|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000008.1:421745..423290+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_28855-T1 ID=CAN33_28855-T1|Name=CAN33_28855-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1546bp|location=Sequence derived from alignment at NKJJ01000008.1:421745..423290+ (Aspergillus niger FDAARGOS_311)
ATGCCTTGCACGCCCAGCCCCTTCAAAGCCCCAGTGCCCAACACCAACCC
GGCTCTGGAAGCCGTGGCAGAGAAGCTTCGCGCCAGCGGCAGCAGAAGAC
TCCTCACCCCAGAAGGCATCGGGGCGCTCTCCACCTCGACGAAGAACATC
ATCGACAATCTATATATCAATGTCCGAAAGAACTGCTGGGCAGACGCCAT
CTGCGAAACCCCAGCAGGCCTCCGCTCTGGTCGAATGGACCCCACAGGTA
GATGGCACCTTCGTAACCCTCACGTCGCCGCCTTCATCGACGACCTCTCC
CACGCCATCCAACTCGGCGATATCTCCGACGTCGACTACTACCTGTCCCG
CAGAATCGCCCTCAACACCTGCGACCGCGAGGGCAACTCCCTGCTCCACC
TAGCACTAGTCTCCGGCCACTTGGACATCGCCCGTCTCCTCCTCGACAGA
GGCGCCAGCCCCCTATACAGCTTTGACCCGGAAGTCCCTGAGCTCGACCA
ACTCTTCCAATGCCCCAGCCGCGTTGCGCCCCAGCTCAGTTCCATCCGCG
TCGACATCCTCCGTCTGCTGCTCAGATACGGCGCCCCTATCCGCCGCTTC
CCCACCCTCAACGTCCTCTTCGACTCCCCCGGATACGCCAACGAACTCCT
CGGTCTGCTCCTCGATAGACATCCGGATATCCTCCACGAACGCTCCAAGT
CAGGCCACACCATCCTCCACTCCGCCGCTGCGCTCGGCACGCCCGAGGCA
TGCGAGTTGCTGCTTACTCGCGCGCCGCACCTCCGCACCACATATACAGA
TTGGGATGTGACGCCGCTGCACATGGCCATTCTGGAGAAAAATGAGCTGA
CAGCCTGCTTCCTCATCTCGGCAGATATGACCCTGCAGATGCGCCACGGG
TACGACCGCACCGAGCTGTTCCTGGCGGCATGTATGGGCCTGCGCCGCGT
CGTGAAGTTGTTGTTGTCTTCTACGGCGTTCTTTGCGTACCCGCCGCAGA
AGTGGGTTTCCGATGCGAAGGCTGCTGTCCGTGTGGCGCTGTATATGGGG
AATACGGAGGTGGTGGATATGATTAGACGGAATTTGGGATTGTATGTGTT
ACCTTTTCACCCCCTTCATGGAAACTTATAAGTAATATTGACTGATATAT
GTTGTGTGTAGATCATGGCACTCCTGTCTATCTCAGTTTCTTACCCGACC
CCGGCCTGTCCTGACCTCTACTAGCATTCGGGGGATTGAGACTAGGAGAT
CGAGGAGTAGACGGGCTAGGAGTGTGAGGGGTGATACTACTAATCAACAG
TGTTCTGTTGAGGCTGGGAGTTCGGCTGCGTCGCTGAGTGGGAATGTGAA
TGTGCCTGCTCCTTCTCATCCGCTCGCTACTGTAACCAATCCGGGGACTG
ATAATCTTATGGACAGCGACGAGGGTGCGGTGGATGCTATGAGTCTGGAT
GCCCAGGTTGATCGGTTTCTGCAAAGTGTTGGTAGTAATGAATGTGGTAA
TCTTGGGGTCATGGATACGGTGATGGAGAGCATTGAGGAGTCGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000008.1:421745..423290+ >CAN33_28855-T1 ID=CAN33_28855-T1|Name=CAN33_28855-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2442bp|location=Sequence derived from alignment at NKJJ01000008.1:421745..423290+ (Aspergillus niger FDAARGOS_311)
ATGCCTTGCACGCCCAGCCCCTTCAAAGCCCCAGTGCCCAACACCAACCC
GGCTCTGGAAGCCGTGGCAGAGAAGCTTCGCGCCAGCGGCAGCAGAAGAC
TCCTCACCCCAGAAGGCATCGGGGCGCTCTCCACCTCGACGAAGAACATC
ATCGACAATCTATATATCAATGTCCGAAAGAACTGCTGGGCAGACGCCAT
CTGCGAAACCCCAGCAGGCCTCCGCTCTGGTCGAATGGACCCCACAGGTA
GATGGCACCTTCGTAACCCTCACGTCGCCGCCTTCATCGACGACCTCTCC
CACGCCATCCAACTCGGCGATATCTCCGACGTCGACTACTACCTGTCCCG
CAGAATCGCCCTCAACACCTGCGACCGCGAGGGCAACTCCCTGCTCCACC
TAGCACTAGTCTCCGGCCACTTGGACATCGCCCGTCTCCTCCTCGACAGA
GGCGCCAGCCCCCTATACAGCTTTGACCCGGAAGTCCCTGAGCTCGACCA
ACTCTTCCAATGCCCCAGCCGCGTTGCGCCCCAGCTCAGTTCCATCCGCG
TCGACATCCTCCGTCTGCTGCTCAGATACGGCGCCCCTATCCGCCGCTTC
CCCACCCTCAACGTCCTCTTCGACTCCCCCGGATACGCCAACGAACTCCT
CGGTCTGCTCCTCGATAGACATCCGGATATCCTCCACGAACGCTCCAAGT
CAGGCCACACCATCCTCCACTCCGCCGCTGCGCTCGGCACGCCCGAGGCA
TGCGAGTTGCTGCTTACTCGCGCGCCGCACCTCCGCACCACATATACAGA
TTGGGATGTGACGCCGCTGCACATGGCCATTCTGGAGAAAAATGAGCTGA
CAGCCTGCTTCCTCATCTCGGCAGATATGACCCTGCAGATGCGCCACGGG
TACGACCGCACCGAGCTGTTCCTGGCGGCATGTATGGGCCTGCGCCGCGT
CGTGAAGTTGTTGTTGTCTTCTACGGCGTTCTTTGCGTACCCGCCGCAGA
AGTGGGTTTCCGATGCGAAGGCTGCTGTCCGTGTGGCGCTGTATATGGGG
AATACGGAGGTGGTGGATATGATTAGACGGAATTTGGGATTCGACGAGGG
TGCGGTGGATGCTATGAGTCTGGATGCCCAGGTTGATCGGTTTCTGCAAA
GTGTTGGTAGTAATGAATGTGGTAATCTTGGGGTCATGGATACGGTGATG
GAGAGCATTGAGGAGTCGTGAATGCCTTGCACGCCCAGCCCCTTCAAAGC
CCCAGTGCCCAACACCAACCCGGCTCTGGAAGCCGTGGCAGAGAAGCTTC
GCGCCAGCGGCAGCAGAAGACTCCTCACCCCAGAAGGCATCGGGGCGCTC
TCCACCTCGACGAAGAACATCATCGACAATCTATATATCAATGTCCGAAA
GAACTGCTGGGCAGACGCCATCTGCGAAACCCCAGCAGGCCTCCGCTCTG
GTCGAATGGACCCCACAGGTAGATGGCACCTTCGTAACCCTCACGTCGCC
GCCTTCATCGACGACCTCTCCCACGCCATCCAACTCGGCGATATCTCCGA
CGTCGACTACTACCTGTCCCGCAGAATCGCCCTCAACACCTGCGACCGCG
AGGGCAACTCCCTGCTCCACCTAGCACTAGTCTCCGGCCACTTGGACATC
GCCCGTCTCCTCCTCGACAGAGGCGCCAGCCCCCTATACAGCTTTGACCC
GGAAGTCCCTGAGCTCGACCAACTCTTCCAATGCCCCAGCCGCGTTGCGC
CCCAGCTCAGTTCCATCCGCGTCGACATCCTCCGTCTGCTGCTCAGATAC
GGCGCCCCTATCCGCCGCTTCCCCACCCTCAACGTCCTCTTCGACTCCCC
CGGATACGCCAACGAACTCCTCGGTCTGCTCCTCGATAGACATCCGGATA
TCCTCCACGAACGCTCCAAGTCAGGCCACACCATCCTCCACTCCGCCGCT
GCGCTCGGCACGCCCGAGGCATGCGAGTTGCTGCTTACTCGCGCGCCGCA
CCTCCGCACCACATATACAGATTGGGATGTGACGCCGCTGCACATGGCCA
TTCTGGAGAAAAATGAGCTGACAGCCTGCTTCCTCATCTCGGCAGATATG
ACCCTGCAGATGCGCCACGGGTACGACCGCACCGAGCTGTTCCTGGCGGC
ATGTATGGGCCTGCGCCGCGTCGTGAAGTTGTTGTTGTCTTCTACGGCGT
TCTTTGCGTACCCGCCGCAGAAGTGGGTTTCCGATGCGAAGGCTGCTGTC
CGTGTGGCGCTGTATATGGGGAATACGGAGGTGGTGGATATGATTAGACG
GAATTTGGGATTCGACGAGGGTGCGGTGGATGCTATGAGTCTGGATGCCC
AGGTTGATCGGTTTCTGCAAAGTGTTGGTAGTAATGAATGTGGTAATCTT
GGGGTCATGGATACGGTGATGGAGAGCATTGAGGAGTCGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR020683 |
| DBxref | InterPro:IPR036770 |
| DBxref | InterPro:IPR002110 |
| DBxref | PFAM:PF13606 |
| DBxref | PFAM:PF12796 |
| DBxref | PFAM:PF00023 |
| Product | Ankyrin repeats (3 copies) family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000008.1 | supercontig | NKJJ01000008.1:421745..423290 + |
|
