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CAN33_29130-T1, CAN33_29130-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_29130-T1
Unique NameCAN33_29130-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000008.1:578438..579869+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_29130-T1 ID=CAN33_29130-T1|Name=CAN33_29130-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1432bp|location=Sequence derived from alignment at NKJJ01000008.1:578438..579869+ (Aspergillus niger FDAARGOS_311)
ATGAATGGCTTCGCATCGCACGGCCTCGACGAGGATGCATTCGGGGAAAA
GTCTGGGCTGCAGGGCGGCCTGAAGACATTTGATGCTTTTCGTATGTTGT
GCTCCGTATTTTATGGATTCATTTGATGTCCACAACCCTACATTTACTAT
GGTCCAAGCCTTGTGGTAAACAGCCGCGCATGGATATACTGCCAGTCCAT
TCCAGCTACACCCCGAACTAACATCGCACTGTTCACCCAGCCAAGACAAA
ACCCTCATATACTGCCCCATCCCGCCGTGGAGGACAATGGACCGTCCTCA
TTCTCGTCATCTGCACGGTCTTCACCTTCTCAGAGTTCCGCACCTGGCTC
CACGGCTCCGAGAACCACCACTTCAGCGTCGAAAAGGGTGTCGGCCATGA
CCTGCAACTGAACCTTGATCTCGTTGTTCGCATGCCCTGCGACACCCTCG
ACGTCAACATTCAAGATGCCTCCGGCGACCGCATTCTCGCCGGCGACCTG
CTCCAACGCGAACGCACCAGCTGGAAGCTCTGGATGGACAAGCGCAACCG
CGAAACCTCCGGCGGCGTCCACGAATACCAAACCCTCAGCCAAGAAGACA
CGGACCGGATTTCTGCGCGCGAAGCCGATGCACATGTCCACCATGTCCTC
GGCGAAGTGAGGAAGAACCCGCGCCGGAAGTTTGCCAAGGGACCCAGACT
GAGGCGCGGCGATACAGTCGACTCATGTCGCATCTACGGCAGCTTGGAGG
GCAACAAGGTCCAAGGTGACTTCCACATTACGGCTCGTGGGCATGGATAT
AGGAACTTTGGAGAACATTTGGACCATGGAGGTACGTTGTCACCCTTTCA
GTCTCCCGCCCACAGAGTCCAGAAACAAGCGCAGTCAACTAAAACTAACA
TAATCCATCACCAGTCTTCAACTTCTCCCACATGGTCACCGAACTCTCCT
TCGGCCCCCACTACCCTACTCTCCTCAACCCGCTCGATAAAACCATCGCC
ACCACTGAAACCCACTACTACAAGTACCAATACTTCCTCTCCGTCGTCCC
CACCCTCTACTCTAAGGGTGCCAGCGCCCTCGATACCTACACCAACCACC
CGGATCTCATCGCTACCAACCGGAACAGGAACCTCGTCTTCACGAACCAA
TACGCTGCCACCACCCAAGCCACCGAGCTGCCTGAGAACCCTTACTTCAT
CCCCGGTATCTTCTTCAAGTATAACATCGAGCCGATCCTGTTGATGATCA
GCGAGGAGCGGACGAGCTTCCTCTCGCTGCTGATCAGACTCGTCAATACC
GTCTCGGGCGTCATGGTCACGGGCGGTTGGGTGTATCAGATCTCCGGGTG
GGTTGGAGAACTGGTGAACCGGAAACGCGGCAGAGGGAAGTCGGAGGGTG
TGCTTACGGGGAAGCACTATGCGGAGGATTAG
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Coding sequence (CDS) from alignment at NKJJ01000008.1:578438..579869+

>CAN33_29130-T1 ID=CAN33_29130-T1|Name=CAN33_29130-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3600bp|location=Sequence derived from alignment at NKJJ01000008.1:578438..579869+ (Aspergillus niger FDAARGOS_311)
ATGAATGGCTTCGCATCGCACGGCCTCGACGAGGATGCATTCGGGGAAAA
GTCTGGGCTGCAGGGCGGCCTGAAGACATTTGATGCTTTTCCCAAGACAA
AACCCTCATATACTGCCCCATCCCGCCGTGGAGGACAATGGACCGTCCTC
ATTCTCGTCATCTGCACGGTCTTCACCTTCTCAGAGTTCCGCACCTGGCT
CCACGGCTCCGAGAACCACCACTTCAGCGTCGAAAAGGGTGTCGGCCATG
ACCTGCAACTGAACCTTGATCTCGTTGTTCGCATGCCCTGCGACACCCTC
GACGTCAACATTCAAGATGCCTCCGGCGACCGCATTCTCGCCGGCGACCT
GCTCCAACGCGAACGCACCAGCTGGAAGCTCTGGATGGACAAGCGCAACC
GCGAAACCTCCGGCGGCGTCCACGAATACCAAACCCTCAGCCAAGAAGAC
ACGGACCGGATTTCTGCGCGCGAAGCCGATGCACATGTCCACCATGTCCT
CGGCGAAGTGAGGAAGAACCCGCGCCGGAAGTTTGCCAAGGGACCCAGAC
TGAGGCGCGGCGATACAGTCGACTCATGTCGCATCTACGGCAGCTTGGAG
GGCAACAAGGTCCAAGGTGACTTCCACATTACGGCTCGTGGGCATGGATA
TAGGAACTTTGGAGAACATTTGGACCATGGAGTCTTCAACTTCTCCCACA
TGGTCACCGAACTCTCCTTCGGCCCCCACTACCCTACTCTCCTCAACCCG
CTCGATAAAACCATCGCCACCACTGAAACCCACTACTACAAGTACCAATA
CTTCCTCTCCGTCGTCCCCACCCTCTACTCTAAGGGTGCCAGCGCCCTCG
ATACCTACACCAACCACCCGGATCTCATCGCTACCAACCGGAACAGGAAC
CTCGTCTTCACGAACCAATACGCTGCCACCACCCAAGCCACCGAGCTGCC
TGAGAACCCTTACTTCATCCCCGGTATCTTCTTCAAGTATAACATCGAGC
CGATCCTGTTGATGATCAGCGAGGAGCGGACGAGCTTCCTCTCGCTGCTG
ATCAGACTCGTCAATACCGTCTCGGGCGTCATGGTCACGGGCGGTTGGGT
GTATCAGATCTCCGGGTGGGTTGGAGAACTGGTGAACCGGAAACGCGGCA
GAGGGAAGTCGGAGGGTGTGCTTACGGGGAAGCACTATGCGGAGGATTAG
ATGAATGGCTTCGCATCGCACGGCCTCGACGAGGATGCATTCGGGGAAAA
GTCTGGGCTGCAGGGCGGCCTGAAGACATTTGATGCTTTTCCCAAGACAA
AACCCTCATATACTGCCCCATCCCGCCGTGGAGGACAATGGACCGTCCTC
ATTCTCGTCATCTGCACGGTCTTCACCTTCTCAGAGTTCCGCACCTGGCT
CCACGGCTCCGAGAACCACCACTTCAGCGTCGAAAAGGGTGTCGGCCATG
ACCTGCAACTGAACCTTGATCTCGTTGTTCGCATGCCCTGCGACACCCTC
GACGTCAACATTCAAGATGCCTCCGGCGACCGCATTCTCGCCGGCGACCT
GCTCCAACGCGAACGCACCAGCTGGAAGCTCTGGATGGACAAGCGCAACC
GCGAAACCTCCGGCGGCGTCCACGAATACCAAACCCTCAGCCAAGAAGAC
ACGGACCGGATTTCTGCGCGCGAAGCCGATGCACATGTCCACCATGTCCT
CGGCGAAGTGAGGAAGAACCCGCGCCGGAAGTTTGCCAAGGGACCCAGAC
TGAGGCGCGGCGATACAGTCGACTCATGTCGCATCTACGGCAGCTTGGAG
GGCAACAAGGTCCAAGGTGACTTCCACATTACGGCTCGTGGGCATGGATA
TAGGAACTTTGGAGAACATTTGGACCATGGAGTCTTCAACTTCTCCCACA
TGGTCACCGAACTCTCCTTCGGCCCCCACTACCCTACTCTCCTCAACCCG
CTCGATAAAACCATCGCCACCACTGAAACCCACTACTACAAGTACCAATA
CTTCCTCTCCGTCGTCCCCACCCTCTACTCTAAGGGTGCCAGCGCCCTCG
ATACCTACACCAACCACCCGGATCTCATCGCTACCAACCGGAACAGGAAC
CTCGTCTTCACGAACCAATACGCTGCCACCACCCAAGCCACCGAGCTGCC
TGAGAACCCTTACTTCATCCCCGGTATCTTCTTCAAGTATAACATCGAGC
CGATCCTGTTGATGATCAGCGAGGAGCGGACGAGCTTCCTCTCGCTGCTG
ATCAGACTCGTCAATACCGTCTCGGGCGTCATGGTCACGGGCGGTTGGGT
GTATCAGATCTCCGGGTGGGTTGGAGAACTGGTGAACCGGAAACGCGGCA
GAGGGAAGTCGGAGGGTGTGCTTACGGGGAAGCACTATGCGGAGGATTAG
ATGAATGGCTTCGCATCGCACGGCCTCGACGAGGATGCATTCGGGGAAAA
GTCTGGGCTGCAGGGCGGCCTGAAGACATTTGATGCTTTTCCCAAGACAA
AACCCTCATATACTGCCCCATCCCGCCGTGGAGGACAATGGACCGTCCTC
ATTCTCGTCATCTGCACGGTCTTCACCTTCTCAGAGTTCCGCACCTGGCT
CCACGGCTCCGAGAACCACCACTTCAGCGTCGAAAAGGGTGTCGGCCATG
ACCTGCAACTGAACCTTGATCTCGTTGTTCGCATGCCCTGCGACACCCTC
GACGTCAACATTCAAGATGCCTCCGGCGACCGCATTCTCGCCGGCGACCT
GCTCCAACGCGAACGCACCAGCTGGAAGCTCTGGATGGACAAGCGCAACC
GCGAAACCTCCGGCGGCGTCCACGAATACCAAACCCTCAGCCAAGAAGAC
ACGGACCGGATTTCTGCGCGCGAAGCCGATGCACATGTCCACCATGTCCT
CGGCGAAGTGAGGAAGAACCCGCGCCGGAAGTTTGCCAAGGGACCCAGAC
TGAGGCGCGGCGATACAGTCGACTCATGTCGCATCTACGGCAGCTTGGAG
GGCAACAAGGTCCAAGGTGACTTCCACATTACGGCTCGTGGGCATGGATA
TAGGAACTTTGGAGAACATTTGGACCATGGAGTCTTCAACTTCTCCCACA
TGGTCACCGAACTCTCCTTCGGCCCCCACTACCCTACTCTCCTCAACCCG
CTCGATAAAACCATCGCCACCACTGAAACCCACTACTACAAGTACCAATA
CTTCCTCTCCGTCGTCCCCACCCTCTACTCTAAGGGTGCCAGCGCCCTCG
ATACCTACACCAACCACCCGGATCTCATCGCTACCAACCGGAACAGGAAC
CTCGTCTTCACGAACCAATACGCTGCCACCACCCAAGCCACCGAGCTGCC
TGAGAACCCTTACTTCATCCCCGGTATCTTCTTCAAGTATAACATCGAGC
CGATCCTGTTGATGATCAGCGAGGAGCGGACGAGCTTCCTCTCGCTGCTG
ATCAGACTCGTCAATACCGTCTCGGGCGTCATGGTCACGGGCGGTTGGGT
GTATCAGATCTCCGGGTGGGTTGGAGAACTGGTGAACCGGAAACGCGGCA
GAGGGAAGTCGGAGGGTGTGCTTACGGGGAAGCACTATGCGGAGGATTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_29130CAN33_29130Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29130-T1.exon1CAN33_29130-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_29130-T1.exon2CAN33_29130-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_29130-T1.exon3CAN33_29130-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29130-T1.cdsCAN33_29130-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29130-T1CAN33_29130-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092640BS
DBxrefInterPro:IPR039542
DBxrefInterPro:IPR012936
DBxrefPFAM:PF13850
DBxrefPFAM:PF07970
ProductEndoplasmic reticulum vesicle transporter family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000008.1supercontigNKJJ01000008.1:578438..579869 +
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