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CAN33_29315-T1, CAN33_29315-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_29315-T1
Unique NameCAN33_29315-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000008.1:693551..695463+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_29315-T1 ID=CAN33_29315-T1|Name=CAN33_29315-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1913bp|location=Sequence derived from alignment at NKJJ01000008.1:693551..695463+ (Aspergillus niger FDAARGOS_311)
ATGCCTTTTCTGCGGTGGCCTCCAGGCCAGAAAATCATGATCACACCTAC
CACTCCTTTCCGAGCTGCCAGAACTCTGGCATTCGGTGGACGGATACTAT
CGCCCAAAAAGTCATCCTCGTTCGTATACCCTACAGTTGATACAAACTCC
CATGATGCTAATGGTAAATCTAAACGTGTCAATATAGTCGTCTTCTCTCC
TCAACTGCACATAGTTATGCCGACGAAACACTGAACAAAGTCTCCTCTAA
GATCACACAACCCAAGTCCCAGGGTGCATCTCAAGCGATGCTTTACGCGA
CCGGCTTGACGGAGAAAGACATGTCCAAGGCACAGGTTGGTATTTCATCA
GTGTGGTTCGAAGGGAATCCTTGTAACATGCACTTGATGGATTTGTCGTC
GCTGGTTCGCGAGTCGGTAGCCAAAGCTGGCCTGGTTCCCATGCGCTTCA
ACTCCATCGGCGCCTCTGATGGCATTAGTATGGGCACATCTGGCATGCGA
TTCAGTTTACAGAGCCGAGAGATCATTGCTGATGGAATTGAAACGGTCAT
GAATGCCCAGTGGTATGATGCTAATATCTCGTTGCCTGGCTGTGATAAGA
ACATGCCAGGTGTGCTGATGGCTATGGGTCGGGTCAACCGTCCGAGTATC
ATGGTGTATGGTGGTAGTATCAAGCCCGGCTGCAGTGCGGGGGGTAAGCC
ACTTGACTTGGTCAGCGCCTTTCAATCGTATGGCCAATATCTCACTGGTG
AGATCGACGAGAAGGAACGATTTGATATTATCCGACACGCTTGCCCAGGT
GCTGGTGCCTGTGGGGGTATGTATACGGCTAATACACTGGCAACGGCCAT
CGAGACCCTCGGAATGACGGTCCCTGGAAGCAGCAGTACACCGGCAGAGG
ATCCGAGGAAGCTGGCAGAGTGTGAGGACATCGGTCAGACGGTGAAGAAT
CTGCTGAAGGAGGACATCCGTCCCAAGGATATCATGACACGGCAGGCATT
TGAAAATGCTATGATTGTTGTGAATATCCTTGGAGGCAGCACCAATGCAG
TACTGCACTTGATTGCTATCGCTGATTCCGTTGGGATCAAATTGACTATC
GATGACTTCCAGGCTGTGTCAGACAAGACACCTTTCTTAGCTGATCTAAA
GCCTTCCGGCAAGTATGTCATGCATGACCTGCACAAAGTCGGGGGCACGC
CTGCCCTGCTGAAGTTCCTGCTCAGGGAAGGCCTTATTGACGGCTCCGGC
GTCACTGTCACTGGCAAAACCATGAAAGAGAATGTAGCCTCATGGCCCGA
ATTTTCACCTGAGCAGCCCATCATCCGCCCTCTAAGCAATCCCATCAAGC
CAACCGGCCACTTGCAGATCCTTCGTGGGTCATTGGCCCCTGGCGGTTCG
GTTGGAAAAATCACCGGCAAAGAAGGTTTACGGTTCGAAGGTCTTGCTAA
ATGTTACGACTTTGAGGACGCTTTCATCGAGGCTCTCGAACGAGGCGAGA
TCAAGAAGGGCGAGAAAACGGTCGTTATTATTCGATATGAAGGGCCCAAA
GGCGGCCCCGGGATGCCTGAGATGCTCAAGCCCAGCTCAGCTATCATGGG
CGCCGGATTGGGTCAGGATGTTGCGCTACTCACTGATGGAAGATTCTCTG
GAGGTAGTCATGGCTTTTTAATTGGGCATGTTGTGCCTGAGGCTATGGAG
GGCGGGCCCATTGCCCTGGTGAAGGATGGCGATCGAATCGTAATTGATGC
GGAGCAAAGAGTGGTCGACCTGCTGATCACCCCAGAAGAAATGGCAAAGA
GAAGAGTGTCTTGGACAGCACCGGCACCTCGGGCGAAGAAGGGGACATTA
AGCAAGTATGCGAAGCTGGTGAGCGATGCGAGCCATGGGTGCGTGACGGA
TGGTCCAATATAG
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Coding sequence (CDS) from alignment at NKJJ01000008.1:693551..695463+

>CAN33_29315-T1 ID=CAN33_29315-T1|Name=CAN33_29315-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3690bp|location=Sequence derived from alignment at NKJJ01000008.1:693551..695463+ (Aspergillus niger FDAARGOS_311)
ATGCCTTTTCTGCGGTGGCCTCCAGGCCAGAAAATCATGATCACACCTAC
CACTCCTTTCCGAGCTGCCAGAACTCTGGCATTCGGTGGACGGATACTAT
CGCCCAAAAAGTCATCCTCTCGTCTTCTCTCCTCAACTGCACATAGTTAT
GCCGACGAAACACTGAACAAAGTCTCCTCTAAGATCACACAACCCAAGTC
CCAGGGTGCATCTCAAGCGATGCTTTACGCGACCGGCTTGACGGAGAAAG
ACATGTCCAAGGCACAGGTTGGTATTTCATCAGTGTGGTTCGAAGGGAAT
CCTTGTAACATGCACTTGATGGATTTGTCGTCGCTGGTTCGCGAGTCGGT
AGCCAAAGCTGGCCTGGTTCCCATGCGCTTCAACTCCATCGGCGCCTCTG
ATGGCATTAGTATGGGCACATCTGGCATGCGATTCAGTTTACAGAGCCGA
GAGATCATTGCTGATGGAATTGAAACGGTCATGAATGCCCAGTGGTATGA
TGCTAATATCTCGTTGCCTGGCTGTGATAAGAACATGCCAGGTGTGCTGA
TGGCTATGGGTCGGGTCAACCGTCCGAGTATCATGGTGTATGGTGGTAGT
ATCAAGCCCGGCTGCAGTGCGGGGGGTAAGCCACTTGACTTGGTCAGCGC
CTTTCAATCGTATGGCCAATATCTCACTGGTGAGATCGACGAGAAGGAAC
GATTTGATATTATCCGACACGCTTGCCCAGGTGCTGGTGCCTGTGGGGGT
ATGTATACGGCTAATACACTGGCAACGGCCATCGAGACCCTCGGAATGAC
GGTCCCTGGAAGCAGCAGTACACCGGCAGAGGATCCGAGGAAGCTGGCAG
AGTGTGAGGACATCGGTCAGACGGTGAAGAATCTGCTGAAGGAGGACATC
CGTCCCAAGGATATCATGACACGGCAGGCATTTGAAAATGCTATGATTGT
TGTGAATATCCTTGGAGGCAGCACCAATGCAGTACTGCACTTGATTGCTA
TCGCTGATTCCGTTGGGATCAAATTGACTATCGATGACTTCCAGGCTGTG
TCAGACAAGACACCTTTCTTAGCTGATCTAAAGCCTTCCGGCAAGTATGT
CATGCATGACCTGCACAAAGTCGGGGGCACGCCTGCCCTGCTGAAGTTCC
TGCTCAGGGAAGGCCTTATTGACGGCTCCGGCGTCACTGTCACTGGCAAA
ACCATGAAAGAGAATGTAGCCTCATGGCCCGAATTTTCACCTGAGCAGCC
CATCATCCGCCCTCTAAGCAATCCCATCAAGCCAACCGGCCACTTGCAGA
TCCTTCGTGGGTCATTGGCCCCTGGCGGTTCGGTTGGAAAAATCACCGGC
AAAGAAGGTTTACGGTTCGAAGGTCTTGCTAAATGTTACGACTTTGAGGA
CGCTTTCATCGAGGCTCTCGAACGAGGCGAGATCAAGAAGGGCGAGAAAA
CGGTCGTTATTATTCGATATGAAGGGCCCAAAGGCGGCCCCGGGATGCCT
GAGATGCTCAAGCCCAGCTCAGCTATCATGGGCGCCGGATTGGGTCAGGA
TGTTGCGCTACTCACTGATGGAAGATTCTCTGGAGGTAGTCATGGCTTTT
TAATTGGGCATGTTGTGCCTGAGGCTATGGAGGGCGGGCCCATTGCCCTG
GTGAAGGATGGCGATCGAATCGTAATTGATGCGGAGCAAAGAGTGGTCGA
CCTGCTGATCACCCCAGAAGAAATGGCAAAGAGAAGAGTGTCTTGGACAG
CACCGGCACCTCGGGCGAAGAAGGGGACATTAAGCAAGTATGCGAAGCTG
GTGAGCGATGCGAGCCATGGGTGCGTGACGGATGGTCCAATATAGATGCC
TTTTCTGCGGTGGCCTCCAGGCCAGAAAATCATGATCACACCTACCACTC
CTTTCCGAGCTGCCAGAACTCTGGCATTCGGTGGACGGATACTATCGCCC
AAAAAGTCATCCTCTCGTCTTCTCTCCTCAACTGCACATAGTTATGCCGA
CGAAACACTGAACAAAGTCTCCTCTAAGATCACACAACCCAAGTCCCAGG
GTGCATCTCAAGCGATGCTTTACGCGACCGGCTTGACGGAGAAAGACATG
TCCAAGGCACAGGTTGGTATTTCATCAGTGTGGTTCGAAGGGAATCCTTG
TAACATGCACTTGATGGATTTGTCGTCGCTGGTTCGCGAGTCGGTAGCCA
AAGCTGGCCTGGTTCCCATGCGCTTCAACTCCATCGGCGCCTCTGATGGC
ATTAGTATGGGCACATCTGGCATGCGATTCAGTTTACAGAGCCGAGAGAT
CATTGCTGATGGAATTGAAACGGTCATGAATGCCCAGTGGTATGATGCTA
ATATCTCGTTGCCTGGCTGTGATAAGAACATGCCAGGTGTGCTGATGGCT
ATGGGTCGGGTCAACCGTCCGAGTATCATGGTGTATGGTGGTAGTATCAA
GCCCGGCTGCAGTGCGGGGGGTAAGCCACTTGACTTGGTCAGCGCCTTTC
AATCGTATGGCCAATATCTCACTGGTGAGATCGACGAGAAGGAACGATTT
GATATTATCCGACACGCTTGCCCAGGTGCTGGTGCCTGTGGGGGTATGTA
TACGGCTAATACACTGGCAACGGCCATCGAGACCCTCGGAATGACGGTCC
CTGGAAGCAGCAGTACACCGGCAGAGGATCCGAGGAAGCTGGCAGAGTGT
GAGGACATCGGTCAGACGGTGAAGAATCTGCTGAAGGAGGACATCCGTCC
CAAGGATATCATGACACGGCAGGCATTTGAAAATGCTATGATTGTTGTGA
ATATCCTTGGAGGCAGCACCAATGCAGTACTGCACTTGATTGCTATCGCT
GATTCCGTTGGGATCAAATTGACTATCGATGACTTCCAGGCTGTGTCAGA
CAAGACACCTTTCTTAGCTGATCTAAAGCCTTCCGGCAAGTATGTCATGC
ATGACCTGCACAAAGTCGGGGGCACGCCTGCCCTGCTGAAGTTCCTGCTC
AGGGAAGGCCTTATTGACGGCTCCGGCGTCACTGTCACTGGCAAAACCAT
GAAAGAGAATGTAGCCTCATGGCCCGAATTTTCACCTGAGCAGCCCATCA
TCCGCCCTCTAAGCAATCCCATCAAGCCAACCGGCCACTTGCAGATCCTT
CGTGGGTCATTGGCCCCTGGCGGTTCGGTTGGAAAAATCACCGGCAAAGA
AGGTTTACGGTTCGAAGGTCTTGCTAAATGTTACGACTTTGAGGACGCTT
TCATCGAGGCTCTCGAACGAGGCGAGATCAAGAAGGGCGAGAAAACGGTC
GTTATTATTCGATATGAAGGGCCCAAAGGCGGCCCCGGGATGCCTGAGAT
GCTCAAGCCCAGCTCAGCTATCATGGGCGCCGGATTGGGTCAGGATGTTG
CGCTACTCACTGATGGAAGATTCTCTGGAGGTAGTCATGGCTTTTTAATT
GGGCATGTTGTGCCTGAGGCTATGGAGGGCGGGCCCATTGCCCTGGTGAA
GGATGGCGATCGAATCGTAATTGATGCGGAGCAAAGAGTGGTCGACCTGC
TGATCACCCCAGAAGAAATGGCAAAGAGAAGAGTGTCTTGGACAGCACCG
GCACCTCGGGCGAAGAAGGGGACATTAAGCAAGTATGCGAAGCTGGTGAG
CGATGCGAGCCATGGGTGCGTGACGGATGGTCCAATATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009082branched-chain amino acid biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0004160dihydroxy-acid dehydratase activity
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_29315CAN33_29315Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29315-T1.exon1CAN33_29315-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_29315-T1.exon2CAN33_29315-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29315-T1.cdsCAN33_29315-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29315-T1CAN33_29315-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR037237
DBxrefInterPro:IPR020558
DBxrefInterPro:IPR004404
DBxrefInterPro:IPR000581
DBxrefInterPro:IPR042096
DBxrefPFAM:PF00920
Productdihydroxy-acid dehydratase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000008.1supercontigNKJJ01000008.1:693551..695463 +
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