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CAN33_28345-T1, CAN33_28345-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_28345-T1
Unique NameCAN33_28345-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000008.1:102652..103577-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_28345-T1 ID=CAN33_28345-T1|Name=CAN33_28345-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=926bp|location=Sequence derived from alignment at NKJJ01000008.1:102652..103577- (Aspergillus niger FDAARGOS_311)
ATGGCCGAAGTCGCCCAACCGGTTCCTGCTGAGTCGCAGGCCAAGCATGT
TGTTTACTGTGGAGGTACGTCGTCTCTTCTCGTCTCTGATATCGCTTTTG
AAAGCGATGTTTTCTGAGGGAATTAAAATTTAACTGATCGTCTGATGTGA
ACAGTTTGCACATTGCCTCCGGAGGTACGCTTACATATATACATACGCCC
TATGCACTCGATCTTAAGGCCCATCTTCATCTGCGAGGACGAAGCCACTC
TGCTCCTTCCAGCAATATATTATTTAGACCCTCCAAAGAGGGCATATGGC
AGCCAGCTAACCTCGAATCCGGAATCGTCTAGTACTGTGAATTCGGTGGC
ACGGCCAAGAAATGCGAGGAATGGTTGAAGGACGCTCATCCGGACATGTA
CCAGTCGTTATATTCTGAGGGTTCGTTGTTATTTCCCTCTTCTTCTCGGA
TTTCCCGGGTGTTCAGCTCAGCTCGCTAACTTACGGTCTATTTGTCTTAT
GTAGAGGCCCTCAACTCTAATCTTGCTACATTGTCGGTATCGGCTCGGGA
GCGCGCAGCTAAGGATGCGGCGAAGAAGGAGGCTAAGGCTGCTGCGGCTG
AGGCGCGCGATGCTGAGCGGAAGGCGGCGTCTAAGGTACAGATTAAGCGG
GTTGAGCGGAACAAGCGGAAACATGTTACTGTTATCACGGGGTTGGATAT
ATATGGGTTGGAGAATAAGAAGATCGCTAAGGATCTGGGCAAGAAGTTCG
CTACTGGTTCTTCAATGACTAGGTCTGCGGGTGGAACTGAGGAAATTACC
GTGCAGGGTGATGTAAGTGATGATGTTAAGGAATGGCTGCTCGAGGTGTA
CGGGAAGGAGATCCCGGAGGCCAATATTGAGCTCATTGAGGATAAGAAGA
AGAAGAAGGCGACTGAAGCGCCCTGA
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Coding sequence (CDS) from alignment at NKJJ01000008.1:102652..103577-

>CAN33_28345-T1 ID=CAN33_28345-T1|Name=CAN33_28345-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2376bp|location=Sequence derived from alignment at NKJJ01000008.1:102652..103577- (Aspergillus niger FDAARGOS_311)
AGGCCCTCAACTCTAATCTTGCTACATTGTCGGTATCGGCTCGGGAGCGC
GCAGCTAAGGATGCGGCGAAGAAGGAGGCTAAGGCTGCTGCGGCTGAGGC
GCGCGATGCTGAGCGGAAGGCGGCGTCTAAGGTACAGATTAAGCGGGTTG
AGCGGAACAAGCGGAAACATGTTACTGTTATCACGGGGTTGGATATATAT
GGGTTGGAGAATAAGAAGATCGCTAAGGATCTGGGCAAGAAGTTCGCTAC
TGGTTCTTCAATGACTAGGTCTGCGGGTGGAACTGAGGAAATTACCGTGC
AGGGTGATGTAAGTGATGATGTTAAGGAATGGCTGCTCGAGGTGTACGGG
AAGGAGATCCCGGAGGCCAATATTGAGCTCATTGAGGATAAGAAGAAGAA
GAAGGCGACTGAAGCGCCCTGATACTGTGAATTCGGTGGCACGGCCAAGA
AATGCGAGGAATGGTTGAAGGACGCTCATCCGGACATGTACCAGTCGTTA
TATTCTGAGGTTTGCACATTGCCTCCGGAGATGGCCGAAGTCGCCCAACC
GGTTCCTGCTGAGTCGCAGGCCAAGCATGTTGTTTACTGTGGAGAGGCCC
TCAACTCTAATCTTGCTACATTGTCGGTATCGGCTCGGGAGCGCGCAGCT
AAGGATGCGGCGAAGAAGGAGGCTAAGGCTGCTGCGGCTGAGGCGCGCGA
TGCTGAGCGGAAGGCGGCGTCTAAGGTACAGATTAAGCGGGTTGAGCGGA
ACAAGCGGAAACATGTTACTGTTATCACGGGGTTGGATATATATGGGTTG
GAGAATAAGAAGATCGCTAAGGATCTGGGCAAGAAGTTCGCTACTGGTTC
TTCAATGACTAGGTCTGCGGGTGGAACTGAGGAAATTACCGTGCAGGGTG
ATGTAAGTGATGATGTTAAGGAATGGCTGCTCGAGGTGTACGGGAAGGAG
ATCCCGGAGGCCAATATTGAGCTCATTGAGGATAAGAAGAAGAAGAAGGC
GACTGAAGCGCCCTGATACTGTGAATTCGGTGGCACGGCCAAGAAATGCG
AGGAATGGTTGAAGGACGCTCATCCGGACATGTACCAGTCGTTATATTCT
GAGGTTTGCACATTGCCTCCGGAGATGGCCGAAGTCGCCCAACCGGTTCC
TGCTGAGTCGCAGGCCAAGCATGTTGTTTACTGTGGAGAGGCCCTCAACT
CTAATCTTGCTACATTGTCGGTATCGGCTCGGGAGCGCGCAGCTAAGGAT
GCGGCGAAGAAGGAGGCTAAGGCTGCTGCGGCTGAGGCGCGCGATGCTGA
GCGGAAGGCGGCGTCTAAGGTACAGATTAAGCGGGTTGAGCGGAACAAGC
GGAAACATGTTACTGTTATCACGGGGTTGGATATATATGGGTTGGAGAAT
AAGAAGATCGCTAAGGATCTGGGCAAGAAGTTCGCTACTGGTTCTTCAAT
GACTAGGTCTGCGGGTGGAACTGAGGAAATTACCGTGCAGGGTGATGTAA
GTGATGATGTTAAGGAATGGCTGCTCGAGGTGTACGGGAAGGAGATCCCG
GAGGCCAATATTGAGCTCATTGAGGATAAGAAGAAGAAGAAGGCGACTGA
AGCGCCCTGATACTGTGAATTCGGTGGCACGGCCAAGAAATGCGAGGAAT
GGTTGAAGGACGCTCATCCGGACATGTACCAGTCGTTATATTCTGAGGTT
TGCACATTGCCTCCGGAGATGGCCGAAGTCGCCCAACCGGTTCCTGCTGA
GTCGCAGGCCAAGCATGTTGTTTACTGTGGAGAGGCCCTCAACTCTAATC
TTGCTACATTGTCGGTATCGGCTCGGGAGCGCGCAGCTAAGGATGCGGCG
AAGAAGGAGGCTAAGGCTGCTGCGGCTGAGGCGCGCGATGCTGAGCGGAA
GGCGGCGTCTAAGGTACAGATTAAGCGGGTTGAGCGGAACAAGCGGAAAC
ATGTTACTGTTATCACGGGGTTGGATATATATGGGTTGGAGAATAAGAAG
ATCGCTAAGGATCTGGGCAAGAAGTTCGCTACTGGTTCTTCAATGACTAG
GTCTGCGGGTGGAACTGAGGAAATTACCGTGCAGGGTGATGTAAGTGATG
ATGTTAAGGAATGGCTGCTCGAGGTGTACGGGAAGGAGATCCCGGAGGCC
AATATTGAGCTCATTGAGGATAAGAAGAAGAAGAAGGCGACTGAAGCGCC
CTGATACTGTGAATTCGGTGGCACGGCCAAGAAATGCGAGGAATGGTTGA
AGGACGCTCATCCGGACATGTACCAGTCGTTATATTCTGAGGTTTGCACA
TTGCCTCCGGAGATGGCCGAAGTCGCCCAACCGGTTCCTGCTGAGTCGCA
GGCCAAGCATGTTGTTTACTGTGGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TMA22CAN33_28345Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_28345-T1CAN33_28345-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_28345-T1.cdsCAN33_28345-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_28345-T1.exon4CAN33_28345-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_28345-T1.exon3CAN33_28345-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_28345-T1.exon2CAN33_28345-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_28345-T1.exon1CAN33_28345-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG092652NQ
DBxrefInterPro:IPR036877
DBxrefInterPro:IPR001950
DBxrefPFAM:PF01253
ProductTranslation machinery-associated protein 22
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000008.1supercontigNKJJ01000008.1:102652..103577 -
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