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CAN33_28855-T1, CAN33_28855-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_28855-T1
Unique NameCAN33_28855-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000008.1:421745..423290+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_28855-T1 ID=CAN33_28855-T1|Name=CAN33_28855-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1546bp|location=Sequence derived from alignment at NKJJ01000008.1:421745..423290+ (Aspergillus niger FDAARGOS_311)
ATGCCTTGCACGCCCAGCCCCTTCAAAGCCCCAGTGCCCAACACCAACCC
GGCTCTGGAAGCCGTGGCAGAGAAGCTTCGCGCCAGCGGCAGCAGAAGAC
TCCTCACCCCAGAAGGCATCGGGGCGCTCTCCACCTCGACGAAGAACATC
ATCGACAATCTATATATCAATGTCCGAAAGAACTGCTGGGCAGACGCCAT
CTGCGAAACCCCAGCAGGCCTCCGCTCTGGTCGAATGGACCCCACAGGTA
GATGGCACCTTCGTAACCCTCACGTCGCCGCCTTCATCGACGACCTCTCC
CACGCCATCCAACTCGGCGATATCTCCGACGTCGACTACTACCTGTCCCG
CAGAATCGCCCTCAACACCTGCGACCGCGAGGGCAACTCCCTGCTCCACC
TAGCACTAGTCTCCGGCCACTTGGACATCGCCCGTCTCCTCCTCGACAGA
GGCGCCAGCCCCCTATACAGCTTTGACCCGGAAGTCCCTGAGCTCGACCA
ACTCTTCCAATGCCCCAGCCGCGTTGCGCCCCAGCTCAGTTCCATCCGCG
TCGACATCCTCCGTCTGCTGCTCAGATACGGCGCCCCTATCCGCCGCTTC
CCCACCCTCAACGTCCTCTTCGACTCCCCCGGATACGCCAACGAACTCCT
CGGTCTGCTCCTCGATAGACATCCGGATATCCTCCACGAACGCTCCAAGT
CAGGCCACACCATCCTCCACTCCGCCGCTGCGCTCGGCACGCCCGAGGCA
TGCGAGTTGCTGCTTACTCGCGCGCCGCACCTCCGCACCACATATACAGA
TTGGGATGTGACGCCGCTGCACATGGCCATTCTGGAGAAAAATGAGCTGA
CAGCCTGCTTCCTCATCTCGGCAGATATGACCCTGCAGATGCGCCACGGG
TACGACCGCACCGAGCTGTTCCTGGCGGCATGTATGGGCCTGCGCCGCGT
CGTGAAGTTGTTGTTGTCTTCTACGGCGTTCTTTGCGTACCCGCCGCAGA
AGTGGGTTTCCGATGCGAAGGCTGCTGTCCGTGTGGCGCTGTATATGGGG
AATACGGAGGTGGTGGATATGATTAGACGGAATTTGGGATTGTATGTGTT
ACCTTTTCACCCCCTTCATGGAAACTTATAAGTAATATTGACTGATATAT
GTTGTGTGTAGATCATGGCACTCCTGTCTATCTCAGTTTCTTACCCGACC
CCGGCCTGTCCTGACCTCTACTAGCATTCGGGGGATTGAGACTAGGAGAT
CGAGGAGTAGACGGGCTAGGAGTGTGAGGGGTGATACTACTAATCAACAG
TGTTCTGTTGAGGCTGGGAGTTCGGCTGCGTCGCTGAGTGGGAATGTGAA
TGTGCCTGCTCCTTCTCATCCGCTCGCTACTGTAACCAATCCGGGGACTG
ATAATCTTATGGACAGCGACGAGGGTGCGGTGGATGCTATGAGTCTGGAT
GCCCAGGTTGATCGGTTTCTGCAAAGTGTTGGTAGTAATGAATGTGGTAA
TCTTGGGGTCATGGATACGGTGATGGAGAGCATTGAGGAGTCGTGA
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Coding sequence (CDS) from alignment at NKJJ01000008.1:421745..423290+

>CAN33_28855-T1 ID=CAN33_28855-T1|Name=CAN33_28855-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2442bp|location=Sequence derived from alignment at NKJJ01000008.1:421745..423290+ (Aspergillus niger FDAARGOS_311)
ATGCCTTGCACGCCCAGCCCCTTCAAAGCCCCAGTGCCCAACACCAACCC
GGCTCTGGAAGCCGTGGCAGAGAAGCTTCGCGCCAGCGGCAGCAGAAGAC
TCCTCACCCCAGAAGGCATCGGGGCGCTCTCCACCTCGACGAAGAACATC
ATCGACAATCTATATATCAATGTCCGAAAGAACTGCTGGGCAGACGCCAT
CTGCGAAACCCCAGCAGGCCTCCGCTCTGGTCGAATGGACCCCACAGGTA
GATGGCACCTTCGTAACCCTCACGTCGCCGCCTTCATCGACGACCTCTCC
CACGCCATCCAACTCGGCGATATCTCCGACGTCGACTACTACCTGTCCCG
CAGAATCGCCCTCAACACCTGCGACCGCGAGGGCAACTCCCTGCTCCACC
TAGCACTAGTCTCCGGCCACTTGGACATCGCCCGTCTCCTCCTCGACAGA
GGCGCCAGCCCCCTATACAGCTTTGACCCGGAAGTCCCTGAGCTCGACCA
ACTCTTCCAATGCCCCAGCCGCGTTGCGCCCCAGCTCAGTTCCATCCGCG
TCGACATCCTCCGTCTGCTGCTCAGATACGGCGCCCCTATCCGCCGCTTC
CCCACCCTCAACGTCCTCTTCGACTCCCCCGGATACGCCAACGAACTCCT
CGGTCTGCTCCTCGATAGACATCCGGATATCCTCCACGAACGCTCCAAGT
CAGGCCACACCATCCTCCACTCCGCCGCTGCGCTCGGCACGCCCGAGGCA
TGCGAGTTGCTGCTTACTCGCGCGCCGCACCTCCGCACCACATATACAGA
TTGGGATGTGACGCCGCTGCACATGGCCATTCTGGAGAAAAATGAGCTGA
CAGCCTGCTTCCTCATCTCGGCAGATATGACCCTGCAGATGCGCCACGGG
TACGACCGCACCGAGCTGTTCCTGGCGGCATGTATGGGCCTGCGCCGCGT
CGTGAAGTTGTTGTTGTCTTCTACGGCGTTCTTTGCGTACCCGCCGCAGA
AGTGGGTTTCCGATGCGAAGGCTGCTGTCCGTGTGGCGCTGTATATGGGG
AATACGGAGGTGGTGGATATGATTAGACGGAATTTGGGATTCGACGAGGG
TGCGGTGGATGCTATGAGTCTGGATGCCCAGGTTGATCGGTTTCTGCAAA
GTGTTGGTAGTAATGAATGTGGTAATCTTGGGGTCATGGATACGGTGATG
GAGAGCATTGAGGAGTCGTGAATGCCTTGCACGCCCAGCCCCTTCAAAGC
CCCAGTGCCCAACACCAACCCGGCTCTGGAAGCCGTGGCAGAGAAGCTTC
GCGCCAGCGGCAGCAGAAGACTCCTCACCCCAGAAGGCATCGGGGCGCTC
TCCACCTCGACGAAGAACATCATCGACAATCTATATATCAATGTCCGAAA
GAACTGCTGGGCAGACGCCATCTGCGAAACCCCAGCAGGCCTCCGCTCTG
GTCGAATGGACCCCACAGGTAGATGGCACCTTCGTAACCCTCACGTCGCC
GCCTTCATCGACGACCTCTCCCACGCCATCCAACTCGGCGATATCTCCGA
CGTCGACTACTACCTGTCCCGCAGAATCGCCCTCAACACCTGCGACCGCG
AGGGCAACTCCCTGCTCCACCTAGCACTAGTCTCCGGCCACTTGGACATC
GCCCGTCTCCTCCTCGACAGAGGCGCCAGCCCCCTATACAGCTTTGACCC
GGAAGTCCCTGAGCTCGACCAACTCTTCCAATGCCCCAGCCGCGTTGCGC
CCCAGCTCAGTTCCATCCGCGTCGACATCCTCCGTCTGCTGCTCAGATAC
GGCGCCCCTATCCGCCGCTTCCCCACCCTCAACGTCCTCTTCGACTCCCC
CGGATACGCCAACGAACTCCTCGGTCTGCTCCTCGATAGACATCCGGATA
TCCTCCACGAACGCTCCAAGTCAGGCCACACCATCCTCCACTCCGCCGCT
GCGCTCGGCACGCCCGAGGCATGCGAGTTGCTGCTTACTCGCGCGCCGCA
CCTCCGCACCACATATACAGATTGGGATGTGACGCCGCTGCACATGGCCA
TTCTGGAGAAAAATGAGCTGACAGCCTGCTTCCTCATCTCGGCAGATATG
ACCCTGCAGATGCGCCACGGGTACGACCGCACCGAGCTGTTCCTGGCGGC
ATGTATGGGCCTGCGCCGCGTCGTGAAGTTGTTGTTGTCTTCTACGGCGT
TCTTTGCGTACCCGCCGCAGAAGTGGGTTTCCGATGCGAAGGCTGCTGTC
CGTGTGGCGCTGTATATGGGGAATACGGAGGTGGTGGATATGATTAGACG
GAATTTGGGATTCGACGAGGGTGCGGTGGATGCTATGAGTCTGGATGCCC
AGGTTGATCGGTTTCTGCAAAGTGTTGGTAGTAATGAATGTGGTAATCTT
GGGGTCATGGATACGGTGATGGAGAGCATTGAGGAGTCGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_28855CAN33_28855Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_28855-T1.exon1CAN33_28855-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_28855-T1.exon2CAN33_28855-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_28855-T1.cdsCAN33_28855-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_28855-T1CAN33_28855-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13606
DBxrefPFAM:PF12796
DBxrefPFAM:PF00023
ProductAnkyrin repeats (3 copies) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000008.1supercontigNKJJ01000008.1:421745..423290 +
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