|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000008.1:820281..820984+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_29470-T1 ID=CAN33_29470-T1|Name=CAN33_29470-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=704bp|location=Sequence derived from alignment at NKJJ01000008.1:820281..820984+ (Aspergillus niger FDAARGOS_311)
ATGTCTGCCATTGCCTCAGCGCTGCGCCCTACCCTCCGCGCCTCCTCCGG
CGCCGCCCTGTCCACGCGTTCCTTCAGCTCTTCCTCATCCCGTTCCATTG
CTCGTATCATGATTACGGGTCGTCTGGCTGGCCAACCCGAGGTGCAGGCC
ACCGCTTCTGGCCAAGAAGTCATCAGATACACCGTGGCCTCTAACCAGAA
CTCGAAGGATAAGCGCCCGCCGAGCTTCTTCAAGGTGTCGGCCTTCAGTG
AGGGAAACCAGCGCGAGTTCATCACCAACTTGCAGACGGGGTAAGTCTTC
CTGCCCGTTAACTTTAATCTTTCCTTCGAACCGCAGATATGCGTGTTTGC
TGTTTCATTTGTCTCCTCTGAATGCGGCGTTTAATTCACATCCTCTTCGG
GTCTCACTATCCAATCCGCTAACTTTCTTTTCTTGTCACCAGTACTCTTG
TGTTTGTCGAGGGAGACGCGACCATGCGCCAGTGGGAGAACGCAGAGGGC
AAGAAGCAGACGGCCCTGAACATCACCCAGCGTACGTTATCGTCCACATC
CGCCCCTTAAATCATGTGAAAACAAACTACATACTCCCTTATACTGTATT
GCGGAAGTACTAATATGTCCTACTTATAATCCGCAGGCGCTCTTGAGGTC
CTCAAGCGTCCATACAACCCTGAAGCCTTCTCTGAGGAGCAGCAGCAGGA
GTAG back to topCoding sequence (CDS) from alignment at NKJJ01000008.1:820281..820984+ >CAN33_29470-T1 ID=CAN33_29470-T1|Name=CAN33_29470-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1341bp|location=Sequence derived from alignment at NKJJ01000008.1:820281..820984+ (Aspergillus niger FDAARGOS_311)
ATGTCTGCCATTGCCTCAGCGCTGCGCCCTACCCTCCGCGCCTCCTCCGG
CGCCGCCCTGTCCACGCGTTCCTTCAGCTCTTCCTCATCCCGTTCCATTG
CTCGTATCATGATTACGGGTCGTCTGGCTGGCCAACCCGAGGTGCAGGCC
ACCGCTTCTGGCCAAGAAGTCATCAGATACACCGTGGCCTCTAACCAGAA
CTCGAAGGATAAGCGCCCGCCGAGCTTCTTCAAGGTGTCGGCCTTCAGTG
AGGGAAACCAGCGCGAGTTCATCACCAACTTGCAGACGGGTACTCTTGTG
TTTGTCGAGGGAGACGCGACCATGCGCCAGTGGGAGAACGCAGAGGGCAA
GAAGCAGACGGCCCTGAACATCACCCAGCGCGCTCTTGAGGTCCTCAAGC
GTCCATACAACCCTGAAGCCTTCTCTGAGGAGCAGCAGCAGGAGTAGATG
TCTGCCATTGCCTCAGCGCTGCGCCCTACCCTCCGCGCCTCCTCCGGCGC
CGCCCTGTCCACGCGTTCCTTCAGCTCTTCCTCATCCCGTTCCATTGCTC
GTATCATGATTACGGGTCGTCTGGCTGGCCAACCCGAGGTGCAGGCCACC
GCTTCTGGCCAAGAAGTCATCAGATACACCGTGGCCTCTAACCAGAACTC
GAAGGATAAGCGCCCGCCGAGCTTCTTCAAGGTGTCGGCCTTCAGTGAGG
GAAACCAGCGCGAGTTCATCACCAACTTGCAGACGGGTACTCTTGTGTTT
GTCGAGGGAGACGCGACCATGCGCCAGTGGGAGAACGCAGAGGGCAAGAA
GCAGACGGCCCTGAACATCACCCAGCGCGCTCTTGAGGTCCTCAAGCGTC
CATACAACCCTGAAGCCTTCTCTGAGGAGCAGCAGCAGGAGTAGATGTCT
GCCATTGCCTCAGCGCTGCGCCCTACCCTCCGCGCCTCCTCCGGCGCCGC
CCTGTCCACGCGTTCCTTCAGCTCTTCCTCATCCCGTTCCATTGCTCGTA
TCATGATTACGGGTCGTCTGGCTGGCCAACCCGAGGTGCAGGCCACCGCT
TCTGGCCAAGAAGTCATCAGATACACCGTGGCCTCTAACCAGAACTCGAA
GGATAAGCGCCCGCCGAGCTTCTTCAAGGTGTCGGCCTTCAGTGAGGGAA
ACCAGCGCGAGTTCATCACCAACTTGCAGACGGGTACTCTTGTGTTTGTC
GAGGGAGACGCGACCATGCGCCAGTGGGAGAACGCAGAGGGCAAGAAGCA
GACGGCCCTGAACATCACCCAGCGCGCTCTTGAGGTCCTCAAGCGTCCAT
ACAACCCTGAAGCCTTCTCTGAGGAGCAGCAGCAGGAGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006260 | DNA replication |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003697 | single-stranded DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| Note | BUSCO:EOG09265JNA |
| DBxref | InterPro:IPR012340 |
| DBxref | InterPro:IPR000424 |
| DBxref | InterPro:IPR011344 |
| DBxref | PFAM:PF00436 |
| Product | Single-strand binding protein family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000008.1 | supercontig | NKJJ01000008.1:820281..820984 + |
|
