You are here

Home

CAN33_29820-T1, CAN33_29820-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_29820-T1
Unique NameCAN33_29820-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000003.1:67928..68369+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_29820-T1 ID=CAN33_29820-T1|Name=CAN33_29820-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=442bp|location=Sequence derived from alignment at NKJJ01000003.1:67928..68369+ (Aspergillus niger FDAARGOS_311)
ATGGCTTACTACCTTCTCTACTTCCTCACGATATCGGTTGTTGTGTGTGG
CACAGGTATGCGAGATTTCCAACCCCTCAGACTTGCAAGCCGTCCAAGTT
TTCCTTCCTGACCTGCCTATAGCGCTCTACCTCACCCGGTCCCGATGGCT
ACCTCTACTGCCAGTTCCCGATTACATTTACGATCGTCTCCCCTCGACTT
TTGCCGGCGATGTGGAAGCTGGTCTGGTCTCATCAGAGTTTGATATCTCT
GCCAATATTGCAGAGGGCGACACCAGGGCGGGCTTGGATGATCAGGCCAA
ACGCGAAATCTTACGGATCATGAAACGGCGAAGAGTGGATTTCAATGAAG
GTCGTCGAATCTACATGGAGCAGCGCTTTTCCAAGAACAACATCGGTCCC
GATGGCCGACCTAGGGACCCAAAGTTCGTGTCATTCTCTTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000003.1:67928..68369+

>CAN33_29820-T1 ID=CAN33_29820-T1|Name=CAN33_29820-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=750bp|location=Sequence derived from alignment at NKJJ01000003.1:67928..68369+ (Aspergillus niger FDAARGOS_311)
ATGGCTTACTACCTTCTCTACTTCCTCACGATATCGGTTGTTGTGTGTGG
CACAGCGCTCTACCTCACCCGGTCCCGATGGCTACCTCTACTGCCAGTTC
CCGATTACATTTACGATCGTCTCCCCTCGACTTTTGCCGGCGATGTGGAA
GCTGGTCTGGTCTCATCAGAGTTTGATATCTCTGCCAATATTGCAGAGGG
CGACACCAGGGCGGGCTTGGATGATCAGGCCAAACGCGAAATCTTACGGA
TCATGAAACGGCGAAGAGTGGATTTCAATGAAGGTCGTCGAATCTACATG
GAGCAGCGCTTTTCCAAGAACAACATCGGTCCCGATGGCCGACCTAGGGA
CCCAAAGTTCGTGTCATTCTCTTGAATGGCTTACTACCTTCTCTACTTCC
TCACGATATCGGTTGTTGTGTGTGGCACAGCGCTCTACCTCACCCGGTCC
CGATGGCTACCTCTACTGCCAGTTCCCGATTACATTTACGATCGTCTCCC
CTCGACTTTTGCCGGCGATGTGGAAGCTGGTCTGGTCTCATCAGAGTTTG
ATATCTCTGCCAATATTGCAGAGGGCGACACCAGGGCGGGCTTGGATGAT
CAGGCCAAACGCGAAATCTTACGGATCATGAAACGGCGAAGAGTGGATTT
CAATGAAGGTCGTCGAATCTACATGGAGCAGCGCTTTTCCAAGAACAACA
TCGGTCCCGATGGCCGACCTAGGGACCCAAAGTTCGTGTCATTCTCTTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_29820CAN33_29820Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29820-T1.exon1CAN33_29820-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_29820-T1.exon2CAN33_29820-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29820-T1.cdsCAN33_29820-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29820-T1CAN33_29820-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG09265I7S
DBxrefInterPro:IPR018559
DBxrefPFAM:PF09435
ProductFungal protein of unknown function (DUF2015) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000003.1supercontigNKJJ01000003.1:67928..68369 +
Powered by Drupal