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CAN33_27560-T1, CAN33_27560-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_27560-T1
Unique NameCAN33_27560-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:3727402..3727900-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_27560-T1 ID=CAN33_27560-T1|Name=CAN33_27560-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=499bp|location=Sequence derived from alignment at NKJJ01000002.1:3727402..3727900- (Aspergillus niger FDAARGOS_311)
ATGGCCTCTTTCAAGTATCACGCACTTCCTGGCTTTGGAGAAGAGTGTCG
CGAGAAATACGGGTTCAGCGATGCCTGCATCATCGGCAATCGGCTGGTCG
TCACTGGGCAGAGTAAGCAGTGTACCGGAACCACGTCTGAGGACCCAGGG
CTAATCAGATTGCAAAGCGGGCATGAATCCTTTGACCAGAGAAACTTCTC
CCAAAATTGAGGAGCAAATTGCGCAGGCCTTCAACAACATCAATGACCTG
ATCATCCACACTCTCGTTCAAGAAGGTCATGCCATTGAGGAGAATAGTAC
TGGCTGGGATTACGTGGTCAAGCTGCGCGCGTTCTTCGTGGGATTATCCG
GAATGCGCGTGGAAGCACGGGAGAATATGGTCCACTACATCAAGAAGTGG
TGTCCTCGCCATCAGCCGTTGTTCACCATGGTAGGAATCGAAAGCCTGCC
TTTTCCCGAGCACCTTGTGGAGTTTGAAGTTGGTGTATGGATTCCTTAA
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Coding sequence (CDS) from alignment at NKJJ01000002.1:3727402..3727900-

>CAN33_27560-T1 ID=CAN33_27560-T1|Name=CAN33_27560-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=888bp|location=Sequence derived from alignment at NKJJ01000002.1:3727402..3727900- (Aspergillus niger FDAARGOS_311)
CGGGCATGAATCCTTTGACCAGAGAAACTTCTCCCAAAATTGAGGAGCAA
ATTGCGCAGGCCTTCAACAACATCAATGACCTGATCATCCACACTCTCGT
TCAAGAAGGTCATGCCATTGAGGAGAATAGTACTGGCTGGGATTACGTGG
TCAAGCTGCGCGCGTTCTTCGTGGGATTATCCGGAATGCGCGTGGAAGCA
CGGGAGAATATGGTCCACTACATCAAGAAGTGGTGTCCTCGCCATCAGCC
GTTGTTCACCATGGTAGGAATCGAAAGCCTGCCTTTTCCCGAGCACCTTG
TGGAGTTTGAAGTTGGTGTATGGATTCCTTAAATGGCCTCTTTCAAGTAT
CACGCACTTCCTGGCTTTGGAGAAGAGTGTCGCGAGAAATACGGGTTCAG
CGATGCCTGCATCATCGGCAATCGGCTGGTCGTCACTGGGCAGACGGGCA
TGAATCCTTTGACCAGAGAAACTTCTCCCAAAATTGAGGAGCAAATTGCG
CAGGCCTTCAACAACATCAATGACCTGATCATCCACACTCTCGTTCAAGA
AGGTCATGCCATTGAGGAGAATAGTACTGGCTGGGATTACGTGGTCAAGC
TGCGCGCGTTCTTCGTGGGATTATCCGGAATGCGCGTGGAAGCACGGGAG
AATATGGTCCACTACATCAAGAAGTGGTGTCCTCGCCATCAGCCGTTGTT
CACCATGGTAGGAATCGAAAGCCTGCCTTTTCCCGAGCACCTTGTGGAGT
TTGAAGTTGGTGTATGGATTCCTTAAATGGCCTCTTTCAAGTATCACGCA
CTTCCTGGCTTTGGAGAAGAGTGTCGCGAGAAATACGGGTTCAGCGATGC
CTGCATCATCGGCAATCGGCTGGTCGTCACTGGGCAGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_27560CAN33_27560Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_27560-T1CAN33_27560-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_27560-T1.cdsCAN33_27560-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_27560-T1.exon2CAN33_27560-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_27560-T1.exon1CAN33_27560-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR035959
DBxrefInterPro:IPR006175
DBxrefPFAM:PF01042
ProductEndoribonuclease L-PSP family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:3727402..3727900 -
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