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CAN33_30115-T1, CAN33_30115-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_30115-T1
Unique NameCAN33_30115-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000003.1:245224..245873-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_30115-T1 ID=CAN33_30115-T1|Name=CAN33_30115-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=650bp|location=Sequence derived from alignment at NKJJ01000003.1:245224..245873- (Aspergillus niger FDAARGOS_311)
ATGCCTGCCTCCGTCCACTCCGAAGAACAAGACCAGTCCATGCTGGACGC
CTCCGCGCCTCAAGAGCAAGAGCAGACCGATGTCCTAGAGCTGGACGAGA
AGCGCATTGTTGTTGTACGTATACACTACATACACTGTGTGGACATGATT
CACTTCCGGGCGTATGCTAATACCTGCTGGATGGGATAGTTGCCCGGCTC
GTCCGACACCGCAGCTTCGTTCCAATTCGAGGGAGAGGGTCACACTCTGG
GCAATGCGCTGCGGTATGCGATTATGAAGAAGTGCGTACACATACTCTAC
TTTATTACAAACCTCTCTCTTCACTGTTATGTTGGATCTTGCTAACGAGT
TTTCCTTGGGTTCAGCCCCGAAGTCGAATTCTGCGGTTACACCATCCCCC
ATCCTTCCGAGACGAAGATGAACCTTCGTATTCAGACTTATGGTTTGTTC
TTCCCGCCCTCCTACCTTCTTTTCCGTCAGAATTAAGATCACCAGTATTA
ATGAATGAACAAACAGAAACTACCACCGCCGTCGAAGCCCTCGAGAAAGG
TCTCGACACTCTAATGGACCTCTGTGATGTCGTGACGGACAAGTTCACGA
CTGCCCGTGATGACTTTAATGCTGCGCAGGCGGATCGCATGGAGGCTTAG
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Coding sequence (CDS) from alignment at NKJJ01000003.1:245224..245873-

>CAN33_30115-T1 ID=CAN33_30115-T1|Name=CAN33_30115-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1668bp|location=Sequence derived from alignment at NKJJ01000003.1:245224..245873- (Aspergillus niger FDAARGOS_311)
AAACTACCACCGCCGTCGAAGCCCTCGAGAAAGGTCTCGACACTCTAATG
GACCTCTGTGATGTCGTGACGGACAAGTTCACGACTGCCCGTGATGACTT
TAATGCTGCGCAGGCGGATCGCATGGAGGCTTAGCCCCGAAGTCGAATTC
TGCGGTTACACCATCCCCCATCCTTCCGAGACGAAGATGAACCTTCGTAT
TCAGACTTATGTTGCCCGGCTCGTCCGACACCGCAGCTTCGTTCCAATTC
GAGGGAGAGGGTCACACTCTGGGCAATGCGCTGCGGTATGCGATTATGAA
GAAATGCCTGCCTCCGTCCACTCCGAAGAACAAGACCAGTCCATGCTGGA
CGCCTCCGCGCCTCAAGAGCAAGAGCAGACCGATGTCCTAGAGCTGGACG
AGAAGCGCATTGTTGTTAAACTACCACCGCCGTCGAAGCCCTCGAGAAAG
GTCTCGACACTCTAATGGACCTCTGTGATGTCGTGACGGACAAGTTCACG
ACTGCCCGTGATGACTTTAATGCTGCGCAGGCGGATCGCATGGAGGCTTA
GCCCCGAAGTCGAATTCTGCGGTTACACCATCCCCCATCCTTCCGAGACG
AAGATGAACCTTCGTATTCAGACTTATGTTGCCCGGCTCGTCCGACACCG
CAGCTTCGTTCCAATTCGAGGGAGAGGGTCACACTCTGGGCAATGCGCTG
CGGTATGCGATTATGAAGAAATGCCTGCCTCCGTCCACTCCGAAGAACAA
GACCAGTCCATGCTGGACGCCTCCGCGCCTCAAGAGCAAGAGCAGACCGA
TGTCCTAGAGCTGGACGAGAAGCGCATTGTTGTTAAACTACCACCGCCGT
CGAAGCCCTCGAGAAAGGTCTCGACACTCTAATGGACCTCTGTGATGTCG
TGACGGACAAGTTCACGACTGCCCGTGATGACTTTAATGCTGCGCAGGCG
GATCGCATGGAGGCTTAGCCCCGAAGTCGAATTCTGCGGTTACACCATCC
CCCATCCTTCCGAGACGAAGATGAACCTTCGTATTCAGACTTATGTTGCC
CGGCTCGTCCGACACCGCAGCTTCGTTCCAATTCGAGGGAGAGGGTCACA
CTCTGGGCAATGCGCTGCGGTATGCGATTATGAAGAAATGCCTGCCTCCG
TCCACTCCGAAGAACAAGACCAGTCCATGCTGGACGCCTCCGCGCCTCAA
GAGCAAGAGCAGACCGATGTCCTAGAGCTGGACGAGAAGCGCATTGTTGT
TAAACTACCACCGCCGTCGAAGCCCTCGAGAAAGGTCTCGACACTCTAAT
GGACCTCTGTGATGTCGTGACGGACAAGTTCACGACTGCCCGTGATGACT
TTAATGCTGCGCAGGCGGATCGCATGGAGGCTTAGCCCCGAAGTCGAATT
CTGCGGTTACACCATCCCCCATCCTTCCGAGACGAAGATGAACCTTCGTA
TTCAGACTTATGTTGCCCGGCTCGTCCGACACCGCAGCTTCGTTCCAATT
CGAGGGAGAGGGTCACACTCTGGGCAATGCGCTGCGGTATGCGATTATGA
AGAAATGCCTGCCTCCGTCCACTCCGAAGAACAAGACCAGTCCATGCTGG
ACGCCTCCGCGCCTCAAGAGCAAGAGCAGACCGATGTCCTAGAGCTGGAC
GAGAAGCGCATTGTTGTT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003899DNA-directed 5'-3' RNA polymerase activity
GO:0003677DNA binding
GO:0046983protein dimerization activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPC19CAN33_30115Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_30115-T1CAN33_30115-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_30115-T1.cdsCAN33_30115-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_30115-T1.exon4CAN33_30115-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_30115-T1.exon3CAN33_30115-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_30115-T1.exon2CAN33_30115-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_30115-T1.exon1CAN33_30115-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR033898
DBxrefInterPro:IPR008193
DBxrefInterPro:IPR009025
DBxrefInterPro:IPR036603
DBxrefPFAM:PF13656
DBxrefPFAM:PF01193
ProductRNA polymerase subunit AC19
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000003.1supercontigNKJJ01000003.1:245224..245873 -
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