCAAGCGAGTGGGTGAACTC
GCACCAATTGCGAGTACCTTGAAAGAGTGGGAACACGCAAATAGTATGGA
GCTGATGATCCCGTATCCGGACTTGCCATACCAACAACCTCCGCATGCCC
CAAATCTCGAGCTAGCCGAGACTCCAGCAGCTGGATTTTTGAGAGTCTGG
ACCAACGAGCATGGTTTATTCAACCCCAGCTCGATAGAATATGTTCAACG
CGCCGTGGATATGCGCTCGATGTTTCGTGCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003747 | translation release factor activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006415 | translational termination |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR000352 |
| DBxref | InterPro:IPR005139 |
| DBxref | PFAM:PF00472 |
| DBxref | PFAM:PF03462 |
| Product | RF-1 domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:2781746..2783302 - |
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