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CAN33_27610-T1, CAN33_27610-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_27610-T1
Unique NameCAN33_27610-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:3753970..3755453+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_27610-T1 ID=CAN33_27610-T1|Name=CAN33_27610-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1484bp|location=Sequence derived from alignment at NKJJ01000002.1:3753970..3755453+ (Aspergillus niger FDAARGOS_311)
ATGGTCGCGACGGACTCCGGTAGTAATCCCCAGTCGCGAGGTATGCCCAG
TTTTCGTCGCACACCCGCAGGTCATGGCTAACGTCTTCTCGCGTCCCAGG
ATGCTTTCAATGCTCAAAACGCCGGATTGTCTGCGACAGAGGGGAACCTA
CCTGCTTCAAGTGTCAGAAGAAAGGGATTGAATGCTCGGGATCCGGTCGC
TTTCGCTTCAGCCCCGGCCTAGCGAGTCGGGGAAAACTCAAAGGCTGCAC
GATTCCGATACCTGATGTCGACCCGAGATCGGTATACAAAGAAGGCTTAG
ATGGCCCTCGTCCGATTCGGTGGAAGGATGACCTGAATAGAGTCAACAAA
AACCAGAAGCCCAGACTTAGCGGGAAGGAGCGGGTAGTCCGGAATGGACT
GGTCACAGAGAGGGGTTCGGCCAGTGGAGGCAGAGCTCTCGCACAATCGA
TATCTATCGCAAACCAGGACGTTATCCTTAGCTCAGGACAAGAATTGTAT
AGGAACATGCCTTCTGAGGACCCCCGGCCATCCTCAATAGTGGAGACGTC
TGTTGGCCAGTGGATCGCACCAGTCGATTACAGAACCCGCGAATCATTCG
ACTACTTCGCGAAATACGTCGCTCCTGTCATGGTTGTTCTTGATATATCC
AATGGCTACCGGGACATTATCCTCCCCATGGCTTTTGAAGACAGCCTTCT
ACAACAGGCCGTTGCTGTTGTGGCCGCGCAACATCTTGGTTCCCGACACC
CCTCATGTCGAGCGGCGACCGAGTCCAGCCGGTCGGCAATAATATCTCGC
TTACGACGTGATTCTCAGCTTGGTTCGCCCGATCTCGTGTTTAATTCATC
CACTTGGGCAACTCTGATCGTGCTACTTGTTGGGGAAACCGTCACCGGAA
GCTCCGAGTATAGCCACCTGTTACGGACTCTCCTCACCCTGGCCCAAAAC
ATGAGAAGCGTCGGAAATACCGAGCTGAGAGATTTTCTCACAAAGCAGAC
GGACATGTTTGCGTTCCTTGGACAGCCACTTTTAAACGAAGACCTGGGCG
CGGAGAGACTTAGAAATCCGGTTGATCCAAGTGTCTGGATGGCTTCGAGA
GTTAACGCTGATTCGCACCATCACAGAACATTGTCACTTGTCAGGAAAGT
CTTCTCGAAGGGTGCACAGATATATCTTCAGCGTGCGACTACAAACCAAA
GCTCGTGGCAAGTTTTGGAAGAGCTGCGCCAGCTTCTTTGTCAGATGAGC
CCCACGGAGCCAGGTGCCCATGGATTCGTATGGTCATGCTTCATTGCAGC
AGCGGATAGCGTGGATCCCGAGCACAGGGCTTTCTTCAGCGAATACTTGA
AAGGGGTATATTCACGAACAATGTTCGACAATATCCCTAAAGCTCTTGAC
GCCTTACCTGCCATTTGGGGTCTGCAGGGTTCCGCGAAGTGGACCGAAAA
CTTGCCCCGCCTGTCACCTATCTTGATCATGTGA
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Coding sequence (CDS) from alignment at NKJJ01000002.1:3753970..3755453+

>CAN33_27610-T1 ID=CAN33_27610-T1|Name=CAN33_27610-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2850bp|location=Sequence derived from alignment at NKJJ01000002.1:3753970..3755453+ (Aspergillus niger FDAARGOS_311)
ATGGTCGCGACGGACTCCGGTAGTAATCCCCAGTCGCGAGGATGCTTTCA
ATGCTCAAAACGCCGGATTGTCTGCGACAGAGGGGAACCTACCTGCTTCA
AGTGTCAGAAGAAAGGGATTGAATGCTCGGGATCCGGTCGCTTTCGCTTC
AGCCCCGGCCTAGCGAGTCGGGGAAAACTCAAAGGCTGCACGATTCCGAT
ACCTGATGTCGACCCGAGATCGGTATACAAAGAAGGCTTAGATGGCCCTC
GTCCGATTCGGTGGAAGGATGACCTGAATAGAGTCAACAAAAACCAGAAG
CCCAGACTTAGCGGGAAGGAGCGGGTAGTCCGGAATGGACTGGTCACAGA
GAGGGGTTCGGCCAGTGGAGGCAGAGCTCTCGCACAATCGATATCTATCG
CAAACCAGGACGTTATCCTTAGCTCAGGACAAGAATTGTATAGGAACATG
CCTTCTGAGGACCCCCGGCCATCCTCAATAGTGGAGACGTCTGTTGGCCA
GTGGATCGCACCAGTCGATTACAGAACCCGCGAATCATTCGACTACTTCG
CGAAATACGTCGCTCCTGTCATGGTTGTTCTTGATATATCCAATGGCTAC
CGGGACATTATCCTCCCCATGGCTTTTGAAGACAGCCTTCTACAACAGGC
CGTTGCTGTTGTGGCCGCGCAACATCTTGGTTCCCGACACCCCTCATGTC
GAGCGGCGACCGAGTCCAGCCGGTCGGCAATAATATCTCGCTTACGACGT
GATTCTCAGCTTGGTTCGCCCGATCTCGTGTTTAATTCATCCACTTGGGC
AACTCTGATCGTGCTACTTGTTGGGGAAACCGTCACCGGAAGCTCCGAGT
ATAGCCACCTGTTACGGACTCTCCTCACCCTGGCCCAAAACATGAGAAGC
GTCGGAAATACCGAGCTGAGAGATTTTCTCACAAAGCAGACGGACATGTT
TGCGTTCCTTGGACAGCCACTTTTAAACGAAGACCTGGGCGCGGAGAGAC
TTAGAAATCCGGTTGATCCAAGTGTCTGGATGGCTTCGAGAGTTAACGCT
GATTCGCACCATCACAGAACATTGTCACTTGTCAGGAAAGTCTTCTCGAA
GGGTGCACAGATATATCTTCAGCGTGCGACTACAAACCAAAGCTCGTGGC
AAGTTTTGGAAGAGCTGCGCCAGCTTCTTTGTCAGATGAGCCCCACGGAG
CCAGGTGCCCATGGATTCGTATGGTCATGCTTCATTGCAGCAGCGGATAG
CGTGGATCCCGAGCACAGGGCTTTCTTCAGCGAATACTTGAAAGGGGTAT
ATTCACGAACAATGTTCGACAATATCCCTAAAGCTCTTGACGCCTTACCT
GCCATTTGGGGTCTGCAGGGTTCCGCGAAGTGGACCGAAAACTTGCCCCG
CCTGTCACCTATCTTGATCATGTGAATGGTCGCGACGGACTCCGGTAGTA
ATCCCCAGTCGCGAGGATGCTTTCAATGCTCAAAACGCCGGATTGTCTGC
GACAGAGGGGAACCTACCTGCTTCAAGTGTCAGAAGAAAGGGATTGAATG
CTCGGGATCCGGTCGCTTTCGCTTCAGCCCCGGCCTAGCGAGTCGGGGAA
AACTCAAAGGCTGCACGATTCCGATACCTGATGTCGACCCGAGATCGGTA
TACAAAGAAGGCTTAGATGGCCCTCGTCCGATTCGGTGGAAGGATGACCT
GAATAGAGTCAACAAAAACCAGAAGCCCAGACTTAGCGGGAAGGAGCGGG
TAGTCCGGAATGGACTGGTCACAGAGAGGGGTTCGGCCAGTGGAGGCAGA
GCTCTCGCACAATCGATATCTATCGCAAACCAGGACGTTATCCTTAGCTC
AGGACAAGAATTGTATAGGAACATGCCTTCTGAGGACCCCCGGCCATCCT
CAATAGTGGAGACGTCTGTTGGCCAGTGGATCGCACCAGTCGATTACAGA
ACCCGCGAATCATTCGACTACTTCGCGAAATACGTCGCTCCTGTCATGGT
TGTTCTTGATATATCCAATGGCTACCGGGACATTATCCTCCCCATGGCTT
TTGAAGACAGCCTTCTACAACAGGCCGTTGCTGTTGTGGCCGCGCAACAT
CTTGGTTCCCGACACCCCTCATGTCGAGCGGCGACCGAGTCCAGCCGGTC
GGCAATAATATCTCGCTTACGACGTGATTCTCAGCTTGGTTCGCCCGATC
TCGTGTTTAATTCATCCACTTGGGCAACTCTGATCGTGCTACTTGTTGGG
GAAACCGTCACCGGAAGCTCCGAGTATAGCCACCTGTTACGGACTCTCCT
CACCCTGGCCCAAAACATGAGAAGCGTCGGAAATACCGAGCTGAGAGATT
TTCTCACAAAGCAGACGGACATGTTTGCGTTCCTTGGACAGCCACTTTTA
AACGAAGACCTGGGCGCGGAGAGACTTAGAAATCCGGTTGATCCAAGTGT
CTGGATGGCTTCGAGAGTTAACGCTGATTCGCACCATCACAGAACATTGT
CACTTGTCAGGAAAGTCTTCTCGAAGGGTGCACAGATATATCTTCAGCGT
GCGACTACAAACCAAAGCTCGTGGCAAGTTTTGGAAGAGCTGCGCCAGCT
TCTTTGTCAGATGAGCCCCACGGAGCCAGGTGCCCATGGATTCGTATGGT
CATGCTTCATTGCAGCAGCGGATAGCGTGGATCCCGAGCACAGGGCTTTC
TTCAGCGAATACTTGAAAGGGGTATATTCACGAACAATGTTCGACAATAT
CCCTAAAGCTCTTGACGCCTTACCTGCCATTTGGGGTCTGCAGGGTTCCG
CGAAGTGGACCGAAAACTTGCCCCGCCTGTCACCTATCTTGATCATGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_27610CAN33_27610Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_27610-T1.exon1CAN33_27610-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_27610-T1.exon2CAN33_27610-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_27610-T1.cdsCAN33_27610-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_27610-T1CAN33_27610-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR021858
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
ProductFungal specific transcription factor domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:3753970..3755453 +
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