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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000003.1:1126423..1127248- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_31510-T1 ID=CAN33_31510-T1|Name=CAN33_31510-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=826bp|location=Sequence derived from alignment at NKJJ01000003.1:1126423..1127248- (Aspergillus niger FDAARGOS_311)
ATGGTGTCTTTCCTTGGCCAAGCACGCCTAGCCGTGCCAATCCTGTCAGC
TTTTGCGTGCATGCTTGCGGCAAGTTCCGCGATCCCCCCACCACCGCGTG
GAGCTCTTTCACCCGAACGTCTGCAATGGATTAGAGAGGTGATCGGCAAT
CAGACTGAGAACGACAGCGTTTCGGACCTTGCTAAGCGGAGCACTGTCCT
GTCTACCAGCCAAGACGGAGTTGACAGCGCCGGATTCTACTACTCAGTGT
ACAATGACAACGGGGCCGATGTCGGATACACCGAATACCCCACGACCGGC
CAGTTCGAACTTGGCTGGAGTGCTGAGGCGGAATTCCTCGCTGGAAAGGG
CTTCAAGGGCGGCAACCCACGGTAAGTAGCCCTTCACCGGGCAGAGCCCA
AGAAGGCTGACAATTTTCCGGCTCAGCTCCTTGACCTGGGACGGTTATTT
TACCGCCGAAGGGGACTGGACTTTGGCCATTTATGGCTGGACCACGAACC
CCGTCACCGAGTGGTATATTGTGGAGACGCATGGAACTGGAACCCCAGGC
AACGGGGACATCCTCGGCCAGGTTGATAGTGATGGCGGCGTCTACGATGT
CTATAATCTTCCCTATAGGAATGTTCCGGAGATCTACGGTGTCACCAACT
TCGACCAGTACTGGTCGGTGCGTCGCACCCACCGCACCACCGGCACCGTC
GACGTGAGCGCCCATTTCCAGGGCTGGAAAAACTTGGGTCTCAACCCTGG
CTCCCCAGTCTTTCAGATGGTTACTCTGGAAGGATTTTCCGGCCAGGGGT
ACCTGGACTTCACCGTTAGTGCATAG back to topCoding sequence (CDS) from alignment at NKJJ01000003.1:1126423..1127248- >CAN33_31510-T1 ID=CAN33_31510-T1|Name=CAN33_31510-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1542bp|location=Sequence derived from alignment at NKJJ01000003.1:1126423..1127248- (Aspergillus niger FDAARGOS_311)
CTCCTTGACCTGGGACGGTTATTTTACCGCCGAAGGGGACTGGACTTTGG
CCATTTATGGCTGGACCACGAACCCCGTCACCGAGTGGTATATTGTGGAG
ACGCATGGAACTGGAACCCCAGGCAACGGGGACATCCTCGGCCAGGTTGA
TAGTGATGGCGGCGTCTACGATGTCTATAATCTTCCCTATAGGAATGTTC
CGGAGATCTACGGTGTCACCAACTTCGACCAGTACTGGTCGGTGCGTCGC
ACCCACCGCACCACCGGCACCGTCGACGTGAGCGCCCATTTCCAGGGCTG
GAAAAACTTGGGTCTCAACCCTGGCTCCCCAGTCTTTCAGATGGTTACTC
TGGAAGGATTTTCCGGCCAGGGGTACCTGGACTTCACCGTTAGTGCATAG
ATGGTGTCTTTCCTTGGCCAAGCACGCCTAGCCGTGCCAATCCTGTCAGC
TTTTGCGTGCATGCTTGCGGCAAGTTCCGCGATCCCCCCACCACCGCGTG
GAGCTCTTTCACCCGAACGTCTGCAATGGATTAGAGAGGTGATCGGCAAT
CAGACTGAGAACGACAGCGTTTCGGACCTTGCTAAGCGGAGCACTGTCCT
GTCTACCAGCCAAGACGGAGTTGACAGCGCCGGATTCTACTACTCAGTGT
ACAATGACAACGGGGCCGATGTCGGATACACCGAATACCCCACGACCGGC
CAGTTCGAACTTGGCTGGAGTGCTGAGGCGGAATTCCTCGCTGGAAAGGG
CTTCAAGGGCGGCAACCCACGCTCCTTGACCTGGGACGGTTATTTTACCG
CCGAAGGGGACTGGACTTTGGCCATTTATGGCTGGACCACGAACCCCGTC
ACCGAGTGGTATATTGTGGAGACGCATGGAACTGGAACCCCAGGCAACGG
GGACATCCTCGGCCAGGTTGATAGTGATGGCGGCGTCTACGATGTCTATA
ATCTTCCCTATAGGAATGTTCCGGAGATCTACGGTGTCACCAACTTCGAC
CAGTACTGGTCGGTGCGTCGCACCCACCGCACCACCGGCACCGTCGACGT
GAGCGCCCATTTCCAGGGCTGGAAAAACTTGGGTCTCAACCCTGGCTCCC
CAGTCTTTCAGATGGTTACTCTGGAAGGATTTTCCGGCCAGGGGTACCTG
GACTTCACCGTTAGTGCATAGATGGTGTCTTTCCTTGGCCAAGCACGCCT
AGCCGTGCCAATCCTGTCAGCTTTTGCGTGCATGCTTGCGGCAAGTTCCG
CGATCCCCCCACCACCGCGTGGAGCTCTTTCACCCGAACGTCTGCAATGG
ATTAGAGAGGTGATCGGCAATCAGACTGAGAACGACAGCGTTTCGGACCT
TGCTAAGCGGAGCACTGTCCTGTCTACCAGCCAAGACGGAGTTGACAGCG
CCGGATTCTACTACTCAGTGTACAATGACAACGGGGCCGATGTCGGATAC
ACCGAATACCCCACGACCGGCCAGTTCGAACTTGGCTGGAGTGCTGAGGC
GGAATTCCTCGCTGGAAAGGGCTTCAAGGGCGGCAACCCACG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| Note | SECRETED:SignalP(1-27) |
| Note | CAZy:GH11 |
| DBxref | InterPro:IPR013320 |
| DBxref | InterPro:IPR013319 |
| DBxref | InterPro:IPR033123 |
| DBxref | InterPro:IPR001137 |
| DBxref | PFAM:PF00457 |
| Product | Glycosyl hydrolases family 11 family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000003.1 | supercontig | NKJJ01000003.1:1126423..1127248 - |
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