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CAN33_3035-T1, CAN33_3035-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_3035-T1
Unique NameCAN33_3035-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:1892953..1894407-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_3035-T1 ID=CAN33_3035-T1|Name=CAN33_3035-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1455bp|location=Sequence derived from alignment at NKJJ01000004.1:1892953..1894407- (Aspergillus niger FDAARGOS_311)
ATGGCCCGCTCCGCCATTGTCCAAGAATACGCCCCTCCGTCCTCCGCACC
CACCTTCTCCGTCGACCGCAAAGTCACCCACGAGCGCCAACAAAATGGCA
TTTCTCGCCCCAATGGATATCGCGTCTCCTGGCATGCCAATCCCGCCGTC
GAACCACACCACTTTGGCCAGTCCCATCCCATGAAGCCATGGCGTCTGAC
CCTCACAAAACAGCTGGTCATGGCCTACGGCATGCACCATGCGATGGACC
TCTACCTGGCGCGCGCAGCCACCTACGAAGAGCTGGCGGACTTCCACAAA
TCAGATTACCTCGATTTCCTACAGCAAGTCGTCCCCGGCGATATGGAGAA
TCCTGAACAGAGCGAGAACATCGCGCGCTTCAACTTCGGTGACGATTGCC
CCATCTTCGACGGCCTCTACAACTACTGCTCCCTCTACGCCGGCGGTACC
ATCGACGCAGCCCGAAAGCTCTGCAACAACCAGTCGGAGATCGCAGTCAA
CTGGTCTGGTGGCCTACATCACGCCAAAAAAGCCGAAGCCAGCGGTTTCT
GCTACATCAACGACATCGTCCTCGGCATCCTGCAGCTCCTCCGCCTGCAC
CCGCGCGTCATGTACATCGACATCGACGTCCACCACGGCGACGGCGTGGA
ACAAGCCTTCTGGTCCACCGACCGCGTCCTCACCGTCTCCTTCCACAAAT
ACGACAAGGACAACTTCTTCCCCGGCACCGGTGGCCTCGACAGCACGGGG
CCCACCCATCCCCTCAACCCGGGCGCCCACCACTCCGTCAACGTCCCCCT
CCACGACGGCATCGACGACGAATCCTACATCCAACTCTTCCGCGACGTCG
TCGGCTCCTGCGTCGAAGTCTACCGACCGGGCGCCATCGTCCTCCAATGC
GGTGCCGACTCCCTCGGCTGCGACCGTCTCGGCTGCTTCAACCTGAACGT
CGCCGCCCACGGCGCCTGCGTCGCCTTCGTCAAAACTTTTAACCTCCCTC
TCCTCGTCGTCGGTGGCGGTGGCTACACCCCACGCAACGTCTCCCGCGCC
TGGGCTCACGAAACCTCCATCCTCATCGACGCCCAGGATACCATCGACCC
TCACATCCCCGAAACCGTCACCTTCCGCAACCACTTCGGCCCTGACTTCT
CTCTCTTCCCGCCCCTCTCGGAAATGCGCAAGCTCGAAAACAAGAACCCT
CGCACTTATCTCGCCGGCTTGCTCCAGTCCATCCGCGAACAGCTTCGATA
CATCCAAGGTGCCCCGAGCGTGCAAATGAGCTTCATTCCTCCGGATATTC
TCGGTCTTCGCGAAGACACGGAGAAGGAAATCGAAGAAGAGACAGCCATG
ATGGAGGAGGAGCGCGAGGAACGATCTGGTGGTGGTAGTTTAGGGAAGTC
GAGTCGACGGAGGGATTTGGAGAGAGGTGCTGGGCAGCGGGGGGAGCTGT
TTTAA
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Coding sequence (CDS) from alignment at NKJJ01000004.1:1892953..1894407-

>CAN33_3035-T1 ID=CAN33_3035-T1|Name=CAN33_3035-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1455bp|location=Sequence derived from alignment at NKJJ01000004.1:1892953..1894407- (Aspergillus niger FDAARGOS_311)
ATGGCCCGCTCCGCCATTGTCCAAGAATACGCCCCTCCGTCCTCCGCACC
CACCTTCTCCGTCGACCGCAAAGTCACCCACGAGCGCCAACAAAATGGCA
TTTCTCGCCCCAATGGATATCGCGTCTCCTGGCATGCCAATCCCGCCGTC
GAACCACACCACTTTGGCCAGTCCCATCCCATGAAGCCATGGCGTCTGAC
CCTCACAAAACAGCTGGTCATGGCCTACGGCATGCACCATGCGATGGACC
TCTACCTGGCGCGCGCAGCCACCTACGAAGAGCTGGCGGACTTCCACAAA
TCAGATTACCTCGATTTCCTACAGCAAGTCGTCCCCGGCGATATGGAGAA
TCCTGAACAGAGCGAGAACATCGCGCGCTTCAACTTCGGTGACGATTGCC
CCATCTTCGACGGCCTCTACAACTACTGCTCCCTCTACGCCGGCGGTACC
ATCGACGCAGCCCGAAAGCTCTGCAACAACCAGTCGGAGATCGCAGTCAA
CTGGTCTGGTGGCCTACATCACGCCAAAAAAGCCGAAGCCAGCGGTTTCT
GCTACATCAACGACATCGTCCTCGGCATCCTGCAGCTCCTCCGCCTGCAC
CCGCGCGTCATGTACATCGACATCGACGTCCACCACGGCGACGGCGTGGA
ACAAGCCTTCTGGTCCACCGACCGCGTCCTCACCGTCTCCTTCCACAAAT
ACGACAAGGACAACTTCTTCCCCGGCACCGGTGGCCTCGACAGCACGGGG
CCCACCCATCCCCTCAACCCGGGCGCCCACCACTCCGTCAACGTCCCCCT
CCACGACGGCATCGACGACGAATCCTACATCCAACTCTTCCGCGACGTCG
TCGGCTCCTGCGTCGAAGTCTACCGACCGGGCGCCATCGTCCTCCAATGC
GGTGCCGACTCCCTCGGCTGCGACCGTCTCGGCTGCTTCAACCTGAACGT
CGCCGCCCACGGCGCCTGCGTCGCCTTCGTCAAAACTTTTAACCTCCCTC
TCCTCGTCGTCGGTGGCGGTGGCTACACCCCACGCAACGTCTCCCGCGCC
TGGGCTCACGAAACCTCCATCCTCATCGACGCCCAGGATACCATCGACCC
TCACATCCCCGAAACCGTCACCTTCCGCAACCACTTCGGCCCTGACTTCT
CTCTCTTCCCGCCCCTCTCGGAAATGCGCAAGCTCGAAAACAAGAACCCT
CGCACTTATCTCGCCGGCTTGCTCCAGTCCATCCGCGAACAGCTTCGATA
CATCCAAGGTGCCCCGAGCGTGCAAATGAGCTTCATTCCTCCGGATATTC
TCGGTCTTCGCGAAGACACGGAGAAGGAAATCGAAGAAGAGACAGCCATG
ATGGAGGAGGAGCGCGAGGAACGATCTGGTGGTGGTAGTTTAGGGAAGTC
GAGTCGACGGAGGGATTTGGAGAGAGGTGCTGGGCAGCGGGGGGAGCTGT
TTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016575histone deacetylation
Vocabulary: Molecular Function
TermDefinition
GO:0004407histone deacetylase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_3035CAN33_3035Aspergillus niger FDAARGOS_311gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3035-T1.cdsCAN33_3035-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3035-T1.exon1CAN33_3035-T1.exon1Aspergillus niger FDAARGOS_311exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3035-T1CAN33_3035-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR023696
DBxrefInterPro:IPR037138
DBxrefInterPro:IPR023801
DBxrefInterPro:IPR003084
DBxrefInterPro:IPR000286
DBxrefPFAM:PF00850
ProductHistone deacetylase domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:1892953..1894407 -
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