You are here

Home

CAN33_29410-T1, CAN33_29410-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_29410-T1
Unique NameCAN33_29410-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000008.1:756039..757683+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_29410-T1 ID=CAN33_29410-T1|Name=CAN33_29410-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1645bp|location=Sequence derived from alignment at NKJJ01000008.1:756039..757683+ (Aspergillus niger FDAARGOS_311)
ATGAAGTATCGATGCCTCGCCTCTTTGGGCATTGCTGCCCTGGGTGCCGC
TGCGACGGTCTCTGCCAACCCACTGCTGAACCGCGAAGCTGAAGGTCAAT
GCCCCCAAGGCTACACCCAGAGCGTCTACTACAAGACTATCACCCTCCAG
CCCTCCTCGACTGCGTCAACTGCGCCAACCTCTACGCTCGCCAGTGCAGG
TGAAGGCCAATGTCCCGTTGGTTACACCCAGAGCGTCTACTACAAGACGA
TCCCTCTCCAGCCTACTTCAACTGCATCCGTCGAGCCAACTTCTGCTCCC
GCTGTTGAGCCAACCTCGACCCCTGCTGTCGAGTCGAGCTCTACCTCGAT
TGATCAGGTTACTACTCTGCACTCGTCTTCCACCGTTATCGTGACTGAGG
TCGTGACTGCAACCCCTGCGGTCGCCACCACGAGCTCCGCGGTCGAGAGC
GCTGCACCAGTTGCCACCACCCCTCCGCTGCCGAAGCTTCCCCTGCTGCT
GAGACTAGCACTGCTGTGGAGGCTACCTCTTCTTCCTCTTCCTCGGTCGT
TGAGGTGACGACCAATGCTGCTGCCAATGCCGCCGCAACTACTGCTGCCG
CTCAGCCTACCCCTGAGGCTGTTACCACTGAGGTTGCAACTACTGAAGCT
GCCGCGACCACCGAAGCAGCTGCCCAGCCTAGCCCTGAAGCCGCTACCAC
CGAGGCTGTTACTACCCAGGCTGCTGCTGCCGCTGCTACCACCGAAGCTG
CCACTACCCAGGAGGCTGCTGCTGCTGCTACCACTGAAGCCGTTGTTCAG
TCTACCGCTGAGGCCGCTACTACTGAGGCCGCCACTACCGAAGCTGCTGC
TGCTACCCAGGCCGCCGCCACTACTGTCGAATCCAAGTCTACTTCTACTA
GCTCGACCGCTGCTAGCGCCGCGACCTCGTCTGCCTCCAGCTCCAGCTCT
TCCACCTCTAGTGCCCTGAGTTCCGAGTACTCGGGTGAAGCAACTTTCTA
CGGCGGTAACGTCTCGGGCGGAACCTGCTCGTTCACCGAGTACACCATCC
CCTCTGGCCTCTTTGGCACGGCCCTCTCCTCCCAACGCTGGGACAACGCA
GCCGAATGTGGTGCCTGTGTCGAGGTCACTGGCCCTAGCGGTACCAAGAT
CAAGGCCATGGTAAGTCTTATCTCCTAAGCACTTCCCTACGCGCTTTTGT
TCCTTTCTTCCTGTCTCTAACAAACATCAAGGTTGTCGACGAATGCCCCG
AATGCGACTCCAACCACCTCGATCTCTTTGAGAGCGCCTTCTCTGAACTG
GCCGACATCTCTAAGGGCGTTATCAGCATCGACTGGGAGTACGTTGCCTG
CGGTATCACCTCCCCGATCGAACTGGTCAACAAGAGCGGCACCTCCGCCT
ACTGGTTCGCCATGCAGGTAGTCAACTCCAACCTGCCCGTCACCAAGCTC
GAGGTCAGCACCGACAGCGGTAGCACCTGGCAATCTACCACCCGTTCCTC
CTACAATTACTTCGAGAACCAGAGCGGTTTCGGTACTGACACCGTTGATG
TCCGTGTCACTGCCGAGGGTGGTTCTCAGATTACCGTCAAGAACGTCAGC
GTCTCGTCTGGCTCGTCTGTCACTGCTTCCTCCAACTTCGAGTAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000008.1:756039..757683+

>CAN33_29410-T1 ID=CAN33_29410-T1|Name=CAN33_29410-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3438bp|location=Sequence derived from alignment at NKJJ01000008.1:756039..757683+ (Aspergillus niger FDAARGOS_311)
ATGAAGTATCGATGCCTCGCCTCTTTGGGCATTGCTGCCCTGGGTGCCGC
TGCGACGGTCTCTGCCAACCCACTGCTGAACCGCGAAGCTGAAGGTCAAT
GCCCCCAAGGCTACACCCAGAGCGTCTACTACAAGACTATCACCCTCCAG
CCCTCCTCGACTGCGTCAACTGCGCCAACCTCTACGCTCGCCAGTGCAGG
TGAAGGCCAATGTCCCGTTGGTTACACCCAGAGCGTCTACTACAAGACGA
TCCCTCTCCAGCCTACTTCAACTGCATCCGTCGAGCCAACTTCTGCTCCC
GCTGTTGAGCCAACCTCGACCCCTGCTGTCGAGTCGAGCTCTACCTCGAT
TGATCAGGTTACTACTCTGCACTCGTCTTCCACCGTTATCGTGACTGAGG
TCGTGACTGCAACCCCTGCGGTCGCCACCACGAGCTCCGCGGTCGAGAGC
GCTGCACCATCTACTTCTACTAGCTCGACCGCTGCTAGCGCCGCGACCTC
GTCTGCCTCCAGCTCCAGCTCTTCCACCTCTAGTGCCCTGAGTTCCGAGT
ACTCGGGTGAAGCAACTTTCTACGGCGGTAACGTCTCGGGCGGAACCTGC
TCGTTCACCGAGTACACCATCCCCTCTGGCCTCTTTGGCACGGCCCTCTC
CTCCCAACGCTGGGACAACGCAGCCGAATGTGGTGCCTGTGTCGAGGTCA
CTGGCCCTAGCGGTACCAAGATCAAGGCCATGGTTGTCGACGAATGCCCC
GAATGCGACTCCAACCACCTCGATCTCTTTGAGAGCGCCTTCTCTGAACT
GGCCGACATCTCTAAGGGCGTTATCAGCATCGACTGGGAGTACGTTGCCT
GCGGTATCACCTCCCCGATCGAACTGGTCAACAAGAGCGGCACCTCCGCC
TACTGGTTCGCCATGCAGGTAGTCAACTCCAACCTGCCCGTCACCAAGCT
CGAGGTCAGCACCGACAGCGGTAGCACCTGGCAATCTACCACCCGTTCCT
CCTACAATTACTTCGAGAACCAGAGCGGTTTCGGTACTGACACCGTTGAT
GTCCGTGTCACTGCCGAGGGTGGTTCTCAGATTACCGTCAAGAACGTCAG
CGTCTCGTCTGGCTCGTCTGTCACTGCTTCCTCCAACTTCGAGTAAATGA
AGTATCGATGCCTCGCCTCTTTGGGCATTGCTGCCCTGGGTGCCGCTGCG
ACGGTCTCTGCCAACCCACTGCTGAACCGCGAAGCTGAAGGTCAATGCCC
CCAAGGCTACACCCAGAGCGTCTACTACAAGACTATCACCCTCCAGCCCT
CCTCGACTGCGTCAACTGCGCCAACCTCTACGCTCGCCAGTGCAGGTGAA
GGCCAATGTCCCGTTGGTTACACCCAGAGCGTCTACTACAAGACGATCCC
TCTCCAGCCTACTTCAACTGCATCCGTCGAGCCAACTTCTGCTCCCGCTG
TTGAGCCAACCTCGACCCCTGCTGTCGAGTCGAGCTCTACCTCGATTGAT
CAGGTTACTACTCTGCACTCGTCTTCCACCGTTATCGTGACTGAGGTCGT
GACTGCAACCCCTGCGGTCGCCACCACGAGCTCCGCGGTCGAGAGCGCTG
CACCATCTACTTCTACTAGCTCGACCGCTGCTAGCGCCGCGACCTCGTCT
GCCTCCAGCTCCAGCTCTTCCACCTCTAGTGCCCTGAGTTCCGAGTACTC
GGGTGAAGCAACTTTCTACGGCGGTAACGTCTCGGGCGGAACCTGCTCGT
TCACCGAGTACACCATCCCCTCTGGCCTCTTTGGCACGGCCCTCTCCTCC
CAACGCTGGGACAACGCAGCCGAATGTGGTGCCTGTGTCGAGGTCACTGG
CCCTAGCGGTACCAAGATCAAGGCCATGGTTGTCGACGAATGCCCCGAAT
GCGACTCCAACCACCTCGATCTCTTTGAGAGCGCCTTCTCTGAACTGGCC
GACATCTCTAAGGGCGTTATCAGCATCGACTGGGAGTACGTTGCCTGCGG
TATCACCTCCCCGATCGAACTGGTCAACAAGAGCGGCACCTCCGCCTACT
GGTTCGCCATGCAGGTAGTCAACTCCAACCTGCCCGTCACCAAGCTCGAG
GTCAGCACCGACAGCGGTAGCACCTGGCAATCTACCACCCGTTCCTCCTA
CAATTACTTCGAGAACCAGAGCGGTTTCGGTACTGACACCGTTGATGTCC
GTGTCACTGCCGAGGGTGGTTCTCAGATTACCGTCAAGAACGTCAGCGTC
TCGTCTGGCTCGTCTGTCACTGCTTCCTCCAACTTCGAGTAAATGAAGTA
TCGATGCCTCGCCTCTTTGGGCATTGCTGCCCTGGGTGCCGCTGCGACGG
TCTCTGCCAACCCACTGCTGAACCGCGAAGCTGAAGGTCAATGCCCCCAA
GGCTACACCCAGAGCGTCTACTACAAGACTATCACCCTCCAGCCCTCCTC
GACTGCGTCAACTGCGCCAACCTCTACGCTCGCCAGTGCAGGTGAAGGCC
AATGTCCCGTTGGTTACACCCAGAGCGTCTACTACAAGACGATCCCTCTC
CAGCCTACTTCAACTGCATCCGTCGAGCCAACTTCTGCTCCCGCTGTTGA
GCCAACCTCGACCCCTGCTGTCGAGTCGAGCTCTACCTCGATTGATCAGG
TTACTACTCTGCACTCGTCTTCCACCGTTATCGTGACTGAGGTCGTGACT
GCAACCCCTGCGGTCGCCACCACGAGCTCCGCGGTCGAGAGCGCTGCACC
ATCTACTTCTACTAGCTCGACCGCTGCTAGCGCCGCGACCTCGTCTGCCT
CCAGCTCCAGCTCTTCCACCTCTAGTGCCCTGAGTTCCGAGTACTCGGGT
GAAGCAACTTTCTACGGCGGTAACGTCTCGGGCGGAACCTGCTCGTTCAC
CGAGTACACCATCCCCTCTGGCCTCTTTGGCACGGCCCTCTCCTCCCAAC
GCTGGGACAACGCAGCCGAATGTGGTGCCTGTGTCGAGGTCACTGGCCCT
AGCGGTACCAAGATCAAGGCCATGGTTGTCGACGAATGCCCCGAATGCGA
CTCCAACCACCTCGATCTCTTTGAGAGCGCCTTCTCTGAACTGGCCGACA
TCTCTAAGGGCGTTATCAGCATCGACTGGGAGTACGTTGCCTGCGGTATC
ACCTCCCCGATCGAACTGGTCAACAAGAGCGGCACCTCCGCCTACTGGTT
CGCCATGCAGGTAGTCAACTCCAACCTGCCCGTCACCAAGCTCGAGGTCA
GCACCGACAGCGGTAGCACCTGGCAATCTACCACCCGTTCCTCCTACAAT
TACTTCGAGAACCAGAGCGGTTTCGGTACTGACACCGTTGATGTCCGTGT
CACTGCCGAGGGTGGTTCTCAGATTACCGTCAAGAACGTCAGCGTCTCGT
CTGGCTCGTCTGTCACTGCTTCCTCCAACTTCGAGTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_29410CAN33_29410Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29410-T1.exon1CAN33_29410-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_29410-T1.exon2CAN33_29410-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_29410-T1.exon3CAN33_29410-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29410-T1.cdsCAN33_29410-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29410-T1CAN33_29410-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-22)
NoteCAZy:CBM63
DBxrefInterPro:IPR007112
DBxrefInterPro:IPR036908
DBxrefInterPro:IPR036749
DBxrefInterPro:IPR009009
DBxrefPFAM:PF03330
ProductRare lipoprotein A (RlpA)-like double-psi beta-barrel family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000008.1supercontigNKJJ01000008.1:756039..757683 +
Powered by Drupal