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CAN33_28305-T1, CAN33_28305-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_28305-T1
Unique NameCAN33_28305-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000008.1:77011..79281-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_28305-T1 ID=CAN33_28305-T1|Name=CAN33_28305-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2271bp|location=Sequence derived from alignment at NKJJ01000008.1:77011..79281- (Aspergillus niger FDAARGOS_311)
ATGGAAACCAGCATTTCTGAGCTAGTTGAGAGACTAGGAAGTGACGAAGA
TGCGGTGCGCAAAATGGCAGTTTTCAAACTTCAGGGGAGCATTGGGGATC
CCTCCTTTGCCGATAATTTCATCGCAGAAGGTGGACTCACTAGGTTACGC
TACTTGACTCTACATGCGAGTGGTAACACCTTGGCATATAGCCTCACAAG
CTTCGCCAGAATCCTAGAAGTTGACAAAGGCTGGGATCTAGTAGATCAAG
ATATGGTTGAAAGAGTAGGTAACATGAACAAGCTCTCCGTCTCTTCTATA
ACATACTCCCGCAAACCACCTTATATAGTAACATACTGATATATTGTACC
GTCTTCTCTTTCCAGGTTGTTGAACTTATAGTGACACACCCATTGGTCAA
CATCCTAAGGGGTGCAATGTCTATATTAGTATCCATAGTGTCACATCCTT
ACTCGGGTAATCACTTATCACAAGATGGAAATTTTGGGTTTCGTGCATTG
AAGCCCGCAATTGCCATTTACCCGCAGTTTTTGGAAATGCTTGTCAATAG
ACTTTCGTCTGCAGACCATGCCCTCTGTGCAAATGCACTTCAGTTGATCA
ATTCGCTCATGCGCGACTCTATCACGAACGACGCAGATACGGAATGGCCA
AAGTTTATTCAGAAGCTACAAGATCTCGGTGTGATTAGAGCAGTCTACTC
CCTCATGCAAGGTAGTGCCCTGCAGGATCACGTGCACCCATTGATCGAAT
TCCAGTCTCTTACCAAAGTTCTTCTGAGGAAATGGAGAGAGATATATCTG
GATCTGGAGAGACCGGAGCACAGGAGAGCCTTGAAAGGGATCTATTTGGC
TAGCTCACATGAGCGGGGTCAAGAGAAGGGAGTCGAGAATGGTGATGAGA
TGCGACAGTCTAAGAAACATAGTTCTGAGAAATGGAGACGTCTTGGTTTC
GAGACGGAAAGTCCTTCGACGCAGTTTGAGGATACCGGGTTCTTGGGAAT
GATGGATTTGGCAGACTATGTCAGAAACCATCAAGATGAGTTCCAAAAAA
TGCTCCTGGAGCAGTCCACGAAGCCTCCTCAGCAGCGATGTCCCATTGCT
CGTGCCTCACTGTCTGTCACCTCGATATTGTACCAGCATTTTGAGGTGGA
CAAATCGGAGATGGATGATTCCAAGGGCTATCTTCTACTAGAGTCTCGCT
CTAACCTTGATAAGGTTTTTGAGCCTCTGCTGTTGCATTGGACCAGATTG
CATGTAGCGGGGTTACATGCTTTCTTTCGTCTGTGGAAGGCTACCGGAGC
GGAAGTCGAAGACTACGGAAAGATCGTTGAGCTGATCCGGATCTTAATCG
AGTCTGTCGTTGGTGGGGCTCCTAGGACAAAGGATGTGCAAGAAGTGGAA
GAAGAACTAGCGAACTTTGAGTATGGTCGGCTCCGCGAACTGCAAATGGA
GTTGTTGGAGCTCGCGTATGAAGATGCCTGGGGCCAACACCTGCAGCAGA
TGCGCGAAGAATTGTATCACGAAGCACTTCAATTCGTTAAAGAACAGAGA
ATCCGCTGCCTGTTGCACGGTGCATGGTTCCTCAACGAGGGCCCTATTAG
TTCAGATGCGGGAACCGAGCAACACTCATGGAAATACGCACAACTTTCGC
ACAACAGGAGATTCTTACACTTTGGTGATTTTAATGCCATTCTTGAGAGG
CGCCCGGAGCTCGATACTTTACCCGAGAAGAGTAAGTTTGCTTCTTTGAT
GTTGTGCGTGGTCTGTTCTGTCCTTGATTTCAAGCTGACTGCGCTTTACA
CCTTCAGTCGACCTTTCATTGGTATCTTCAGTGGTCTCCAATGTCTCTGC
TTCCTCCAAAGATCAGTCGACGGCGCCTGCAAAGGACATGCCCCATGCTG
TGTCTTATACTAAGATCACCGTGCACGGATACTCGCAGCCTGTACACGAG
ACTGGAGATATCCACAAAAGTAATGGCCATCGCCGAACCTCGAGCAGATC
AGCGCAAGGTGAATCTGCGCTGTTGAGTTTCTGTCCGCAATCCACTAGTG
TCGCATCCGAATGGCTTGATGGGTTGCTTATGCTTCTCAACCAGCAGCCT
ATAACCGCGGAGACAAACAAACTTATAAGCTTGGTTAGTGATTACGGTCT
CAAAATTCGTTTGTTGAATGTTCGCTTCGACGATGTAGCCTTCGCGGGTG
AAGCACCCCAAGTTCCCACGCGAGATGGCCTTGATGACAATTACTACTAT
GACGTCTTTGGTGGCTCATAA
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Coding sequence (CDS) from alignment at NKJJ01000008.1:77011..79281-

>CAN33_28305-T1 ID=CAN33_28305-T1|Name=CAN33_28305-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6282bp|location=Sequence derived from alignment at NKJJ01000008.1:77011..79281- (Aspergillus niger FDAARGOS_311)
TCGACCTTTCATTGGTATCTTCAGTGGTCTCCAATGTCTCTGCTTCCTCC
AAAGATCAGTCGACGGCGCCTGCAAAGGACATGCCCCATGCTGTGTCTTA
TACTAAGATCACCGTGCACGGATACTCGCAGCCTGTACACGAGACTGGAG
ATATCCACAAAAGTAATGGCCATCGCCGAACCTCGAGCAGATCAGCGCAA
GGTGAATCTGCGCTGTTGAGTTTCTGTCCGCAATCCACTAGTGTCGCATC
CGAATGGCTTGATGGGTTGCTTATGCTTCTCAACCAGCAGCCTATAACCG
CGGAGACAAACAAACTTATAAGCTTGGTTAGTGATTACGGTCTCAAAATT
CGTTTGTTGAATGTTCGCTTCGACGATGTAGCCTTCGCGGGTGAAGCACC
CCAAGTTCCCACGCGAGATGGCCTTGATGACAATTACTACTATGACGTCT
TTGGTGGCTCATAAGTTGTTGAACTTATAGTGACACACCCATTGGTCAAC
ATCCTAAGGGGTGCAATGTCTATATTAGTATCCATAGTGTCACATCCTTA
CTCGGGTAATCACTTATCACAAGATGGAAATTTTGGGTTTCGTGCATTGA
AGCCCGCAATTGCCATTTACCCGCAGTTTTTGGAAATGCTTGTCAATAGA
CTTTCGTCTGCAGACCATGCCCTCTGTGCAAATGCACTTCAGTTGATCAA
TTCGCTCATGCGCGACTCTATCACGAACGACGCAGATACGGAATGGCCAA
AGTTTATTCAGAAGCTACAAGATCTCGGTGTGATTAGAGCAGTCTACTCC
CTCATGCAAGGTAGTGCCCTGCAGGATCACGTGCACCCATTGATCGAATT
CCAGTCTCTTACCAAAGTTCTTCTGAGGAAATGGAGAGAGATATATCTGG
ATCTGGAGAGACCGGAGCACAGGAGAGCCTTGAAAGGGATCTATTTGGCT
AGCTCACATGAGCGGGGTCAAGAGAAGGGAGTCGAGAATGGTGATGAGAT
GCGACAGTCTAAGAAACATAGTTCTGAGAAATGGAGACGTCTTGGTTTCG
AGACGGAAAGTCCTTCGACGCAGTTTGAGGATACCGGGTTCTTGGGAATG
ATGGATTTGGCAGACTATGTCAGAAACCATCAAGATGAGTTCCAAAAAAT
GCTCCTGGAGCAGTCCACGAAGCCTCCTCAGCAGCGATGTCCCATTGCTC
GTGCCTCACTGTCTGTCACCTCGATATTGTACCAGCATTTTGAGGTGGAC
AAATCGGAGATGGATGATTCCAAGGGCTATCTTCTACTAGAGTCTCGCTC
TAACCTTGATAAGGTTTTTGAGCCTCTGCTGTTGCATTGGACCAGATTGC
ATGTAGCGGGGTTACATGCTTTCTTTCGTCTGTGGAAGGCTACCGGAGCG
GAAGTCGAAGACTACGGAAAGATCGTTGAGCTGATCCGGATCTTAATCGA
GTCTGTCGTTGGTGGGGCTCCTAGGACAAAGGATGTGCAAGAAGTGGAAG
AAGAACTAGCGAACTTTGAGTATGGTCGGCTCCGCGAACTGCAAATGGAG
TTGTTGGAGCTCGCGTATGAAGATGCCTGGGGCCAACACCTGCAGCAGAT
GCGCGAAGAATTGTATCACGAAGCACTTCAATTCGTTAAAGAACAGAGAA
TCCGCTGCCTGTTGCACGGTGCATGGTTCCTCAACGAGGGCCCTATTAGT
TCAGATGCGGGAACCGAGCAACACTCATGGAAATACGCACAACTTTCGCA
CAACAGGAGATTCTTACACTTTGGTGATTTTAATGCCATTCTTGAGAGGC
GCCCGGAGCTCGATACTTTACCCGAGAAGAATGGAAACCAGCATTTCTGA
GCTAGTTGAGAGACTAGGAAGTGACGAAGATGCGGTGCGCAAAATGGCAG
TTTTCAAACTTCAGGGGAGCATTGGGGATCCCTCCTTTGCCGATAATTTC
ATCGCAGAAGGTGGACTCACTAGGTTACGCTACTTGACTCTACATGCGAG
TGGTAACACCTTGGCATATAGCCTCACAAGCTTCGCCAGAATCCTAGAAG
TTGACAAAGGCTGGGATCTAGTAGATCAAGATATGGTTGAAAGATCGACC
TTTCATTGGTATCTTCAGTGGTCTCCAATGTCTCTGCTTCCTCCAAAGAT
CAGTCGACGGCGCCTGCAAAGGACATGCCCCATGCTGTGTCTTATACTAA
GATCACCGTGCACGGATACTCGCAGCCTGTACACGAGACTGGAGATATCC
ACAAAAGTAATGGCCATCGCCGAACCTCGAGCAGATCAGCGCAAGGTGAA
TCTGCGCTGTTGAGTTTCTGTCCGCAATCCACTAGTGTCGCATCCGAATG
GCTTGATGGGTTGCTTATGCTTCTCAACCAGCAGCCTATAACCGCGGAGA
CAAACAAACTTATAAGCTTGGTTAGTGATTACGGTCTCAAAATTCGTTTG
TTGAATGTTCGCTTCGACGATGTAGCCTTCGCGGGTGAAGCACCCCAAGT
TCCCACGCGAGATGGCCTTGATGACAATTACTACTATGACGTCTTTGGTG
GCTCATAAGTTGTTGAACTTATAGTGACACACCCATTGGTCAACATCCTA
AGGGGTGCAATGTCTATATTAGTATCCATAGTGTCACATCCTTACTCGGG
TAATCACTTATCACAAGATGGAAATTTTGGGTTTCGTGCATTGAAGCCCG
CAATTGCCATTTACCCGCAGTTTTTGGAAATGCTTGTCAATAGACTTTCG
TCTGCAGACCATGCCCTCTGTGCAAATGCACTTCAGTTGATCAATTCGCT
CATGCGCGACTCTATCACGAACGACGCAGATACGGAATGGCCAAAGTTTA
TTCAGAAGCTACAAGATCTCGGTGTGATTAGAGCAGTCTACTCCCTCATG
CAAGGTAGTGCCCTGCAGGATCACGTGCACCCATTGATCGAATTCCAGTC
TCTTACCAAAGTTCTTCTGAGGAAATGGAGAGAGATATATCTGGATCTGG
AGAGACCGGAGCACAGGAGAGCCTTGAAAGGGATCTATTTGGCTAGCTCA
CATGAGCGGGGTCAAGAGAAGGGAGTCGAGAATGGTGATGAGATGCGACA
GTCTAAGAAACATAGTTCTGAGAAATGGAGACGTCTTGGTTTCGAGACGG
AAAGTCCTTCGACGCAGTTTGAGGATACCGGGTTCTTGGGAATGATGGAT
TTGGCAGACTATGTCAGAAACCATCAAGATGAGTTCCAAAAAATGCTCCT
GGAGCAGTCCACGAAGCCTCCTCAGCAGCGATGTCCCATTGCTCGTGCCT
CACTGTCTGTCACCTCGATATTGTACCAGCATTTTGAGGTGGACAAATCG
GAGATGGATGATTCCAAGGGCTATCTTCTACTAGAGTCTCGCTCTAACCT
TGATAAGGTTTTTGAGCCTCTGCTGTTGCATTGGACCAGATTGCATGTAG
CGGGGTTACATGCTTTCTTTCGTCTGTGGAAGGCTACCGGAGCGGAAGTC
GAAGACTACGGAAAGATCGTTGAGCTGATCCGGATCTTAATCGAGTCTGT
CGTTGGTGGGGCTCCTAGGACAAAGGATGTGCAAGAAGTGGAAGAAGAAC
TAGCGAACTTTGAGTATGGTCGGCTCCGCGAACTGCAAATGGAGTTGTTG
GAGCTCGCGTATGAAGATGCCTGGGGCCAACACCTGCAGCAGATGCGCGA
AGAATTGTATCACGAAGCACTTCAATTCGTTAAAGAACAGAGAATCCGCT
GCCTGTTGCACGGTGCATGGTTCCTCAACGAGGGCCCTATTAGTTCAGAT
GCGGGAACCGAGCAACACTCATGGAAATACGCACAACTTTCGCACAACAG
GAGATTCTTACACTTTGGTGATTTTAATGCCATTCTTGAGAGGCGCCCGG
AGCTCGATACTTTACCCGAGAAGAATGGAAACCAGCATTTCTGAGCTAGT
TGAGAGACTAGGAAGTGACGAAGATGCGGTGCGCAAAATGGCAGTTTTCA
AACTTCAGGGGAGCATTGGGGATCCCTCCTTTGCCGATAATTTCATCGCA
GAAGGTGGACTCACTAGGTTACGCTACTTGACTCTACATGCGAGTGGTAA
CACCTTGGCATATAGCCTCACAAGCTTCGCCAGAATCCTAGAAGTTGACA
AAGGCTGGGATCTAGTAGATCAAGATATGGTTGAAAGATCGACCTTTCAT
TGGTATCTTCAGTGGTCTCCAATGTCTCTGCTTCCTCCAAAGATCAGTCG
ACGGCGCCTGCAAAGGACATGCCCCATGCTGTGTCTTATACTAAGATCAC
CGTGCACGGATACTCGCAGCCTGTACACGAGACTGGAGATATCCACAAAA
GTAATGGCCATCGCCGAACCTCGAGCAGATCAGCGCAAGGTGAATCTGCG
CTGTTGAGTTTCTGTCCGCAATCCACTAGTGTCGCATCCGAATGGCTTGA
TGGGTTGCTTATGCTTCTCAACCAGCAGCCTATAACCGCGGAGACAAACA
AACTTATAAGCTTGGTTAGTGATTACGGTCTCAAAATTCGTTTGTTGAAT
GTTCGCTTCGACGATGTAGCCTTCGCGGGTGAAGCACCCCAAGTTCCCAC
GCGAGATGGCCTTGATGACAATTACTACTATGACGTCTTTGGTGGCTCAT
AAGTTGTTGAACTTATAGTGACACACCCATTGGTCAACATCCTAAGGGGT
GCAATGTCTATATTAGTATCCATAGTGTCACATCCTTACTCGGGTAATCA
CTTATCACAAGATGGAAATTTTGGGTTTCGTGCATTGAAGCCCGCAATTG
CCATTTACCCGCAGTTTTTGGAAATGCTTGTCAATAGACTTTCGTCTGCA
GACCATGCCCTCTGTGCAAATGCACTTCAGTTGATCAATTCGCTCATGCG
CGACTCTATCACGAACGACGCAGATACGGAATGGCCAAAGTTTATTCAGA
AGCTACAAGATCTCGGTGTGATTAGAGCAGTCTACTCCCTCATGCAAGGT
AGTGCCCTGCAGGATCACGTGCACCCATTGATCGAATTCCAGTCTCTTAC
CAAAGTTCTTCTGAGGAAATGGAGAGAGATATATCTGGATCTGGAGAGAC
CGGAGCACAGGAGAGCCTTGAAAGGGATCTATTTGGCTAGCTCACATGAG
CGGGGTCAAGAGAAGGGAGTCGAGAATGGTGATGAGATGCGACAGTCTAA
GAAACATAGTTCTGAGAAATGGAGACGTCTTGGTTTCGAGACGGAAAGTC
CTTCGACGCAGTTTGAGGATACCGGGTTCTTGGGAATGATGGATTTGGCA
GACTATGTCAGAAACCATCAAGATGAGTTCCAAAAAATGCTCCTGGAGCA
GTCCACGAAGCCTCCTCAGCAGCGATGTCCCATTGCTCGTGCCTCACTGT
CTGTCACCTCGATATTGTACCAGCATTTTGAGGTGGACAAATCGGAGATG
GATGATTCCAAGGGCTATCTTCTACTAGAGTCTCGCTCTAACCTTGATAA
GGTTTTTGAGCCTCTGCTGTTGCATTGGACCAGATTGCATGTAGCGGGGT
TACATGCTTTCTTTCGTCTGTGGAAGGCTACCGGAGCGGAAGTCGAAGAC
TACGGAAAGATCGTTGAGCTGATCCGGATCTTAATCGAGTCTGTCGTTGG
TGGGGCTCCTAGGACAAAGGATGTGCAAGAAGTGGAAGAAGAACTAGCGA
ACTTTGAGTATGGTCGGCTCCGCGAACTGCAAATGGAGTTGTTGGAGCTC
GCGTATGAAGATGCCTGGGGCCAACACCTGCAGCAGATGCGCGAAGAATT
GTATCACGAAGCACTTCAATTCGTTAAAGAACAGAGAATCCGCTGCCTGT
TGCACGGTGCATGGTTCCTCAACGAGGGCCCTATTAGTTCAGATGCGGGA
ACCGAGCAACACTCATGGAAATACGCACAACTTTCGCACAACAGGAGATT
CTTACACTTTGGTGATTTTAATGCCATTCTTGAGAGGCGCCCGGAGCTCG
ATACTTTACCCGAGAAGAATGGAAACCAGCATTTCTGAGCTAGTTGAGAG
ACTAGGAAGTGACGAAGATGCGGTGCGCAAAATGGCAGTTTTCAAACTTC
AGGGGAGCATTGGGGATCCCTCCTTTGCCGATAATTTCATCGCAGAAGGT
GGACTCACTAGGTTACGCTACTTGACTCTACATGCGAGTGGTAACACCTT
GGCATATAGCCTCACAAGCTTCGCCAGAATCCTAGAAGTTGACAAAGGCT
GGGATCTAGTAGATCAAGATATGGTTGAAAGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_28305CAN33_28305Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_28305-T1CAN33_28305-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_28305-T1.cdsCAN33_28305-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_28305-T1.exon3CAN33_28305-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_28305-T1.exon2CAN33_28305-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_28305-T1.exon1CAN33_28305-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR016024
DBxrefInterPro:IPR024574
DBxrefInterPro:IPR011989
DBxrefInterPro:IPR001849
DBxrefInterPro:IPR006816
DBxrefPFAM:PF16457
DBxrefPFAM:PF04727
DBxrefPFAM:PF11841
ProductELMO/CED-12 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000008.1supercontigNKJJ01000008.1:77011..79281 -
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