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CAN33_27005-T1, CAN33_27005-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_27005-T1
Unique NameCAN33_27005-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:3380910..3381590+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_27005-T1 ID=CAN33_27005-T1|Name=CAN33_27005-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=681bp|location=Sequence derived from alignment at NKJJ01000002.1:3380910..3381590+ (Aspergillus niger FDAARGOS_311)
ATGAACCAACTAGCAGCAAAGCTAGGCCTATCTCCGGAGCTCCAATTCTA
CGACGTCTATTCCCTAGATGACCCATCACAGCTTACACACATCCCCCGAC
CTGCTCTGACACTCTTAGTCATTATCCCACTTACACCAGCCTGGGACCAA
AGCCGCAAGGCCGAAGACGCTAACAAAGAAGAACCCTACCCTGGCTCCGG
CCGTCCTGACGAGCCAGTCATCTGGTTCAAGCAGACCATCGGCCATGCTT
GCGGATCGATCGGGCTATTACATAGTGTGATCAACGGTCCGGCTGTCGAC
TTCATCACACCTGGGTCCGATCTTGAGACGATACGGAACCTCGCCATACC
GCTGGATATGAACAAACGCGCTAAAATGCTCTATAACAATGAAGCGTTTG
AAGTTGCTCATAAGTCAGTTGAGCAGACGGGCGAAAGCGATGCCAATCTA
ATGGATGAGCGTGATGGTGGGCATTTCGTTAGTTTCGTCAAGAGCGGCGG
GAAGCTCTGGGAGCTGGAGGGGTCGAGGAAGGGGCCTCTGAAGAGGGGAG
ACCTTGCTGAGAATGAGGATGTTCTTAGTCCGCGGGCGCTTGATATGGGC
ATCAGGAGGATCATCAAGCTGAATGCGGATGAAGGGGGTAGTCTGCTTTT
TAGTTGCATTGCTCTGGCGCGTAAGGCATAG
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Coding sequence (CDS) from alignment at NKJJ01000002.1:3380910..3381590+

>CAN33_27005-T1 ID=CAN33_27005-T1|Name=CAN33_27005-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=681bp|location=Sequence derived from alignment at NKJJ01000002.1:3380910..3381590+ (Aspergillus niger FDAARGOS_311)
ATGAACCAACTAGCAGCAAAGCTAGGCCTATCTCCGGAGCTCCAATTCTA
CGACGTCTATTCCCTAGATGACCCATCACAGCTTACACACATCCCCCGAC
CTGCTCTGACACTCTTAGTCATTATCCCACTTACACCAGCCTGGGACCAA
AGCCGCAAGGCCGAAGACGCTAACAAAGAAGAACCCTACCCTGGCTCCGG
CCGTCCTGACGAGCCAGTCATCTGGTTCAAGCAGACCATCGGCCATGCTT
GCGGATCGATCGGGCTATTACATAGTGTGATCAACGGTCCGGCTGTCGAC
TTCATCACACCTGGGTCCGATCTTGAGACGATACGGAACCTCGCCATACC
GCTGGATATGAACAAACGCGCTAAAATGCTCTATAACAATGAAGCGTTTG
AAGTTGCTCATAAGTCAGTTGAGCAGACGGGCGAAAGCGATGCCAATCTA
ATGGATGAGCGTGATGGTGGGCATTTCGTTAGTTTCGTCAAGAGCGGCGG
GAAGCTCTGGGAGCTGGAGGGGTCGAGGAAGGGGCCTCTGAAGAGGGGAG
ACCTTGCTGAGAATGAGGATGTTCTTAGTCCGCGGGCGCTTGATATGGGC
ATCAGGAGGATCATCAAGCTGAATGCGGATGAAGGGGGTAGTCTGCTTTT
TAGTTGCATTGCTCTGGCGCGTAAGGCATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004843thiol-dependent ubiquitin-specific protease activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_27005CAN33_27005Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_27005-T1.exon1CAN33_27005-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_27005-T1.cdsCAN33_27005-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_27005-T1CAN33_27005-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteMEROPS:MER0000836
DBxrefInterPro:IPR038765
DBxrefInterPro:IPR036959
DBxrefInterPro:IPR001578
DBxrefPFAM:PF01088
ProductUbiquitin carboxyl-terminal hydrolase family 1 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:3380910..3381590 +
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