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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:3538643..3539716- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_27260-T1 ID=CAN33_27260-T1|Name=CAN33_27260-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1074bp|location=Sequence derived from alignment at NKJJ01000002.1:3538643..3539716- (Aspergillus niger FDAARGOS_311)
ATGATGGACGGAACAGTCCTCATCACCGGCGCAAACGGCTCTCTAGCCCT
AGGGTTCATCCAAGCTTTACTAACCCTTCATCCCCAGATAAACCTTGTCG
CCACCGTCCGAAACGCCTCCCCAGAGCATGACCCAAACACCGCAAAGCTC
CTCAACCTAGTTGCCAAATACCCCAAAGCGAACTTCCACCTCGAGACCCT
CGATCTTGGGAACCTCGCCAGCGTACGCTCCTTCGCAGATCAAGTAGCTA
ACCAAGTCCTCTCAAAGAAACTTCCTCCCCTCTCAGCAATAATCTGCAAT
GCTGCCACCTTCTCTTTCGAAGCAGGACAGGTCTATACGACGGACGGTTA
CGAAAGCACTTTCCAAGTATGCCATCTGTCTCATTACCTCTTGATTCTGA
GACTTCTCGGAAGCATGAACAAGACATCCGGACGCATCGTCCTCCTTGGT
TCTGTCACCCATTACCCCGAAAAGCCGAACCCGCTTTCTTCTCTCAGACC
GGGGTTTCCTGAGAATATGGACGACTTGGTGCATCCCCCGCCGGATCCGC
CGACTCTTGTGCATGATAAAGGGTTTCAGAGATACGGTACGGCAAAGCTG
GCGAATGTTATGTTGGCGATGGATCTCAATCGCAGATTGCAGGAGGTATG
TACTTCTGTTGTCCGGTCGATGTGCACGTTGATTAACTTTCGCTTTCTAT
AGGATGACCGGCTATCGGGTATCACTGCCCTCGCTATGGACCCAGGTGGT
CTCCCGAGCTCCAGGGCGCAAGAGGGGCAGAAAAGATCGGCTCGATGGTT
GTTTAAGGTTGTTGAATTTCTGATGCCCGTTTTGAGGTACATGATTACGA
TGTTTCGTACTATTGAGGACGCTGGACACGATTTGGTTGTTGTGAGTGTT
GGGGCTGAGTTCCGAGGGAAGAGAGGGTATTTCGTTGGGGTGAAGAAGGT
GGCGCCTGCGGCGCTCAGCGAAGATCGTGAAGCACAGGAGAAATTGTGGG
GGAATTGTTGGAGGTGGGCGGGTTTGCGAACTGAGGAGACTGCGCTTCGT
AATTCTGCTCCTAATGCTGATTAG back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:3538643..3539716- >CAN33_27260-T1 ID=CAN33_27260-T1|Name=CAN33_27260-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2034bp|location=Sequence derived from alignment at NKJJ01000002.1:3538643..3539716- (Aspergillus niger FDAARGOS_311)
GATGACCGGCTATCGGGTATCACTGCCCTCGCTATGGACCCAGGTGGTCT
CCCGAGCTCCAGGGCGCAAGAGGGGCAGAAAAGATCGGCTCGATGGTTGT
TTAAGGTTGTTGAATTTCTGATGCCCGTTTTGAGGTACATGATTACGATG
TTTCGTACTATTGAGGACGCTGGACACGATTTGGTTGTTGTGAGTGTTGG
GGCTGAGTTCCGAGGGAAGAGAGGGTATTTCGTTGGGGTGAAGAAGGTGG
CGCCTGCGGCGCTCAGCGAAGATCGTGAAGCACAGGAGAAATTGTGGGGG
AATTGTTGGAGGTGGGCGGGTTTGCGAACTGAGGAGACTGCGCTTCGTAA
TTCTGCTCCTAATGCTGATTAGATGATGGACGGAACAGTCCTCATCACCG
GCGCAAACGGCTCTCTAGCCCTAGGGTTCATCCAAGCTTTACTAACCCTT
CATCCCCAGATAAACCTTGTCGCCACCGTCCGAAACGCCTCCCCAGAGCA
TGACCCAAACACCGCAAAGCTCCTCAACCTAGTTGCCAAATACCCCAAAG
CGAACTTCCACCTCGAGACCCTCGATCTTGGGAACCTCGCCAGCGTACGC
TCCTTCGCAGATCAAGTAGCTAACCAAGTCCTCTCAAAGAAACTTCCTCC
CCTCTCAGCAATAATCTGCAATGCTGCCACCTTCTCTTTCGAAGCAGGAC
AGGTCTATACGACGGACGGTTACGAAAGCACTTTCCAAGTATGCCATCTG
TCTCATTACCTCTTGATTCTGAGACTTCTCGGAAGCATGAACAAGACATC
CGGACGCATCGTCCTCCTTGGTTCTGTCACCCATTACCCCGAAAAGCCGA
ACCCGCTTTCTTCTCTCAGACCGGGGTTTCCTGAGAATATGGACGACTTG
GTGCATCCCCCGCCGGATCCGCCGACTCTTGTGCATGATAAAGGGTTTCA
GAGATACGGTACGGCAAAGCTGGCGAATGTTATGTTGGCGATGGATCTCA
ATCGCAGATTGCAGGAGGATGACCGGCTATCGGGTATCACTGCCCTCGCT
ATGGACCCAGGTGGTCTCCCGAGCTCCAGGGCGCAAGAGGGGCAGAAAAG
ATCGGCTCGATGGTTGTTTAAGGTTGTTGAATTTCTGATGCCCGTTTTGA
GGTACATGATTACGATGTTTCGTACTATTGAGGACGCTGGACACGATTTG
GTTGTTGTGAGTGTTGGGGCTGAGTTCCGAGGGAAGAGAGGGTATTTCGT
TGGGGTGAAGAAGGTGGCGCCTGCGGCGCTCAGCGAAGATCGTGAAGCAC
AGGAGAAATTGTGGGGGAATTGTTGGAGGTGGGCGGGTTTGCGAACTGAG
GAGACTGCGCTTCGTAATTCTGCTCCTAATGCTGATTAGATGATGGACGG
AACAGTCCTCATCACCGGCGCAAACGGCTCTCTAGCCCTAGGGTTCATCC
AAGCTTTACTAACCCTTCATCCCCAGATAAACCTTGTCGCCACCGTCCGA
AACGCCTCCCCAGAGCATGACCCAAACACCGCAAAGCTCCTCAACCTAGT
TGCCAAATACCCCAAAGCGAACTTCCACCTCGAGACCCTCGATCTTGGGA
ACCTCGCCAGCGTACGCTCCTTCGCAGATCAAGTAGCTAACCAAGTCCTC
TCAAAGAAACTTCCTCCCCTCTCAGCAATAATCTGCAATGCTGCCACCTT
CTCTTTCGAAGCAGGACAGGTCTATACGACGGACGGTTACGAAAGCACTT
TCCAAGTATGCCATCTGTCTCATTACCTCTTGATTCTGAGACTTCTCGGA
AGCATGAACAAGACATCCGGACGCATCGTCCTCCTTGGTTCTGTCACCCA
TTACCCCGAAAAGCCGAACCCGCTTTCTTCTCTCAGACCGGGGTTTCCTG
AGAATATGGACGACTTGGTGCATCCCCCGCCGGATCCGCCGACTCTTGTG
CATGATAAAGGGTTTCAGAGATACGGTACGGCAAAGCTGGCGAATGTTAT
GTTGGCGATGGATCTCAATCGCAGATTGCAGGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR013968 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| Product | short chain dehydrogenase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:3538643..3539716 - |
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