You are here

Home

CAN33_28245-T1, CAN33_28245-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_28245-T1
Unique NameCAN33_28245-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:4116102..4117832+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_28245-T1 ID=CAN33_28245-T1|Name=CAN33_28245-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1731bp|location=Sequence derived from alignment at NKJJ01000002.1:4116102..4117832+ (Aspergillus niger FDAARGOS_311)
ATGAGCTTGGGCCTGGAGAAGGGCCGGTCCTCCGAGCTTATTGGACTTGG
CGGAGAACACGACTGGCAATTACTTCGCACTTGCCCCATTGGACAGTCCG
CATCAATAGGTACCGCTGACCGAAATGGTCTGGATGCCACTTATCAGCAT
GCCTCAAATATCAGAACAATGCGTAAAGTTCACGAAGGGATATTATTCCA
AATGACCCCGGATGCGGTATCTTCCCAGCATGCAGCTAAGAATTTAATGC
AAGAGGAAGTGGACATTGATAACATCGAAGCACTAGCTCATCCTCACGGA
CCTGCTTTAGTCAACCTGTATTTCCGCATTATCCACCCATCATTCCCTAT
CCTGCACAAGGAGGTCTTTATCGAAAAGTACAATCGGACGTATCGCGAAA
TCGTCCCACATTTACTGGCGGCTGTCTATGCCCTGGCTGTACGTTGGTGG
GCTTACGATGCAGATCTCCTTTTGGAGGAGAAGGTAGACGAGGATGCGCT
GGTCAGGATTGCTTCCCAGTCGGTGCAGAATGCAATGCACCACCCTCGGC
TGAACACAATTCAGGCAGGACTTCTACTCTTGCAACGTGGTCGAGATGCT
TCTTCTGCGGACAATTCTTGGACATGGTCGTTCACGGCTTCGCTGATTGG
GCTAGGTCAACATTTAGGCCTTCATCTTGATTGTATTACCTGGGCTATAC
CGGAATGGGAAAAAGGTCTTCGACGGAGACTGGCCTGGGCATTGTTCATC
CAAGATTCCTTCTCTGCAATGGTATTCGGCCGACCCTGTCTGATTTCGAT
GAGGGACTGGGCCGTTGCGCCTTTGCAAACATGCGATTTCTCAGAGAACA
GCCCAGACGAGGTTGCCGGAAGAGACGGTGGTGGTAGCTCGAGCATAGAA
AATGGCAAGCTTCTCTTCATGGAGCTTGCCAAACTAAGTACTATCACTGC
TCGCGTGCTGCAACAGTTATATTCAGTCCAGGCTCTGGCCACTGTGACCG
AGCCCCAGCAAGTGCTCGCCCTGGGAAAGCCCTTAGGGAATGATCTGGCC
GATTTACTGAAGAACTTGCCACCTAATCTCAATATTGAAAACCTGCAGCA
AGGCCGGCTCTGCTTGAGCGGCTTTTTTCATTTCGCACTTCAAGCTACCA
CAGCTGTCCTCGATCGGCGCATGCTTTGGGCACTCCAAAGGTCCCCTGCC
GGCGTTGACACTCAATTTGCCCAGATTTTTCGGACCGCTCTACGACAACG
TGCTTATAACCTGGTCCAACTTGTCTCTCAGCTACAACCTGAGCACATGG
AAGCGTTTTGGTTCTTCGCTGCCGGTAGCTGTGGTGTCATTCTCGGTTGT
TTTCTGGCACTTCTTAGAGTGACCAGCACCACGCTCGAGGAATCCGACGA
GCTCAAGGGTCTCATGAATGAGTTCGAATGGCAACTTAGAATCAAAGTGA
GAATGGGCGAGTGGGTGTTATACACGCTTGCCCGGTTGAAGACTTTGGGC
TGGGATGAGTGGAAGGCCTTGGAGCCCGACTTTGATGCCATTCCAGGAGA
TCATCAGCGGCTTGGAGCTCTGCAGAGCAATGCAGTGGACACAGGAGATC
CAGCACATTCGTTGCTCTCGGCCATGAACAGTGAATCATCGAGTGTGCCA
CTGCAAGAGAACAATTCCGCCACATGGCTGACCGAGGAACTTGAAGACTT
GGGAATTCCGTGGGATCTTGGAGGAACCTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000002.1:4116102..4117832+

>CAN33_28245-T1 ID=CAN33_28245-T1|Name=CAN33_28245-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1731bp|location=Sequence derived from alignment at NKJJ01000002.1:4116102..4117832+ (Aspergillus niger FDAARGOS_311)
ATGAGCTTGGGCCTGGAGAAGGGCCGGTCCTCCGAGCTTATTGGACTTGG
CGGAGAACACGACTGGCAATTACTTCGCACTTGCCCCATTGGACAGTCCG
CATCAATAGGTACCGCTGACCGAAATGGTCTGGATGCCACTTATCAGCAT
GCCTCAAATATCAGAACAATGCGTAAAGTTCACGAAGGGATATTATTCCA
AATGACCCCGGATGCGGTATCTTCCCAGCATGCAGCTAAGAATTTAATGC
AAGAGGAAGTGGACATTGATAACATCGAAGCACTAGCTCATCCTCACGGA
CCTGCTTTAGTCAACCTGTATTTCCGCATTATCCACCCATCATTCCCTAT
CCTGCACAAGGAGGTCTTTATCGAAAAGTACAATCGGACGTATCGCGAAA
TCGTCCCACATTTACTGGCGGCTGTCTATGCCCTGGCTGTACGTTGGTGG
GCTTACGATGCAGATCTCCTTTTGGAGGAGAAGGTAGACGAGGATGCGCT
GGTCAGGATTGCTTCCCAGTCGGTGCAGAATGCAATGCACCACCCTCGGC
TGAACACAATTCAGGCAGGACTTCTACTCTTGCAACGTGGTCGAGATGCT
TCTTCTGCGGACAATTCTTGGACATGGTCGTTCACGGCTTCGCTGATTGG
GCTAGGTCAACATTTAGGCCTTCATCTTGATTGTATTACCTGGGCTATAC
CGGAATGGGAAAAAGGTCTTCGACGGAGACTGGCCTGGGCATTGTTCATC
CAAGATTCCTTCTCTGCAATGGTATTCGGCCGACCCTGTCTGATTTCGAT
GAGGGACTGGGCCGTTGCGCCTTTGCAAACATGCGATTTCTCAGAGAACA
GCCCAGACGAGGTTGCCGGAAGAGACGGTGGTGGTAGCTCGAGCATAGAA
AATGGCAAGCTTCTCTTCATGGAGCTTGCCAAACTAAGTACTATCACTGC
TCGCGTGCTGCAACAGTTATATTCAGTCCAGGCTCTGGCCACTGTGACCG
AGCCCCAGCAAGTGCTCGCCCTGGGAAAGCCCTTAGGGAATGATCTGGCC
GATTTACTGAAGAACTTGCCACCTAATCTCAATATTGAAAACCTGCAGCA
AGGCCGGCTCTGCTTGAGCGGCTTTTTTCATTTCGCACTTCAAGCTACCA
CAGCTGTCCTCGATCGGCGCATGCTTTGGGCACTCCAAAGGTCCCCTGCC
GGCGTTGACACTCAATTTGCCCAGATTTTTCGGACCGCTCTACGACAACG
TGCTTATAACCTGGTCCAACTTGTCTCTCAGCTACAACCTGAGCACATGG
AAGCGTTTTGGTTCTTCGCTGCCGGTAGCTGTGGTGTCATTCTCGGTTGT
TTTCTGGCACTTCTTAGAGTGACCAGCACCACGCTCGAGGAATCCGACGA
GCTCAAGGGTCTCATGAATGAGTTCGAATGGCAACTTAGAATCAAAGTGA
GAATGGGCGAGTGGGTGTTATACACGCTTGCCCGGTTGAAGACTTTGGGC
TGGGATGAGTGGAAGGCCTTGGAGCCCGACTTTGATGCCATTCCAGGAGA
TCATCAGCGGCTTGGAGCTCTGCAGAGCAATGCAGTGGACACAGGAGATC
CAGCACATTCGTTGCTCTCGGCCATGAACAGTGAATCATCGAGTGTGCCA
CTGCAAGAGAACAATTCCGCCACATGGCTGACCGAGGAACTTGAAGACTT
GGGAATTCCGTGGGATCTTGGAGGAACCTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_28245CAN33_28245Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_28245-T1.exon1CAN33_28245-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_28245-T1.cdsCAN33_28245-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_28245-T1CAN33_28245-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR007219
DBxrefPFAM:PF04082
ProductFungal specific transcription factor domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:4116102..4117832 +
Powered by Drupal