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CAN33_27445-T1, CAN33_27445-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_27445-T1
Unique NameCAN33_27445-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:3664078..3665204+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_27445-T1 ID=CAN33_27445-T1|Name=CAN33_27445-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1127bp|location=Sequence derived from alignment at NKJJ01000002.1:3664078..3665204+ (Aspergillus niger FDAARGOS_311)
ATGTCGCCCAACACCGCAGACGACGCTCTTTCATATAATTTTCAGAAGGC
ATGCATTGATGGTAACCTTCGGGCAGTCCAGAGGGCTCTCGCCAGCGGAA
GACTCTCTGCTAAGGATCTTGACACTGGACTAAGGATCAGTACTAAAGAG
GCACATCCGGACATAGTAGCAGCTCTCTTTGAGGCAGGTGTGCCTATGTC
GCCAAATGCAATAGGCTGCCTCTGTGGGAATGATGCGAAACAGGACCCGC
GCGTCATTCGCCTCTACTTCGATCGTGGTCTGAAGCCTAGTGATTGTATT
ACGACTAAAGGCGAGCCTCTTTTACGGTACTTCAATTCCCAATAATTATT
GGCCTTCATAGAGAAACTAACTGTACTGGGTAATGTAGATTTTATTCGGT
TGACTGTGCCCGGGAATTACTCGAGCGAGGCGTCGACCCCAACCGCTGCG
GTCCGAGAAAGATAAGCCCCCTCTCCAGCTCTCTTGACCTGGTTCACGAG
GACAACGGGTCTACATTCGAATTACTTGTGAAATATGGGGCGAAGATGGA
TCCCGGTCTCTTGTTTGATGCTCTTGTTTGGAGCAGCGATGCAGCTATCA
AATTTCGTTTCCTTCTCTCCAAGGGTCTTGATCCGACCACGACAATTTCT
GCAGAATGGGGCACGCCGCTACATGTTGCAGCTCTCTTCGCCGATAAGGA
GATTATTAGAATGCTTCTCGACTTGGGAGCAGATCCGAACTCCCGATCAT
ACTGTATGAAGTTCAAAAATAAAACCCCCGTGGAAGTCGCCGAGTGGAAG
ATGCGAGCTTCTCATGAAGGCTCTTCTATGAAGGGTATGTATCAAAGTGT
CATAGAGCTTCTCGGATCTACACAGATCGGAGTCTCTCTTCCTACAGTTG
CTGCGTCGGAGAGGTCAAATACCGAGAGCGATACGGAGCCCCCTGCCGCG
AATAGAACGGAAATCAACGAACGACTCAATGCTGTCGACACTGGATTGTC
AGGTTCTTTAACGGGTGACTCGAATTGGACTGGCTCCCAAAAGACCCAGA
ATACCCGGAAGACACGAATTCCAGGGGAAGGCAGCGTTAGTAGCCGGACA
CGCAGTCGTACCAAGACTGTCCCTTAG
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Coding sequence (CDS) from alignment at NKJJ01000002.1:3664078..3665204+

>CAN33_27445-T1 ID=CAN33_27445-T1|Name=CAN33_27445-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2130bp|location=Sequence derived from alignment at NKJJ01000002.1:3664078..3665204+ (Aspergillus niger FDAARGOS_311)
ATGTCGCCCAACACCGCAGACGACGCTCTTTCATATAATTTTCAGAAGGC
ATGCATTGATGGTAACCTTCGGGCAGTCCAGAGGGCTCTCGCCAGCGGAA
GACTCTCTGCTAAGGATCTTGACACTGGACTAAGGATCAGTACTAAAGAG
GCACATCCGGACATAGTAGCAGCTCTCTTTGAGGCAGGTGTGCCTATGTC
GCCAAATGCAATAGGCTGCCTCTGTGGGAATGATGCGAAACAGGACCCGC
GCGTCATTCGCCTCTACTTCGATCGTGGTCTGAAGCCTAGTGATTGTATT
ACGACTAAAGGCGAGCCTCTTTTACGATTTTATTCGGTTGACTGTGCCCG
GGAATTACTCGAGCGAGGCGTCGACCCCAACCGCTGCGGTCCGAGAAAGA
TAAGCCCCCTCTCCAGCTCTCTTGACCTGGTTCACGAGGACAACGGGTCT
ACATTCGAATTACTTGTGAAATATGGGGCGAAGATGGATCCCGGTCTCTT
GTTTGATGCTCTTGTTTGGAGCAGCGATGCAGCTATCAAATTTCGTTTCC
TTCTCTCCAAGGGTCTTGATCCGACCACGACAATTTCTGCAGAATGGGGC
ACGCCGCTACATGTTGCAGCTCTCTTCGCCGATAAGGAGATTATTAGAAT
GCTTCTCGACTTGGGAGCAGATCCGAACTCCCGATCATACTGTATGAAGT
TCAAAAATAAAACCCCCGTGGAAGTCGCCGAGTGGAAGATGCGAGCTTCT
CATGAAGGCTCTTCTATGAAGGGTATGTATCAAAGTGTCATAGAGCTTCT
CGGATCTACACAGATCGGAGTCTCTCTTCCTACAGTTGCTGCGTCGGAGA
GGTCAAATACCGAGAGCGATACGGAGCCCCCTGCCGCGAATAGAACGGAA
ATCAACGAACGACTCAATGCTGTCGACACTGGATTGTCAGGTTCTTTAAC
GGGTGACTCGAATTGGACTGGCTCCCAAAAGACCCAGAATACCCGGAAGA
CACGAATTCCAGGGGAAGGCAGCGTTAGTAGCCGGACACGCAGTCGTACC
AAGACTGTCCCTTAGATGTCGCCCAACACCGCAGACGACGCTCTTTCATA
TAATTTTCAGAAGGCATGCATTGATGGTAACCTTCGGGCAGTCCAGAGGG
CTCTCGCCAGCGGAAGACTCTCTGCTAAGGATCTTGACACTGGACTAAGG
ATCAGTACTAAAGAGGCACATCCGGACATAGTAGCAGCTCTCTTTGAGGC
AGGTGTGCCTATGTCGCCAAATGCAATAGGCTGCCTCTGTGGGAATGATG
CGAAACAGGACCCGCGCGTCATTCGCCTCTACTTCGATCGTGGTCTGAAG
CCTAGTGATTGTATTACGACTAAAGGCGAGCCTCTTTTACGATTTTATTC
GGTTGACTGTGCCCGGGAATTACTCGAGCGAGGCGTCGACCCCAACCGCT
GCGGTCCGAGAAAGATAAGCCCCCTCTCCAGCTCTCTTGACCTGGTTCAC
GAGGACAACGGGTCTACATTCGAATTACTTGTGAAATATGGGGCGAAGAT
GGATCCCGGTCTCTTGTTTGATGCTCTTGTTTGGAGCAGCGATGCAGCTA
TCAAATTTCGTTTCCTTCTCTCCAAGGGTCTTGATCCGACCACGACAATT
TCTGCAGAATGGGGCACGCCGCTACATGTTGCAGCTCTCTTCGCCGATAA
GGAGATTATTAGAATGCTTCTCGACTTGGGAGCAGATCCGAACTCCCGAT
CATACTGTATGAAGTTCAAAAATAAAACCCCCGTGGAAGTCGCCGAGTGG
AAGATGCGAGCTTCTCATGAAGGCTCTTCTATGAAGGGTATGTATCAAAG
TGTCATAGAGCTTCTCGGATCTACACAGATCGGAGTCTCTCTTCCTACAG
TTGCTGCGTCGGAGAGGTCAAATACCGAGAGCGATACGGAGCCCCCTGCC
GCGAATAGAACGGAAATCAACGAACGACTCAATGCTGTCGACACTGGATT
GTCAGGTTCTTTAACGGGTGACTCGAATTGGACTGGCTCCCAAAAGACCC
AGAATACCCGGAAGACACGAATTCCAGGGGAAGGCAGCGTTAGTAGCCGG
ACACGCAGTCGTACCAAGACTGTCCCTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_27445CAN33_27445Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_27445-T1.exon1CAN33_27445-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_27445-T1.exon2CAN33_27445-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_27445-T1.cdsCAN33_27445-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_27445-T1CAN33_27445-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13606
DBxrefPFAM:PF00023
ProductAnkyrin repeats (3 copies) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:3664078..3665204 +
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