You are here

Home

CAN33_29720-T1, CAN33_29720-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_29720-T1
Unique NameCAN33_29720-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000008.1:975341..976543+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_29720-T1 ID=CAN33_29720-T1|Name=CAN33_29720-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1203bp|location=Sequence derived from alignment at NKJJ01000008.1:975341..976543+ (Aspergillus niger FDAARGOS_311)
ATGAGCAAGCGTCCTCATCAAGGGTCCCCGCCCCGCCCTGCCTCCCAGTC
TCCCGATCTGGTGGATCACACCCCCCAGGGCCTCTCGCCTGGGGATCCAG
AGCAACAGCAACATGCATCCGGGCCCAGCAAAAAGCCCCGAAACTTTATA
GCCACAGTGGTTGGTGCTTCCCGTTGTCAGTAATGTGAGAGATAGTAGTA
GTAACCACTCCACTTAGGCATGTGAGAATTGCAGGCTTAAAAAGACGCGA
TGTGATGAGTCGCGACCGAAGTGCGGCTTGTGTAAGTCGCTGAACCTCGA
TTGCGTCTACAATGAGCGCAAGACCTCCAAGTAAGGCCGATTCACATTCA
CCAGTCCTTCCTGTTCCATTTTGCTAATGCTTAGCGTAGACGGGACCATT
CCCTCAGCTTGATAATGAGCACATTACATCGACTGGAAACTAAGCTGGAG
AATGTTCCCATGACCATTTCCAAGGAAATCCACTCCCTTCGGGGTCAGAT
GCCCCGTAGTTTGGATGGCACGGAGACAATGAGCTCGCTCGCGCATCACT
CTCGCAGCACGAGCAGCTTGGGTAAGTTGGAATGCTTGGGCTCTCAGACT
CTCACGCCTGAAGCAATGCGACTGAACGAAGTGGAGAATGACGACCAACA
CCTGCATCCCAATCCGACGGAGGCAAACGGGCTAGTCTCGATTTCATTCA
GCCAGCATGGTGTGATATCCTGGTTAGGTGCTCAGAAGATCCTCCCACAA
CGGTTACTCGAAGCTCACGAGAAACTGGGCAAGAACTATGTGATTGACAT
GGAAATGAAGCGCCCTCAATTGCCCATGTACATCTGTCCTTTCCCAGCGC
AGGCCGGGGACAACTGGTTGAACGCACTTCCATTGGCTATGGTTAAGGGC
CTTTCGGATGCTTTCTTCACCACTTTCAACCTGTTTACACCCATAATCGA
CAAGAACTATTACTATGCCTTCACCCTGGGTGCGGCGATTGAGAGCAACT
TTGGCTACAATATCGAGAGCTGTGTGGTTCTCAATATCATGGCGCTAGGC
TGCATCGCTGTCCACGCCTACCAGGAAGGGGATTTCCCATTACTAGGGAC
GCGCAGTGGTCGTTTCGAGCCTCCTGACTGGATGGGGGTGGTCTACGAGG
AGCCCCCGGATTGCGCTTCTTCAACACTGCTCGCCAGCGCATTGGGTTTC
TAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000008.1:975341..976543+

>CAN33_29720-T1 ID=CAN33_29720-T1|Name=CAN33_29720-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3258bp|location=Sequence derived from alignment at NKJJ01000008.1:975341..976543+ (Aspergillus niger FDAARGOS_311)
ATGAGCAAGCGTCCTCATCAAGGGTCCCCGCCCCGCCCTGCCTCCCAGTC
TCCCGATCTGGTGGATCACACCCCCCAGGGCCTCTCGCCTGGGGATCCAG
AGCAACAGCAACATGCATCCGGGCCCAGCAAAAAGCCCCGAAACTTTATA
GCCACAGTGGCATGTGAGAATTGCAGGCTTAAAAAGACGCGATGTGATGA
GTCGCGACCGAAGTGCGGCTTGTGTAAGTCGCTGAACCTCGATTGCGTCT
ACAATGAGCGCAAGACCTCCAAACGGGACCATTCCCTCAGCTTGATAATG
AGCACATTACATCGACTGGAAACTAAGCTGGAGAATGTTCCCATGACCAT
TTCCAAGGAAATCCACTCCCTTCGGGGTCAGATGCCCCGTAGTTTGGATG
GCACGGAGACAATGAGCTCGCTCGCGCATCACTCTCGCAGCACGAGCAGC
TTGGGTAAGTTGGAATGCTTGGGCTCTCAGACTCTCACGCCTGAAGCAAT
GCGACTGAACGAAGTGGAGAATGACGACCAACACCTGCATCCCAATCCGA
CGGAGGCAAACGGGCTAGTCTCGATTTCATTCAGCCAGCATGGTGTGATA
TCCTGGTTAGGTGCTCAGAAGATCCTCCCACAACGGTTACTCGAAGCTCA
CGAGAAACTGGGCAAGAACTATGTGATTGACATGGAAATGAAGCGCCCTC
AATTGCCCATGTACATCTGTCCTTTCCCAGCGCAGGCCGGGGACAACTGG
TTGAACGCACTTCCATTGGCTATGGTTAAGGGCCTTTCGGATGCTTTCTT
CACCACTTTCAACCTGTTTACACCCATAATCGACAAGAACTATTACTATG
CCTTCACCCTGGGTGCGGCGATTGAGAGCAACTTTGGCTACAATATCGAG
AGCTGTGTGGTTCTCAATATCATGGCGCTAGGCTGCATCGCTGTCCACGC
CTACCAGGAAGGGGATTTCCCATTACTAGGGACGCGCAGTGGTCGTTTCG
AGCCTCCTGACTGGATGGGGGTGGTCTACGAGGAGCCCCCGGATTGCGCT
TCTTCAACACTGCTCGCCAGCGCATTGGGTTTCTAAATGAGCAAGCGTCC
TCATCAAGGGTCCCCGCCCCGCCCTGCCTCCCAGTCTCCCGATCTGGTGG
ATCACACCCCCCAGGGCCTCTCGCCTGGGGATCCAGAGCAACAGCAACAT
GCATCCGGGCCCAGCAAAAAGCCCCGAAACTTTATAGCCACAGTGGCATG
TGAGAATTGCAGGCTTAAAAAGACGCGATGTGATGAGTCGCGACCGAAGT
GCGGCTTGTGTAAGTCGCTGAACCTCGATTGCGTCTACAATGAGCGCAAG
ACCTCCAAACGGGACCATTCCCTCAGCTTGATAATGAGCACATTACATCG
ACTGGAAACTAAGCTGGAGAATGTTCCCATGACCATTTCCAAGGAAATCC
ACTCCCTTCGGGGTCAGATGCCCCGTAGTTTGGATGGCACGGAGACAATG
AGCTCGCTCGCGCATCACTCTCGCAGCACGAGCAGCTTGGGTAAGTTGGA
ATGCTTGGGCTCTCAGACTCTCACGCCTGAAGCAATGCGACTGAACGAAG
TGGAGAATGACGACCAACACCTGCATCCCAATCCGACGGAGGCAAACGGG
CTAGTCTCGATTTCATTCAGCCAGCATGGTGTGATATCCTGGTTAGGTGC
TCAGAAGATCCTCCCACAACGGTTACTCGAAGCTCACGAGAAACTGGGCA
AGAACTATGTGATTGACATGGAAATGAAGCGCCCTCAATTGCCCATGTAC
ATCTGTCCTTTCCCAGCGCAGGCCGGGGACAACTGGTTGAACGCACTTCC
ATTGGCTATGGTTAAGGGCCTTTCGGATGCTTTCTTCACCACTTTCAACC
TGTTTACACCCATAATCGACAAGAACTATTACTATGCCTTCACCCTGGGT
GCGGCGATTGAGAGCAACTTTGGCTACAATATCGAGAGCTGTGTGGTTCT
CAATATCATGGCGCTAGGCTGCATCGCTGTCCACGCCTACCAGGAAGGGG
ATTTCCCATTACTAGGGACGCGCAGTGGTCGTTTCGAGCCTCCTGACTGG
ATGGGGGTGGTCTACGAGGAGCCCCCGGATTGCGCTTCTTCAACACTGCT
CGCCAGCGCATTGGGTTTCTAAATGAGCAAGCGTCCTCATCAAGGGTCCC
CGCCCCGCCCTGCCTCCCAGTCTCCCGATCTGGTGGATCACACCCCCCAG
GGCCTCTCGCCTGGGGATCCAGAGCAACAGCAACATGCATCCGGGCCCAG
CAAAAAGCCCCGAAACTTTATAGCCACAGTGGCATGTGAGAATTGCAGGC
TTAAAAAGACGCGATGTGATGAGTCGCGACCGAAGTGCGGCTTGTGTAAG
TCGCTGAACCTCGATTGCGTCTACAATGAGCGCAAGACCTCCAAACGGGA
CCATTCCCTCAGCTTGATAATGAGCACATTACATCGACTGGAAACTAAGC
TGGAGAATGTTCCCATGACCATTTCCAAGGAAATCCACTCCCTTCGGGGT
CAGATGCCCCGTAGTTTGGATGGCACGGAGACAATGAGCTCGCTCGCGCA
TCACTCTCGCAGCACGAGCAGCTTGGGTAAGTTGGAATGCTTGGGCTCTC
AGACTCTCACGCCTGAAGCAATGCGACTGAACGAAGTGGAGAATGACGAC
CAACACCTGCATCCCAATCCGACGGAGGCAAACGGGCTAGTCTCGATTTC
ATTCAGCCAGCATGGTGTGATATCCTGGTTAGGTGCTCAGAAGATCCTCC
CACAACGGTTACTCGAAGCTCACGAGAAACTGGGCAAGAACTATGTGATT
GACATGGAAATGAAGCGCCCTCAATTGCCCATGTACATCTGTCCTTTCCC
AGCGCAGGCCGGGGACAACTGGTTGAACGCACTTCCATTGGCTATGGTTA
AGGGCCTTTCGGATGCTTTCTTCACCACTTTCAACCTGTTTACACCCATA
ATCGACAAGAACTATTACTATGCCTTCACCCTGGGTGCGGCGATTGAGAG
CAACTTTGGCTACAATATCGAGAGCTGTGTGGTTCTCAATATCATGGCGC
TAGGCTGCATCGCTGTCCACGCCTACCAGGAAGGGGATTTCCCATTACTA
GGGACGCGCAGTGGTCGTTTCGAGCCTCCTGACTGGATGGGGGTGGTCTA
CGAGGAGCCCCCGGATTGCGCTTCTTCAACACTGCTCGCCAGCGCATTGG
GTTTCTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_29720CAN33_29720Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29720-T1.exon1CAN33_29720-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_29720-T1.exon2CAN33_29720-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_29720-T1.exon3CAN33_29720-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29720-T1.cdsCAN33_29720-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29720-T1CAN33_29720-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
ProductFungal Zn(2)-Cys(6) binuclear cluster domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000008.1supercontigNKJJ01000008.1:975341..976543 +
Powered by Drupal