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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:2796724..2798758+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_26290-T1 ID=CAN33_26290-T1|Name=CAN33_26290-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2035bp|location=Sequence derived from alignment at NKJJ01000002.1:2796724..2798758+ (Aspergillus niger FDAARGOS_311)
ATGCAGCAAGAAGCGCGCAACACTGAAGGACGCAGCCTATGGAGGACAGG
TGCCTCACTACGCCACCAAACAGTCCGTTTCGTGAGCGCCCGGGACATTA
ACCGGGAGAGTGAAACGCAAACCCCTCCCAGCACAATTGAGACTACCGCA
CAGGAAGAGAACCTGGAAACACTGGCGATCAAGAATTGCGACCAGCCGAC
GGCTACATTCTTGCCAGAGCGCAGGCCGGGAAACGAGGACCCATCCTTCT
GCGCCGAGTTAGTTGACAACCTCGAATCGACAGCGATATCGGATCCCCTA
GTTCATTCCACCACGCTGTCTCACGCGGATTCGAGTGAAGATGAGGTTGT
GTTTCGTGGCCGGAGATACCAGCATGGGGAACGCAGATCCCACCCCTCGG
AGATCCAGACGCAAAAGGTTGTCCCTATCGCCGGTAGTCAGCAACAAAGA
GCATCCGAGCCCAGCGAATCGGAAATCCCTTGCTCAAACTCCGAGCCCAA
CTCATTGCCCGCTCCCAAACCATCACAGACAAAAAACTGCCCCCAGGAAA
TGGACAGCCCAAGTTACATTTCGCTTGCCAGCGATAGGCGGCTGCGCAAA
AAATGGAAAAGAGACGACGATGACATACTCGCCGACTACATAGACAATAT
TGACAGCGAGTACTCGATACTGGGCAGTTCTCTACACCCTGTTAAAGCTC
AAGAACCAGACAATCCCGACAAGGTGGTACCAACGTCCGTTATGGGTTTG
AACTCCGCAGCTGAAAAGAATCTGCGCCCGAATGAGGATTCCGCTCAACG
CGGTAATATGACACTGGGCGATGAACAAGAGTGCGGCGAGAATGATAATT
TAGAGTGTAAGTGGAGTCAGAATGCAAATATTCCTTGGTCGTTTCGTCTG
TGGATGTTTACTAATCGGGCCAAGGTCACTACAACCATTGGAATCAAGAA
AAAAATCAAGAGGCATCGGTTGACCGAATATTCCGTACGAATGGCACCTC
ACCCGCTTCATCAGACGATACAGACACAGAGGACGTAGAAGAGGAAAATT
CTGAGGTAAGATACCTAAACATTCCAATTTCGCCAGACATCCCTCGAGAC
CTGGATCACCCTGAAATCTCCTTACTCACCCTATGCAGGAACTGCACACA
TATGACAACGGTTTCTTTGCGTCTGCGACGGCTTTTGCTGATGCACTGGA
ATTTGATCCCTACTATGGATTCGATATCATGGACTACAACCGACCAAGTG
TGAAAAAGAAGTCTAAAGGAAAGGGCCGTCCTTTGGATATCAATCTATCA
GACAGTGAACTTGAGTCTGAGCTGGTGAATGCCTGGCAAAACGACAGGGC
AAAGAAGAAGGCCAGGAAGCAAAAACGAGAAGAGCTACGCTCTCTGGGCC
TATTGGGCCGGGGCCGCCAAAACCCGTCCCTAAAAGACAAATATTCCAAT
GGAATAGGCAACGAGGACCTGAAAAGCGAAATTCGACATTTTCTCCTCTC
ACCAAAAGACAGGTACATATATCTACACTCCCAGTAAACTGAACTGCTCC
TGGTATATGATATCTGACACTGTCTCTGCAGCTTGGCTCTGCCTCCCATG
TCGAAGCAGCACCGCAAACTGGTCCACGAGCTGGCCAATGTTTTGTCTAT
GAAATCGCAATCTCGAGGCAAGGGATCCTCGAGGTTTCCCATCGTGCACA
AGACCTCTCGGACTCCTACATATACATCCAAAACCGTGTCTCAAATGGAT
CGGATCTTATCAAACGGGCGTGGCCAACGCGGGCTCAAACCCCGGGACTC
GAAGACGAGCAAGCCTAGCAAGTCGCGCCGCGGGCGAACCGATGCAACCG
TTTCCTACATGGATGGTGATGTCGTCGGAGGATCGGCACCTGAAATTGGT
GCCGAGAATAAGGGCAGGGCTATGCTTGAGAAAATGGGATGGAGTATTGG
CACCCCTCTTGGTTCTATGAATAATAAGGGTATTCTTCTACCTGTTGCAC
ATGTTGTGAAGAACTCGAGGGCTGGGTTAGGATAA back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:2796724..2798758+ >CAN33_26290-T1 ID=CAN33_26290-T1|Name=CAN33_26290-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=7260bp|location=Sequence derived from alignment at NKJJ01000002.1:2796724..2798758+ (Aspergillus niger FDAARGOS_311)
ATGCAGCAAGAAGCGCGCAACACTGAAGGACGCAGCCTATGGAGGACAGG
TGCCTCACTACGCCACCAAACAGTCCGTTTCGTGAGCGCCCGGGACATTA
ACCGGGAGAGTGAAACGCAAACCCCTCCCAGCACAATTGAGACTACCGCA
CAGGAAGAGAACCTGGAAACACTGGCGATCAAGAATTGCGACCAGCCGAC
GGCTACATTCTTGCCAGAGCGCAGGCCGGGAAACGAGGACCCATCCTTCT
GCGCCGAGTTAGTTGACAACCTCGAATCGACAGCGATATCGGATCCCCTA
GTTCATTCCACCACGCTGTCTCACGCGGATTCGAGTGAAGATGAGGTTGT
GTTTCGTGGCCGGAGATACCAGCATGGGGAACGCAGATCCCACCCCTCGG
AGATCCAGACGCAAAAGGTTGTCCCTATCGCCGGTAGTCAGCAACAAAGA
GCATCCGAGCCCAGCGAATCGGAAATCCCTTGCTCAAACTCCGAGCCCAA
CTCATTGCCCGCTCCCAAACCATCACAGACAAAAAACTGCCCCCAGGAAA
TGGACAGCCCAAGTTACATTTCGCTTGCCAGCGATAGGCGGCTGCGCAAA
AAATGGAAAAGAGACGACGATGACATACTCGCCGACTACATAGACAATAT
TGACAGCGAGTACTCGATACTGGGCAGTTCTCTACACCCTGTTAAAGCTC
AAGAACCAGACAATCCCGACAAGGTGGTACCAACGTCCGTTATGGGTTTG
AACTCCGCAGCTGAAAAGAATCTGCGCCCGAATGAGGATTCCGCTCAACG
CGGTAATATGACACTGGGCGATGAACAAGAGTGCGGCGAGAATGATAATT
TAGAGTGTCACTACAACCATTGGAATCAAGAAAAAAATCAAGAGGCATCG
GTTGACCGAATATTCCGTACGAATGGCACCTCACCCGCTTCATCAGACGA
TACAGACACAGAGGACGTAGAAGAGGAAAATTCTGAGGAACTGCACACAT
ATGACAACGGTTTCTTTGCGTCTGCGACGGCTTTTGCTGATGCACTGGAA
TTTGATCCCTACTATGGATTCGATATCATGGACTACAACCGACCAAGTGT
GAAAAAGAAGTCTAAAGGAAAGGGCCGTCCTTTGGATATCAATCTATCAG
ACAGTGAACTTGAGTCTGAGCTGGTGAATGCCTGGCAAAACGACAGGGCA
AAGAAGAAGGCCAGGAAGCAAAAACGAGAAGAGCTACGCTCTCTGGGCCT
ATTGGGCCGGGGCCGCCAAAACCCGTCCCTAAAAGACAAATATTCCAATG
GAATAGGCAACGAGGACCTGAAAAGCGAAATTCGACATTTTCTCCTCTCA
CCAAAAGACAGCTTGGCTCTGCCTCCCATGTCGAAGCAGCACCGCAAACT
GGTCCACGAGCTGGCCAATGTTTTGTCTATGAAATCGCAATCTCGAGGCA
AGGGATCCTCGAGGTTTCCCATCGTGCACAAGACCTCTCGGACTCCTACA
TATACATCCAAAACCGTGTCTCAAATGGATCGGATCTTATCAAACGGGCG
TGGCCAACGCGGGCTCAAACCCCGGGACTCGAAGACGAGCAAGCCTAGCA
AGTCGCGCCGCGGGCGAACCGATGCAACCGTTTCCTACATGGATGGTGAT
GTCGTCGGAGGATCGGCACCTGAAATTGGTGCCGAGAATAAGGGCAGGGC
TATGCTTGAGAAAATGGGATGGAGTATTGGCACCCCTCTTGGTTCTATGA
ATAATAAGGGTATTCTTCTACCTGTTGCACATGTTGTGAAGAACTCGAGG
GCTGGGTTAGGATAAATGCAGCAAGAAGCGCGCAACACTGAAGGACGCAG
CCTATGGAGGACAGGTGCCTCACTACGCCACCAAACAGTCCGTTTCGTGA
GCGCCCGGGACATTAACCGGGAGAGTGAAACGCAAACCCCTCCCAGCACA
ATTGAGACTACCGCACAGGAAGAGAACCTGGAAACACTGGCGATCAAGAA
TTGCGACCAGCCGACGGCTACATTCTTGCCAGAGCGCAGGCCGGGAAACG
AGGACCCATCCTTCTGCGCCGAGTTAGTTGACAACCTCGAATCGACAGCG
ATATCGGATCCCCTAGTTCATTCCACCACGCTGTCTCACGCGGATTCGAG
TGAAGATGAGGTTGTGTTTCGTGGCCGGAGATACCAGCATGGGGAACGCA
GATCCCACCCCTCGGAGATCCAGACGCAAAAGGTTGTCCCTATCGCCGGT
AGTCAGCAACAAAGAGCATCCGAGCCCAGCGAATCGGAAATCCCTTGCTC
AAACTCCGAGCCCAACTCATTGCCCGCTCCCAAACCATCACAGACAAAAA
ACTGCCCCCAGGAAATGGACAGCCCAAGTTACATTTCGCTTGCCAGCGAT
AGGCGGCTGCGCAAAAAATGGAAAAGAGACGACGATGACATACTCGCCGA
CTACATAGACAATATTGACAGCGAGTACTCGATACTGGGCAGTTCTCTAC
ACCCTGTTAAAGCTCAAGAACCAGACAATCCCGACAAGGTGGTACCAACG
TCCGTTATGGGTTTGAACTCCGCAGCTGAAAAGAATCTGCGCCCGAATGA
GGATTCCGCTCAACGCGGTAATATGACACTGGGCGATGAACAAGAGTGCG
GCGAGAATGATAATTTAGAGTGTCACTACAACCATTGGAATCAAGAAAAA
AATCAAGAGGCATCGGTTGACCGAATATTCCGTACGAATGGCACCTCACC
CGCTTCATCAGACGATACAGACACAGAGGACGTAGAAGAGGAAAATTCTG
AGGAACTGCACACATATGACAACGGTTTCTTTGCGTCTGCGACGGCTTTT
GCTGATGCACTGGAATTTGATCCCTACTATGGATTCGATATCATGGACTA
CAACCGACCAAGTGTGAAAAAGAAGTCTAAAGGAAAGGGCCGTCCTTTGG
ATATCAATCTATCAGACAGTGAACTTGAGTCTGAGCTGGTGAATGCCTGG
CAAAACGACAGGGCAAAGAAGAAGGCCAGGAAGCAAAAACGAGAAGAGCT
ACGCTCTCTGGGCCTATTGGGCCGGGGCCGCCAAAACCCGTCCCTAAAAG
ACAAATATTCCAATGGAATAGGCAACGAGGACCTGAAAAGCGAAATTCGA
CATTTTCTCCTCTCACCAAAAGACAGCTTGGCTCTGCCTCCCATGTCGAA
GCAGCACCGCAAACTGGTCCACGAGCTGGCCAATGTTTTGTCTATGAAAT
CGCAATCTCGAGGCAAGGGATCCTCGAGGTTTCCCATCGTGCACAAGACC
TCTCGGACTCCTACATATACATCCAAAACCGTGTCTCAAATGGATCGGAT
CTTATCAAACGGGCGTGGCCAACGCGGGCTCAAACCCCGGGACTCGAAGA
CGAGCAAGCCTAGCAAGTCGCGCCGCGGGCGAACCGATGCAACCGTTTCC
TACATGGATGGTGATGTCGTCGGAGGATCGGCACCTGAAATTGGTGCCGA
GAATAAGGGCAGGGCTATGCTTGAGAAAATGGGATGGAGTATTGGCACCC
CTCTTGGTTCTATGAATAATAAGGGTATTCTTCTACCTGTTGCACATGTT
GTGAAGAACTCGAGGGCTGGGTTAGGATAAATGCAGCAAGAAGCGCGCAA
CACTGAAGGACGCAGCCTATGGAGGACAGGTGCCTCACTACGCCACCAAA
CAGTCCGTTTCGTGAGCGCCCGGGACATTAACCGGGAGAGTGAAACGCAA
ACCCCTCCCAGCACAATTGAGACTACCGCACAGGAAGAGAACCTGGAAAC
ACTGGCGATCAAGAATTGCGACCAGCCGACGGCTACATTCTTGCCAGAGC
GCAGGCCGGGAAACGAGGACCCATCCTTCTGCGCCGAGTTAGTTGACAAC
CTCGAATCGACAGCGATATCGGATCCCCTAGTTCATTCCACCACGCTGTC
TCACGCGGATTCGAGTGAAGATGAGGTTGTGTTTCGTGGCCGGAGATACC
AGCATGGGGAACGCAGATCCCACCCCTCGGAGATCCAGACGCAAAAGGTT
GTCCCTATCGCCGGTAGTCAGCAACAAAGAGCATCCGAGCCCAGCGAATC
GGAAATCCCTTGCTCAAACTCCGAGCCCAACTCATTGCCCGCTCCCAAAC
CATCACAGACAAAAAACTGCCCCCAGGAAATGGACAGCCCAAGTTACATT
TCGCTTGCCAGCGATAGGCGGCTGCGCAAAAAATGGAAAAGAGACGACGA
TGACATACTCGCCGACTACATAGACAATATTGACAGCGAGTACTCGATAC
TGGGCAGTTCTCTACACCCTGTTAAAGCTCAAGAACCAGACAATCCCGAC
AAGGTGGTACCAACGTCCGTTATGGGTTTGAACTCCGCAGCTGAAAAGAA
TCTGCGCCCGAATGAGGATTCCGCTCAACGCGGTAATATGACACTGGGCG
ATGAACAAGAGTGCGGCGAGAATGATAATTTAGAGTGTCACTACAACCAT
TGGAATCAAGAAAAAAATCAAGAGGCATCGGTTGACCGAATATTCCGTAC
GAATGGCACCTCACCCGCTTCATCAGACGATACAGACACAGAGGACGTAG
AAGAGGAAAATTCTGAGGAACTGCACACATATGACAACGGTTTCTTTGCG
TCTGCGACGGCTTTTGCTGATGCACTGGAATTTGATCCCTACTATGGATT
CGATATCATGGACTACAACCGACCAAGTGTGAAAAAGAAGTCTAAAGGAA
AGGGCCGTCCTTTGGATATCAATCTATCAGACAGTGAACTTGAGTCTGAG
CTGGTGAATGCCTGGCAAAACGACAGGGCAAAGAAGAAGGCCAGGAAGCA
AAAACGAGAAGAGCTACGCTCTCTGGGCCTATTGGGCCGGGGCCGCCAAA
ACCCGTCCCTAAAAGACAAATATTCCAATGGAATAGGCAACGAGGACCTG
AAAAGCGAAATTCGACATTTTCTCCTCTCACCAAAAGACAGCTTGGCTCT
GCCTCCCATGTCGAAGCAGCACCGCAAACTGGTCCACGAGCTGGCCAATG
TTTTGTCTATGAAATCGCAATCTCGAGGCAAGGGATCCTCGAGGTTTCCC
ATCGTGCACAAGACCTCTCGGACTCCTACATATACATCCAAAACCGTGTC
TCAAATGGATCGGATCTTATCAAACGGGCGTGGCCAACGCGGGCTCAAAC
CCCGGGACTCGAAGACGAGCAAGCCTAGCAAGTCGCGCCGCGGGCGAACC
GATGCAACCGTTTCCTACATGGATGGTGATGTCGTCGGAGGATCGGCACC
TGAAATTGGTGCCGAGAATAAGGGCAGGGCTATGCTTGAGAAAATGGGAT
GGAGTATTGGCACCCCTCTTGGTTCTATGAATAATAAGGGTATTCTTCTA
CCTGTTGCACATGTTGTGAAGAACTCGAGGGCTGGGTTAGGATAAATGCA
GCAAGAAGCGCGCAACACTGAAGGACGCAGCCTATGGAGGACAGGTGCCT
CACTACGCCACCAAACAGTCCGTTTCGTGAGCGCCCGGGACATTAACCGG
GAGAGTGAAACGCAAACCCCTCCCAGCACAATTGAGACTACCGCACAGGA
AGAGAACCTGGAAACACTGGCGATCAAGAATTGCGACCAGCCGACGGCTA
CATTCTTGCCAGAGCGCAGGCCGGGAAACGAGGACCCATCCTTCTGCGCC
GAGTTAGTTGACAACCTCGAATCGACAGCGATATCGGATCCCCTAGTTCA
TTCCACCACGCTGTCTCACGCGGATTCGAGTGAAGATGAGGTTGTGTTTC
GTGGCCGGAGATACCAGCATGGGGAACGCAGATCCCACCCCTCGGAGATC
CAGACGCAAAAGGTTGTCCCTATCGCCGGTAGTCAGCAACAAAGAGCATC
CGAGCCCAGCGAATCGGAAATCCCTTGCTCAAACTCCGAGCCCAACTCAT
TGCCCGCTCCCAAACCATCACAGACAAAAAACTGCCCCCAGGAAATGGAC
AGCCCAAGTTACATTTCGCTTGCCAGCGATAGGCGGCTGCGCAAAAAATG
GAAAAGAGACGACGATGACATACTCGCCGACTACATAGACAATATTGACA
GCGAGTACTCGATACTGGGCAGTTCTCTACACCCTGTTAAAGCTCAAGAA
CCAGACAATCCCGACAAGGTGGTACCAACGTCCGTTATGGGTTTGAACTC
CGCAGCTGAAAAGAATCTGCGCCCGAATGAGGATTCCGCTCAACGCGGTA
ATATGACACTGGGCGATGAACAAGAGTGCGGCGAGAATGATAATTTAGAG
TGTCACTACAACCATTGGAATCAAGAAAAAAATCAAGAGGCATCGGTTGA
CCGAATATTCCGTACGAATGGCACCTCACCCGCTTCATCAGACGATACAG
ACACAGAGGACGTAGAAGAGGAAAATTCTGAGGAACTGCACACATATGAC
AACGGTTTCTTTGCGTCTGCGACGGCTTTTGCTGATGCACTGGAATTTGA
TCCCTACTATGGATTCGATATCATGGACTACAACCGACCAAGTGTGAAAA
AGAAGTCTAAAGGAAAGGGCCGTCCTTTGGATATCAATCTATCAGACAGT
GAACTTGAGTCTGAGCTGGTGAATGCCTGGCAAAACGACAGGGCAAAGAA
GAAGGCCAGGAAGCAAAAACGAGAAGAGCTACGCTCTCTGGGCCTATTGG
GCCGGGGCCGCCAAAACCCGTCCCTAAAAGACAAATATTCCAATGGAATA
GGCAACGAGGACCTGAAAAGCGAAATTCGACATTTTCTCCTCTCACCAAA
AGACAGCTTGGCTCTGCCTCCCATGTCGAAGCAGCACCGCAAACTGGTCC
ACGAGCTGGCCAATGTTTTGTCTATGAAATCGCAATCTCGAGGCAAGGGA
TCCTCGAGGTTTCCCATCGTGCACAAGACCTCTCGGACTCCTACATATAC
ATCCAAAACCGTGTCTCAAATGGATCGGATCTTATCAAACGGGCGTGGCC
AACGCGGGCTCAAACCCCGGGACTCGAAGACGAGCAAGCCTAGCAAGTCG
CGCCGCGGGCGAACCGATGCAACCGTTTCCTACATGGATGGTGATGTCGT
CGGAGGATCGGCACCTGAAATTGGTGCCGAGAATAAGGGCAGGGCTATGC
TTGAGAAAATGGGATGGAGTATTGGCACCCCTCTTGGTTCTATGAATAAT
AAGGGTATTCTTCTACCTGTTGCACATGTTGTGAAGAACTCGAGGGCTGG
GTTAGGATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR034082 |
| DBxref | InterPro:IPR036867 |
| DBxref | InterPro:IPR000467 |
| DBxref | InterPro:IPR001374 |
| DBxref | PFAM:PF01424 |
| DBxref | PFAM:PF01585 |
| Product | R3H domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:2796724..2798758 + |
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