You are here

Home

CAN33_2760-T1, CAN33_2760-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_2760-T1
Unique NameCAN33_2760-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:1710380..1713200+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_2760-T1 ID=CAN33_2760-T1|Name=CAN33_2760-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2821bp|location=Sequence derived from alignment at NKJJ01000004.1:1710380..1713200+ (Aspergillus niger FDAARGOS_311)
ATGCGGCGCCATGGCAGAGCTAGTGGTGGCTCAACAAAAGCCGTTCACCC
CATTTCCGACACCGCATCGCTCTTACATTCGTTCGATTCCATCACCAATC
CCAATCGTCCCGTACGACCCTCGCCCTTGACCTCTTCTAATATTCAAGCT
CTCCCGTTGGACCTCGTTGACCGATTGCGCTCCTTTCCCTTGTTTCAATC
CACGCCCGAATCCTTCCTGGTCGATGTCGGCCAGCATCTGCGCCCACAGC
TCCATGCGCCCAACGACTATATCCTGACGGAGGGGGACGAGGCCAAGGCC
ATCTACTGGCTGGTTCGGGGCGCTGTCTCCGTGACCTCGCGCGATGGCGA
GAGTATATATGCGGAGCTTGAACCGGGGGCCTTTTTTGGCGAAATCGGTG
TACTAATGGATCGTCCGCGGACAGCAACCATCATCGCCCGCACTCGATGC
TTACTGGTCGTGTTAACCAAGGAGGATTTCCGGAAAATTCTCCCTCGGTT
CCCCGACGTGGAACGGGCAATTCGCGACGAGGCCCAGGAGAGACTGATGA
TCCTGGAGAAGAAGAAGAAGGAGACCTCTGTACCATCGGTTGATTTTGTG
AGTCCGGTCAGGAGAGGCTCGAAGAGATTGCGGGACACATACTCCGGTGA
CCTGAACCTCACGGATCAGGACGGCAGAAGCTTGAAGTCCGTCAATAAAA
AGCGAAAGTCCCCGAGTCCTGGATTGGCTGATGGATCCTCCAGTGCGCTG
GCGAACGGGCTGGTTAATGTCCGTTTACTTCTCAAGGAGCTGCCCCTCTT
CTCCGGTTTGCCGCCAGATATCCTCCATTTCCTGGGCCTGAATGCGCAAC
CGCGCTCCTACCCGCCATTCACCGATATTATCAAGCAGGACTCCCAGGGT
CGGGAGATTTATTTCATTGTCCGCGGGGAGGTTGAGGTTTTGTCGGAGAG
AGCAGCAAACAATCATGCGCAATCGTTGCCAAATAAGATCGAGCACCCTA
GTTTCGAAGTTAAAGCCCGGCTGAAACAGGGACAATACTTTGGTGAAGTT
GTGAGCCTCTCCCTGGCACCACGCCGGACCGCCACCGTGCGATCCATAAG
TGCGGTGGAATGTCTGATGATCAGCGGTGATGTACTAGTAGAATTCTGGG
AGAGATGTCCTCCAAAAGTTCGCGAACAGGTGGAAAGGACCGCCAAGGAG
CGGCTTCAAGCAGCGTCTGATGGCGACGTTGTGATGTCAGAAGCGGGAAG
CGACGAGCAACCTGCCGGCGAGCTGAGTGTCGATGATAACTTCAAGATGA
GGGCGGGCCGCAGACAATCCATGCCTCTTCTAACCTTAACAGAGACTGAG
TTAGACAGCACTCCGACTGCCAAAGGTCTAGATGAACCAAGTGTGCTGCG
GCCTTCCGATCCGGATCCTTTCCTCAGTGTGGGCCTAGACAAAGTCCGGC
TGCGAAGCCGGCGCAGCTCCGTGGCGCCATTGACGCCGGAGGAGGTTTCC
GGGGAGCAACAGAGATCTTCACCCTCATCTGAGCCTAGATCTACTAGCTC
GTCCTTTCTCACGCTTCCCGGGGCCGGTGAGTTCTCAACACCGTCAGAGA
CGGTCCGTGAGCCACGTCGTGACAACCACGGGTATCTTCCCGATCGGGTC
CTGTTGGTTATATTTCAGCATCTGGAGCTTCATGATCTACTTCGCCTCAG
GGCGGTCTCTATGCACTGGTCAGAGATTCTCAGCAAGTCAACGGAGCTGC
TTCGTTACCTGGACCTGAGTACCTATAACCGGTGCGTCACGGATGACGTA
TTGGTGAAGATCATTTGCCCATTCGTAGGTAGTCGGCCGCGATATATCGA
CATTAGCAATTGCTTCCATATAACGGACGAAGGGTTCAGCAAGTTGGTTG
CGACGTGCGGATCTAACGTTGTCACCTGGAAAATGAAGAGCGTTTGGGAT
GTCACCGCATCGGCTATTCTTGACATGGCGAGCAAGGCGAACAGCCTACA
GGAGGTTGATCTGAGCAATTGTCGAAAAGTCGGGGATACGCTCCTAGCTC
GAATTGTAGGCTGGGTATCTCCTGGCCAGCATAAGCCACACGACGAGTCG
AAACCCGGGAAGGCGTCTATGAAGCCTACCAAACAGACGGCCGCCGGGAC
CGTATACGGCTGCCCCGAACTCAAGAAATTAACCTTATCCTATTGCAAGC
ATGTTACGGACCGGTCGATGCACCACATCGCATCGCACGCTGCTTCCAGG
ATCGAGCAGATGGACCTTACCCGTTGCACTACCATTACCGACCAAGGCTT
CCAATTCTGGGGTAATGCTCGGTTCACCAATCTCCGCAGACTCTGCTTGG
CGGACTGCACGTATTTGACTGACAACGCTATCGTGCATCTTACGAATGCA
GCAAAGCAGCTGCGGGAGCTAGATTTGGTAAGCTAGATCTACAATGTCTA
AGTGACGACGGACTAACAATTGGCAGTCGTTCTGTTGTGCTCTGTCCGAC
ACGGCTACAGAAGTACTTGCTCTGCAATGTTCGCAACTGACCTACCTCAA
TATGTCTTTCTGTGGCTCCGCCATATCAGACCCATCTCTGCGCTGCATCG
GCCTGCACCTGTTACATCTTAAACGTCTTTCCGTCCGAGGCTGTGTTCGG
GTAACCGGTGCCGGTGTTGAGGCGGTTGCAGACGGCTGCAACCAACTGAC
ATCCTTTGATGTCAGTCAGTGCAAGAACCTCCTCCCATGGATTGAAGGCG
ACGGACCCCGCAAATACGGGAAGAAGATATCATTTGAGACTGTTGCGCAA
AACGGAAGGGTCTTTCGCTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000004.1:1710380..1713200+

>CAN33_2760-T1 ID=CAN33_2760-T1|Name=CAN33_2760-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5544bp|location=Sequence derived from alignment at NKJJ01000004.1:1710380..1713200+ (Aspergillus niger FDAARGOS_311)
ATGCGGCGCCATGGCAGAGCTAGTGGTGGCTCAACAAAAGCCGTTCACCC
CATTTCCGACACCGCATCGCTCTTACATTCGTTCGATTCCATCACCAATC
CCAATCGTCCCGTACGACCCTCGCCCTTGACCTCTTCTAATATTCAAGCT
CTCCCGTTGGACCTCGTTGACCGATTGCGCTCCTTTCCCTTGTTTCAATC
CACGCCCGAATCCTTCCTGGTCGATGTCGGCCAGCATCTGCGCCCACAGC
TCCATGCGCCCAACGACTATATCCTGACGGAGGGGGACGAGGCCAAGGCC
ATCTACTGGCTGGTTCGGGGCGCTGTCTCCGTGACCTCGCGCGATGGCGA
GAGTATATATGCGGAGCTTGAACCGGGGGCCTTTTTTGGCGAAATCGGTG
TACTAATGGATCGTCCGCGGACAGCAACCATCATCGCCCGCACTCGATGC
TTACTGGTCGTGTTAACCAAGGAGGATTTCCGGAAAATTCTCCCTCGGTT
CCCCGACGTGGAACGGGCAATTCGCGACGAGGCCCAGGAGAGACTGATGA
TCCTGGAGAAGAAGAAGAAGGAGACCTCTGTACCATCGGTTGATTTTGTG
AGTCCGGTCAGGAGAGGCTCGAAGAGATTGCGGGACACATACTCCGGTGA
CCTGAACCTCACGGATCAGGACGGCAGAAGCTTGAAGTCCGTCAATAAAA
AGCGAAAGTCCCCGAGTCCTGGATTGGCTGATGGATCCTCCAGTGCGCTG
GCGAACGGGCTGGTTAATGTCCGTTTACTTCTCAAGGAGCTGCCCCTCTT
CTCCGGTTTGCCGCCAGATATCCTCCATTTCCTGGGCCTGAATGCGCAAC
CGCGCTCCTACCCGCCATTCACCGATATTATCAAGCAGGACTCCCAGGGT
CGGGAGATTTATTTCATTGTCCGCGGGGAGGTTGAGGTTTTGTCGGAGAG
AGCAGCAAACAATCATGCGCAATCGTTGCCAAATAAGATCGAGCACCCTA
GTTTCGAAGTTAAAGCCCGGCTGAAACAGGGACAATACTTTGGTGAAGTT
GTGAGCCTCTCCCTGGCACCACGCCGGACCGCCACCGTGCGATCCATAAG
TGCGGTGGAATGTCTGATGATCAGCGGTGATGTACTAGTAGAATTCTGGG
AGAGATGTCCTCCAAAAGTTCGCGAACAGGTGGAAAGGACCGCCAAGGAG
CGGCTTCAAGCAGCGTCTGATGGCGACGTTGTGATGTCAGAAGCGGGAAG
CGACGAGCAACCTGCCGGCGAGCTGAGTGTCGATGATAACTTCAAGATGA
GGGCGGGCCGCAGACAATCCATGCCTCTTCTAACCTTAACAGAGACTGAG
TTAGACAGCACTCCGACTGCCAAAGGTCTAGATGAACCAAGTGTGCTGCG
GCCTTCCGATCCGGATCCTTTCCTCAGTGTGGGCCTAGACAAAGTCCGGC
TGCGAAGCCGGCGCAGCTCCGTGGCGCCATTGACGCCGGAGGAGGTTTCC
GGGGAGCAACAGAGATCTTCACCCTCATCTGAGCCTAGATCTACTAGCTC
GTCCTTTCTCACGCTTCCCGGGGCCGGTGAGTTCTCAACACCGTCAGAGA
CGGTCCGTGAGCCACGTCGTGACAACCACGGGTATCTTCCCGATCGGGTC
CTGTTGGTTATATTTCAGCATCTGGAGCTTCATGATCTACTTCGCCTCAG
GGCGGTCTCTATGCACTGGTCAGAGATTCTCAGCAAGTCAACGGAGCTGC
TTCGTTACCTGGACCTGAGTACCTATAACCGGTGCGTCACGGATGACGTA
TTGGTGAAGATCATTTGCCCATTCGTAGGTAGTCGGCCGCGATATATCGA
CATTAGCAATTGCTTCCATATAACGGACGAAGGGTTCAGCAAGTTGGTTG
CGACGTGCGGATCTAACGTTGTCACCTGGAAAATGAAGAGCGTTTGGGAT
GTCACCGCATCGGCTATTCTTGACATGGCGAGCAAGGCGAACAGCCTACA
GGAGGTTGATCTGAGCAATTGTCGAAAAGTCGGGGATACGCTCCTAGCTC
GAATTGTAGGCTGGGTATCTCCTGGCCAGCATAAGCCACACGACGAGTCG
AAACCCGGGAAGGCGTCTATGAAGCCTACCAAACAGACGGCCGCCGGGAC
CGTATACGGCTGCCCCGAACTCAAGAAATTAACCTTATCCTATTGCAAGC
ATGTTACGGACCGGTCGATGCACCACATCGCATCGCACGCTGCTTCCAGG
ATCGAGCAGATGGACCTTACCCGTTGCACTACCATTACCGACCAAGGCTT
CCAATTCTGGGGTAATGCTCGGTTCACCAATCTCCGCAGACTCTGCTTGG
CGGACTGCACGTATTTGACTGACAACGCTATCGTGCATCTTACGAATGCA
GCAAAGCAGCTGCGGGAGCTAGATTTGTCGTTCTGTTGTGCTCTGTCCGA
CACGGCTACAGAAGTACTTGCTCTGCAATGTTCGCAACTGACCTACCTCA
ATATGTCTTTCTGTGGCTCCGCCATATCAGACCCATCTCTGCGCTGCATC
GGCCTGCACCTGTTACATCTTAAACGTCTTTCCGTCCGAGGCTGTGTTCG
GGTAACCGGTGCCGGTGTTGAGGCGGTTGCAGACGGCTGCAACCAACTGA
CATCCTTTGATGTCAGTCAGTGCAAGAACCTCCTCCCATGGATTGAAGGC
GACGGACCCCGCAAATACGGGAAGAAGATATCATTTGAGACTGTTGCGCA
AAACGGAAGGGTCTTTCGCTGAATGCGGCGCCATGGCAGAGCTAGTGGTG
GCTCAACAAAAGCCGTTCACCCCATTTCCGACACCGCATCGCTCTTACAT
TCGTTCGATTCCATCACCAATCCCAATCGTCCCGTACGACCCTCGCCCTT
GACCTCTTCTAATATTCAAGCTCTCCCGTTGGACCTCGTTGACCGATTGC
GCTCCTTTCCCTTGTTTCAATCCACGCCCGAATCCTTCCTGGTCGATGTC
GGCCAGCATCTGCGCCCACAGCTCCATGCGCCCAACGACTATATCCTGAC
GGAGGGGGACGAGGCCAAGGCCATCTACTGGCTGGTTCGGGGCGCTGTCT
CCGTGACCTCGCGCGATGGCGAGAGTATATATGCGGAGCTTGAACCGGGG
GCCTTTTTTGGCGAAATCGGTGTACTAATGGATCGTCCGCGGACAGCAAC
CATCATCGCCCGCACTCGATGCTTACTGGTCGTGTTAACCAAGGAGGATT
TCCGGAAAATTCTCCCTCGGTTCCCCGACGTGGAACGGGCAATTCGCGAC
GAGGCCCAGGAGAGACTGATGATCCTGGAGAAGAAGAAGAAGGAGACCTC
TGTACCATCGGTTGATTTTGTGAGTCCGGTCAGGAGAGGCTCGAAGAGAT
TGCGGGACACATACTCCGGTGACCTGAACCTCACGGATCAGGACGGCAGA
AGCTTGAAGTCCGTCAATAAAAAGCGAAAGTCCCCGAGTCCTGGATTGGC
TGATGGATCCTCCAGTGCGCTGGCGAACGGGCTGGTTAATGTCCGTTTAC
TTCTCAAGGAGCTGCCCCTCTTCTCCGGTTTGCCGCCAGATATCCTCCAT
TTCCTGGGCCTGAATGCGCAACCGCGCTCCTACCCGCCATTCACCGATAT
TATCAAGCAGGACTCCCAGGGTCGGGAGATTTATTTCATTGTCCGCGGGG
AGGTTGAGGTTTTGTCGGAGAGAGCAGCAAACAATCATGCGCAATCGTTG
CCAAATAAGATCGAGCACCCTAGTTTCGAAGTTAAAGCCCGGCTGAAACA
GGGACAATACTTTGGTGAAGTTGTGAGCCTCTCCCTGGCACCACGCCGGA
CCGCCACCGTGCGATCCATAAGTGCGGTGGAATGTCTGATGATCAGCGGT
GATGTACTAGTAGAATTCTGGGAGAGATGTCCTCCAAAAGTTCGCGAACA
GGTGGAAAGGACCGCCAAGGAGCGGCTTCAAGCAGCGTCTGATGGCGACG
TTGTGATGTCAGAAGCGGGAAGCGACGAGCAACCTGCCGGCGAGCTGAGT
GTCGATGATAACTTCAAGATGAGGGCGGGCCGCAGACAATCCATGCCTCT
TCTAACCTTAACAGAGACTGAGTTAGACAGCACTCCGACTGCCAAAGGTC
TAGATGAACCAAGTGTGCTGCGGCCTTCCGATCCGGATCCTTTCCTCAGT
GTGGGCCTAGACAAAGTCCGGCTGCGAAGCCGGCGCAGCTCCGTGGCGCC
ATTGACGCCGGAGGAGGTTTCCGGGGAGCAACAGAGATCTTCACCCTCAT
CTGAGCCTAGATCTACTAGCTCGTCCTTTCTCACGCTTCCCGGGGCCGGT
GAGTTCTCAACACCGTCAGAGACGGTCCGTGAGCCACGTCGTGACAACCA
CGGGTATCTTCCCGATCGGGTCCTGTTGGTTATATTTCAGCATCTGGAGC
TTCATGATCTACTTCGCCTCAGGGCGGTCTCTATGCACTGGTCAGAGATT
CTCAGCAAGTCAACGGAGCTGCTTCGTTACCTGGACCTGAGTACCTATAA
CCGGTGCGTCACGGATGACGTATTGGTGAAGATCATTTGCCCATTCGTAG
GTAGTCGGCCGCGATATATCGACATTAGCAATTGCTTCCATATAACGGAC
GAAGGGTTCAGCAAGTTGGTTGCGACGTGCGGATCTAACGTTGTCACCTG
GAAAATGAAGAGCGTTTGGGATGTCACCGCATCGGCTATTCTTGACATGG
CGAGCAAGGCGAACAGCCTACAGGAGGTTGATCTGAGCAATTGTCGAAAA
GTCGGGGATACGCTCCTAGCTCGAATTGTAGGCTGGGTATCTCCTGGCCA
GCATAAGCCACACGACGAGTCGAAACCCGGGAAGGCGTCTATGAAGCCTA
CCAAACAGACGGCCGCCGGGACCGTATACGGCTGCCCCGAACTCAAGAAA
TTAACCTTATCCTATTGCAAGCATGTTACGGACCGGTCGATGCACCACAT
CGCATCGCACGCTGCTTCCAGGATCGAGCAGATGGACCTTACCCGTTGCA
CTACCATTACCGACCAAGGCTTCCAATTCTGGGGTAATGCTCGGTTCACC
AATCTCCGCAGACTCTGCTTGGCGGACTGCACGTATTTGACTGACAACGC
TATCGTGCATCTTACGAATGCAGCAAAGCAGCTGCGGGAGCTAGATTTGT
CGTTCTGTTGTGCTCTGTCCGACACGGCTACAGAAGTACTTGCTCTGCAA
TGTTCGCAACTGACCTACCTCAATATGTCTTTCTGTGGCTCCGCCATATC
AGACCCATCTCTGCGCTGCATCGGCCTGCACCTGTTACATCTTAAACGTC
TTTCCGTCCGAGGCTGTGTTCGGGTAACCGGTGCCGGTGTTGAGGCGGTT
GCAGACGGCTGCAACCAACTGACATCCTTTGATGTCAGTCAGTGCAAGAA
CCTCCTCCCATGGATTGAAGGCGACGGACCCCGCAAATACGGGAAGAAGA
TATCATTTGAGACTGTTGCGCAAAACGGAAGGGTCTTTCGCTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_2760CAN33_2760Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2760-T1.exon1CAN33_2760-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_2760-T1.exon2CAN33_2760-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2760-T1.cdsCAN33_2760-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2760-T1CAN33_2760-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR018490
DBxrefInterPro:IPR036047
DBxrefInterPro:IPR018488
DBxrefInterPro:IPR001611
DBxrefInterPro:IPR014710
DBxrefInterPro:IPR032675
DBxrefInterPro:IPR000595
DBxrefInterPro:IPR001810
DBxrefInterPro:IPR006553
DBxrefPFAM:PF13516
DBxrefPFAM:PF12937
DBxrefPFAM:PF00646
DBxrefPFAM:PF00027
DBxrefPFAM:PF16643
ProductCyclic nucleotide-binding domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:1710380..1713200 +
Powered by Drupal