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CAN33_30520-T1, CAN33_30520-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_30520-T1
Unique NameCAN33_30520-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000003.1:511133..512309+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_30520-T1 ID=CAN33_30520-T1|Name=CAN33_30520-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1177bp|location=Sequence derived from alignment at NKJJ01000003.1:511133..512309+ (Aspergillus niger FDAARGOS_311)
ATGTACCGCCAGTCGTTCGCTCCACCCCCAGCGCAGTCCCCTCCCCTTCA
CCATCCTGTGCCTCAGCATGTCTCGACCGTCCCCATGATGCGCTCGCCGC
CGCCTCCGGCATCACAACAGCCTCAGACTTCTGGCTATGGCAACCCATAC
CAGCCCGCCCCTGCGCAGGGTGGCAGCGGAACCTATGCTCCTGGCTTCGG
GGGGTTCATCAATGATCCCACCGCGCAGATGGGATTCCAGGTCGGAAAGA
CCGCCATGGCAGCTGGACAGGAATATATGGAGCAGAACGTAAGCAGCAGC
TTCAAGGATGTCTCTAAGATGAAAGATGCTAACCAGGCATGAAGTTCAAT
CGCTATGTCTCTATACCAGCTCTAAAGCACTATTTCAACGTCTCGAATTC
TTACGTCCTGAACAAATTGTCCCTCGTTCTCTTCCCTTGGCGGCACAAAC
CCTGGTCCCGTCAACAGGCGCGTCTTACAACAGCTTCAACTGGTCCCAAT
GGCCAGATATCCCAGCAGCAGTACTCTTCCATGTTCCTCCCTCCGCGCGA
TGATCTCAACTCTCCAGACATGTATATCCCCGTCATGGCACTTGTCACAT
ACATCCTTCTCTCAGCGATGTTGGCCGGATTCCGCGGTAACTTCCATCCG
GAGCTGCTTGGTTCAATTACTACTACTGCTATCGCTGTCATACTGTTCGA
GATAATGTGCTTGAAGCTGGCCATGTACATCCTCAGCATCAACAACGAGT
CACAGCTGCTGGATTTGGTAGCATATTCGGGATACAAGTTTGTCGGCATC
ATCGTCACTTTGTTGACATCTGAGATCCTCACTCCGGGCCGAGGAACCGG
CGGCTGGGTTGGCTGGGTCGTCTTCATTTACACCTTCCTTGCTAATGCCT
TCTTTCTGGTACGTTCATGGCCATGTGCTTTTTTGATGACTGTACTAATG
GTGCCTCATAGCTCCGTTCTCTGAAATACGTTCTGCTCCCGGACTCCACA
AGTGATGCATCCATGCGCACTGGTTCTATGCACACGGTTGCTCGCTCGCA
GCGTAACCGTCGCACCCAGTTCCTGTTCATCTACTCGTACGTTATCCAGT
TCGTGTTCATGTGGGTTTTGAGTCGGGAGGGGCCGATGTCTATGGCTTCT
AGTGGTGGAGCAACTGGTTCAGCATAG
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Coding sequence (CDS) from alignment at NKJJ01000003.1:511133..512309+

>CAN33_30520-T1 ID=CAN33_30520-T1|Name=CAN33_30520-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3204bp|location=Sequence derived from alignment at NKJJ01000003.1:511133..512309+ (Aspergillus niger FDAARGOS_311)
ATGTACCGCCAGTCGTTCGCTCCACCCCCAGCGCAGTCCCCTCCCCTTCA
CCATCCTGTGCCTCAGCATGTCTCGACCGTCCCCATGATGCGCTCGCCGC
CGCCTCCGGCATCACAACAGCCTCAGACTTCTGGCTATGGCAACCCATAC
CAGCCCGCCCCTGCGCAGGGTGGCAGCGGAACCTATGCTCCTGGCTTCGG
GGGGTTCATCAATGATCCCACCGCGCAGATGGGATTCCAGGTCGGAAAGA
CCGCCATGGCAGCTGGACAGGAATATATGGAGCAGAACTTCAATCGCTAT
GTCTCTATACCAGCTCTAAAGCACTATTTCAACGTCTCGAATTCTTACGT
CCTGAACAAATTGTCCCTCGTTCTCTTCCCTTGGCGGCACAAACCCTGGT
CCCGTCAACAGGCGCGTCTTACAACAGCTTCAACTGGTCCCAATGGCCAG
ATATCCCAGCAGCAGTACTCTTCCATGTTCCTCCCTCCGCGCGATGATCT
CAACTCTCCAGACATGTATATCCCCGTCATGGCACTTGTCACATACATCC
TTCTCTCAGCGATGTTGGCCGGATTCCGCGGTAACTTCCATCCGGAGCTG
CTTGGTTCAATTACTACTACTGCTATCGCTGTCATACTGTTCGAGATAAT
GTGCTTGAAGCTGGCCATGTACATCCTCAGCATCAACAACGAGTCACAGC
TGCTGGATTTGGTAGCATATTCGGGATACAAGTTTGTCGGCATCATCGTC
ACTTTGTTGACATCTGAGATCCTCACTCCGGGCCGAGGAACCGGCGGCTG
GGTTGGCTGGGTCGTCTTCATTTACACCTTCCTTGCTAATGCCTTCTTTC
TGCTCCGTTCTCTGAAATACGTTCTGCTCCCGGACTCCACAAGTGATGCA
TCCATGCGCACTGGTTCTATGCACACGGTTGCTCGCTCGCAGCGTAACCG
TCGCACCCAGTTCCTGTTCATCTACTCGTACGTTATCCAGTTCGTGTTCA
TGTGGGTTTTGAGTCGGGAGGGGCCGATGTCTATGGCTTCTAGTGGTGGA
GCAACTGGTTCAGCATAGATGTACCGCCAGTCGTTCGCTCCACCCCCAGC
GCAGTCCCCTCCCCTTCACCATCCTGTGCCTCAGCATGTCTCGACCGTCC
CCATGATGCGCTCGCCGCCGCCTCCGGCATCACAACAGCCTCAGACTTCT
GGCTATGGCAACCCATACCAGCCCGCCCCTGCGCAGGGTGGCAGCGGAAC
CTATGCTCCTGGCTTCGGGGGGTTCATCAATGATCCCACCGCGCAGATGG
GATTCCAGGTCGGAAAGACCGCCATGGCAGCTGGACAGGAATATATGGAG
CAGAACTTCAATCGCTATGTCTCTATACCAGCTCTAAAGCACTATTTCAA
CGTCTCGAATTCTTACGTCCTGAACAAATTGTCCCTCGTTCTCTTCCCTT
GGCGGCACAAACCCTGGTCCCGTCAACAGGCGCGTCTTACAACAGCTTCA
ACTGGTCCCAATGGCCAGATATCCCAGCAGCAGTACTCTTCCATGTTCCT
CCCTCCGCGCGATGATCTCAACTCTCCAGACATGTATATCCCCGTCATGG
CACTTGTCACATACATCCTTCTCTCAGCGATGTTGGCCGGATTCCGCGGT
AACTTCCATCCGGAGCTGCTTGGTTCAATTACTACTACTGCTATCGCTGT
CATACTGTTCGAGATAATGTGCTTGAAGCTGGCCATGTACATCCTCAGCA
TCAACAACGAGTCACAGCTGCTGGATTTGGTAGCATATTCGGGATACAAG
TTTGTCGGCATCATCGTCACTTTGTTGACATCTGAGATCCTCACTCCGGG
CCGAGGAACCGGCGGCTGGGTTGGCTGGGTCGTCTTCATTTACACCTTCC
TTGCTAATGCCTTCTTTCTGCTCCGTTCTCTGAAATACGTTCTGCTCCCG
GACTCCACAAGTGATGCATCCATGCGCACTGGTTCTATGCACACGGTTGC
TCGCTCGCAGCGTAACCGTCGCACCCAGTTCCTGTTCATCTACTCGTACG
TTATCCAGTTCGTGTTCATGTGGGTTTTGAGTCGGGAGGGGCCGATGTCT
ATGGCTTCTAGTGGTGGAGCAACTGGTTCAGCATAGATGTACCGCCAGTC
GTTCGCTCCACCCCCAGCGCAGTCCCCTCCCCTTCACCATCCTGTGCCTC
AGCATGTCTCGACCGTCCCCATGATGCGCTCGCCGCCGCCTCCGGCATCA
CAACAGCCTCAGACTTCTGGCTATGGCAACCCATACCAGCCCGCCCCTGC
GCAGGGTGGCAGCGGAACCTATGCTCCTGGCTTCGGGGGGTTCATCAATG
ATCCCACCGCGCAGATGGGATTCCAGGTCGGAAAGACCGCCATGGCAGCT
GGACAGGAATATATGGAGCAGAACTTCAATCGCTATGTCTCTATACCAGC
TCTAAAGCACTATTTCAACGTCTCGAATTCTTACGTCCTGAACAAATTGT
CCCTCGTTCTCTTCCCTTGGCGGCACAAACCCTGGTCCCGTCAACAGGCG
CGTCTTACAACAGCTTCAACTGGTCCCAATGGCCAGATATCCCAGCAGCA
GTACTCTTCCATGTTCCTCCCTCCGCGCGATGATCTCAACTCTCCAGACA
TGTATATCCCCGTCATGGCACTTGTCACATACATCCTTCTCTCAGCGATG
TTGGCCGGATTCCGCGGTAACTTCCATCCGGAGCTGCTTGGTTCAATTAC
TACTACTGCTATCGCTGTCATACTGTTCGAGATAATGTGCTTGAAGCTGG
CCATGTACATCCTCAGCATCAACAACGAGTCACAGCTGCTGGATTTGGTA
GCATATTCGGGATACAAGTTTGTCGGCATCATCGTCACTTTGTTGACATC
TGAGATCCTCACTCCGGGCCGAGGAACCGGCGGCTGGGTTGGCTGGGTCG
TCTTCATTTACACCTTCCTTGCTAATGCCTTCTTTCTGCTCCGTTCTCTG
AAATACGTTCTGCTCCCGGACTCCACAAGTGATGCATCCATGCGCACTGG
TTCTATGCACACGGTTGCTCGCTCGCAGCGTAACCGTCGCACCCAGTTCC
TGTTCATCTACTCGTACGTTATCCAGTTCGTGTTCATGTGGGTTTTGAGT
CGGGAGGGGCCGATGTCTATGGCTTCTAGTGGTGGAGCAACTGGTTCAGC
ATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005789endoplasmic reticulum membrane
Vocabulary: Biological Process
TermDefinition
GO:0006888endoplasmic reticulum to Golgi vesicle-mediated transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_30520CAN33_30520Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_30520-T1.exon1CAN33_30520-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_30520-T1.exon2CAN33_30520-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_30520-T1.exon3CAN33_30520-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_30520-T1.cdsCAN33_30520-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_30520-T1CAN33_30520-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264P74
DBxrefInterPro:IPR005578
DBxrefPFAM:PF03878
ProductYIF1 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000003.1supercontigNKJJ01000003.1:511133..512309 +
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