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CAN33_3030-T1, CAN33_3030-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_3030-T1
Unique NameCAN33_3030-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:1891455..1892255+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_3030-T1 ID=CAN33_3030-T1|Name=CAN33_3030-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=801bp|location=Sequence derived from alignment at NKJJ01000004.1:1891455..1892255+ (Aspergillus niger FDAARGOS_311)
ATGGGATCAACAACTCAACCTCAACCCACCACGACGAACGAGGACAAAAA
CACAGTGCCAGAATCGGAGTCCTCATCATCCTCATCATATAAACTCCGAT
TCTGCACCGTGTGCGCCTCCAATCAGAACCGCTCTATGGAAGCCCACCTC
CGTCTCTCCACAGCGACGAGTCCCTTCCCTGTAATTTCCTTCGGGACGGG
CTCTCTAGTCCGGTTGCCCGGGCCCTCAATCACCCAACCCAACGTCTACA
ACTTCAACACAACCTCGTACTCTCAAATGTACGACGAGCTGCTCTCCAAA
GACGAGCGTCTCTACCGCAACAACGGCCTCCTGAACATGCTCGAGCGCAA
CCGTAACTTGAAATGGGGCCCGGAGCGCTTCCAGGACTGGGTACCGGGAC
AGCCGCGCGTCGAGCACGTCTCGAAGGGCGATAAGGGCGCCCTAGGTACT
GAAGGCGGCGTTGTCGATGTAATCATCACCTGTGAAGAACGGTGCTGGGA
TGCCGTGGTAGACGATCTTATGAATAAGGGCTCACCCTTGAACCGGCCCG
TGCATGTCTTCAACGTGGATATCAAGGATAATCACGAAGAGGCATTAGTA
GGAGGCAAGGCTATCTTGGATCTAGCGAATCGGTTAAACGAGGCTGCCTC
GCAGGAGAGAAAGACGAATGGTGCCGATGGATGGGAGAACGGAGTCGGTG
AGGCGAGACGGAATTTCGATGCTCGCGTGCCTGATATCCTGGCTGAGTGG
CAGGAGAGATGGCCTCATTTGCCGGCTTTGTGGACACTGGCTTGGCTATA
G
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Coding sequence (CDS) from alignment at NKJJ01000004.1:1891455..1892255+

>CAN33_3030-T1 ID=CAN33_3030-T1|Name=CAN33_3030-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=801bp|location=Sequence derived from alignment at NKJJ01000004.1:1891455..1892255+ (Aspergillus niger FDAARGOS_311)
ATGGGATCAACAACTCAACCTCAACCCACCACGACGAACGAGGACAAAAA
CACAGTGCCAGAATCGGAGTCCTCATCATCCTCATCATATAAACTCCGAT
TCTGCACCGTGTGCGCCTCCAATCAGAACCGCTCTATGGAAGCCCACCTC
CGTCTCTCCACAGCGACGAGTCCCTTCCCTGTAATTTCCTTCGGGACGGG
CTCTCTAGTCCGGTTGCCCGGGCCCTCAATCACCCAACCCAACGTCTACA
ACTTCAACACAACCTCGTACTCTCAAATGTACGACGAGCTGCTCTCCAAA
GACGAGCGTCTCTACCGCAACAACGGCCTCCTGAACATGCTCGAGCGCAA
CCGTAACTTGAAATGGGGCCCGGAGCGCTTCCAGGACTGGGTACCGGGAC
AGCCGCGCGTCGAGCACGTCTCGAAGGGCGATAAGGGCGCCCTAGGTACT
GAAGGCGGCGTTGTCGATGTAATCATCACCTGTGAAGAACGGTGCTGGGA
TGCCGTGGTAGACGATCTTATGAATAAGGGCTCACCCTTGAACCGGCCCG
TGCATGTCTTCAACGTGGATATCAAGGATAATCACGAAGAGGCATTAGTA
GGAGGCAAGGCTATCTTGGATCTAGCGAATCGGTTAAACGAGGCTGCCTC
GCAGGAGAGAAAGACGAATGGTGCCGATGGATGGGAGAACGGAGTCGGTG
AGGCGAGACGGAATTTCGATGCTCGCGTGCCTGATATCCTGGCTGAGTGG
CAGGAGAGATGGCCTCATTTGCCGGCTTTGTGGACACTGGCTTGGCTATA
G
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0004721phosphoprotein phosphatase activity
Vocabulary: Biological Process
TermDefinition
GO:0006397mRNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SSU72CAN33_3030Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3030-T1.exon1CAN33_3030-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3030-T1.cdsCAN33_3030-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3030-T1CAN33_3030-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264JW6
DBxrefInterPro:IPR006811
DBxrefPFAM:PF04722
ProductRNA polymerase II subunit A C-terminal domain phosphatase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:1891455..1892255 +
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