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CAN33_31615-T1, CAN33_31615-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_31615-T1
Unique NameCAN33_31615-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000003.1:1177875..1179082-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_31615-T1 ID=CAN33_31615-T1|Name=CAN33_31615-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1208bp|location=Sequence derived from alignment at NKJJ01000003.1:1177875..1179082- (Aspergillus niger FDAARGOS_311)
ATGGTCCACCTGTCAACCGTCCGTAAAGAGTCCCACGCCCATCAGCGTCA
GCGCGAAGAACGCGATGCGCAGGCAGCCGCAGTGTCACCTTACGTGTACG
GGACGCGCTATGCAGTCCAAGAGCTGCCGGAGCATAGCATGTCGGAGCAT
GAGATGCCAGCCCCGGTGGCATATCGCATGATCAAGGATGAGTTGAGCTT
GGATGGGAATCCCCTGCTCAAGTAATACCTCGCTTCTCTTTCTGCTCTTT
GAGCCGTCAATAGTAACATGTACTAGTTTAGCAAGCTTTGTCACTACCTA
TATGGTAAGACTGTTTTCGAAAAACAAACCCAACACTCCCGCTAACACCA
TCACAGGAAGATGAAGTGCAACAGCTCATGTCCGACGCCATGAGCAAGAA
CTTCATCGACTACGAACAGTATCCACAGACTGCGCATATGCAGAACCGCT
GTGTCAATATGATCGCCGGTCTGTTCCATGCACCTAGTATCAATGACCCA
AGCAACGAGCAAGACGCCATCGGCACTTCGACGGTCGGATCGTCAGAAGC
GATCATGCTGGCCATGCTGGCCATGAAGAAACGCTGGCAGAACAAGCGGA
AAGAAGCTGGGAAGGACTGGTCGCGCCCGAACATCATCATGAATAGTGCG
GTACAGGTATGCTGGGAGAAAGCAGCGCGGTATTTCGAGGTCGAGGAGAG
ATATGTCTATTGCACGGAGACCCGATATGTCATTGACCCCAAGGAGGCGG
TGGATCTGGTAGACGAAAACACGGTGGGAATCTGTGCAATCCTAGGGACA
ACGTACACAGGGCAGTATGAGGATGTCAAGGCGATCAACGACCTGCTGAT
AGCGAAGAATATCGACTGCCCAATACATGTGGATGCGGCTAGTGGCGGGT
TTGTGGTGCCCTTTGTGAAACCAGAGCTGGAGTGGGACTTCCGCTTGGAA
AAAGTCATCTCCATAAATGTCTCAGGGCATAAATACGGACTGGTGAGATA
CATCATAAACCAGTACACCTCGCCGAATGCGGACACAGACTGATCGTGAC
AGGTCTATCCCGGCGTTGGTTGGGTTTTCTGGCGCGCCCCCGAATACCTT
CCCAAAGAGCTCATTTTCAACATCAATTATCTGGGCGCCGAGCAGGCCAG
CTTCACGTTGAACTTTTCCAAAGGCGCCCCCACGTCATCGGGCAATACTA
CCAACTGA
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Coding sequence (CDS) from alignment at NKJJ01000003.1:1177875..1179082-

>CAN33_31615-T1 ID=CAN33_31615-T1|Name=CAN33_31615-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4164bp|location=Sequence derived from alignment at NKJJ01000003.1:1177875..1179082- (Aspergillus niger FDAARGOS_311)
GTCTATCCCGGCGTTGGTTGGGTTTTCTGGCGCGCCCCCGAATACCTTCC
CAAAGAGCTCATTTTCAACATCAATTATCTGGGCGCCGAGCAGGCCAGCT
TCACGTTGAACTTTTCCAAAGGCGCCCCCACGTCATCGGGCAATACTACC
AACTGAGAAGATGAAGTGCAACAGCTCATGTCCGACGCCATGAGCAAGAA
CTTCATCGACTACGAACAGTATCCACAGACTGCGCATATGCAGAACCGCT
GTGTCAATATGATCGCCGGTCTGTTCCATGCACCTAGTATCAATGACCCA
AGCAACGAGCAAGACGCCATCGGCACTTCGACGGTCGGATCGTCAGAAGC
GATCATGCTGGCCATGCTGGCCATGAAGAAACGCTGGCAGAACAAGCGGA
AAGAAGCTGGGAAGGACTGGTCGCGCCCGAACATCATCATGAATAGTGCG
GTACAGGTATGCTGGGAGAAAGCAGCGCGGTATTTCGAGGTCGAGGAGAG
ATATGTCTATTGCACGGAGACCCGATATGTCATTGACCCCAAGGAGGCGG
TGGATCTGGTAGACGAAAACACGGTGGGAATCTGTGCAATCCTAGGGACA
ACGTACACAGGGCAGTATGAGGATGTCAAGGCGATCAACGACCTGCTGAT
AGCGAAGAATATCGACTGCCCAATACATGTGGATGCGGCTAGTGGCGGGT
TTGTGGTGCCCTTTGTGAAACCAGAGCTGGAGTGGGACTTCCGCTTGGAA
AAAGTCATCTCCATAAATGTCTCAGGGCATAAATACGGACTGTTTAGCAA
GCTTTGTCACTACCTATATGATGGTCCACCTGTCAACCGTCCGTAAAGAG
TCCCACGCCCATCAGCGTCAGCGCGAAGAACGCGATGCGCAGGCAGCCGC
AGTGTCACCTTACGTGTACGGGACGCGCTATGCAGTCCAAGAGCTGCCGG
AGCATAGCATGTCGGAGCATGAGATGCCAGCCCCGGTGGCATATCGCATG
ATCAAGGATGAGTTGAGCTTGGATGGGAATCCCCTGCTCAAGTCTATCCC
GGCGTTGGTTGGGTTTTCTGGCGCGCCCCCGAATACCTTCCCAAAGAGCT
CATTTTCAACATCAATTATCTGGGCGCCGAGCAGGCCAGCTTCACGTTGA
ACTTTTCCAAAGGCGCCCCCACGTCATCGGGCAATACTACCAACTGAGAA
GATGAAGTGCAACAGCTCATGTCCGACGCCATGAGCAAGAACTTCATCGA
CTACGAACAGTATCCACAGACTGCGCATATGCAGAACCGCTGTGTCAATA
TGATCGCCGGTCTGTTCCATGCACCTAGTATCAATGACCCAAGCAACGAG
CAAGACGCCATCGGCACTTCGACGGTCGGATCGTCAGAAGCGATCATGCT
GGCCATGCTGGCCATGAAGAAACGCTGGCAGAACAAGCGGAAAGAAGCTG
GGAAGGACTGGTCGCGCCCGAACATCATCATGAATAGTGCGGTACAGGTA
TGCTGGGAGAAAGCAGCGCGGTATTTCGAGGTCGAGGAGAGATATGTCTA
TTGCACGGAGACCCGATATGTCATTGACCCCAAGGAGGCGGTGGATCTGG
TAGACGAAAACACGGTGGGAATCTGTGCAATCCTAGGGACAACGTACACA
GGGCAGTATGAGGATGTCAAGGCGATCAACGACCTGCTGATAGCGAAGAA
TATCGACTGCCCAATACATGTGGATGCGGCTAGTGGCGGGTTTGTGGTGC
CCTTTGTGAAACCAGAGCTGGAGTGGGACTTCCGCTTGGAAAAAGTCATC
TCCATAAATGTCTCAGGGCATAAATACGGACTGTTTAGCAAGCTTTGTCA
CTACCTATATGATGGTCCACCTGTCAACCGTCCGTAAAGAGTCCCACGCC
CATCAGCGTCAGCGCGAAGAACGCGATGCGCAGGCAGCCGCAGTGTCACC
TTACGTGTACGGGACGCGCTATGCAGTCCAAGAGCTGCCGGAGCATAGCA
TGTCGGAGCATGAGATGCCAGCCCCGGTGGCATATCGCATGATCAAGGAT
GAGTTGAGCTTGGATGGGAATCCCCTGCTCAAGTCTATCCCGGCGTTGGT
TGGGTTTTCTGGCGCGCCCCCGAATACCTTCCCAAAGAGCTCATTTTCAA
CATCAATTATCTGGGCGCCGAGCAGGCCAGCTTCACGTTGAACTTTTCCA
AAGGCGCCCCCACGTCATCGGGCAATACTACCAACTGAGAAGATGAAGTG
CAACAGCTCATGTCCGACGCCATGAGCAAGAACTTCATCGACTACGAACA
GTATCCACAGACTGCGCATATGCAGAACCGCTGTGTCAATATGATCGCCG
GTCTGTTCCATGCACCTAGTATCAATGACCCAAGCAACGAGCAAGACGCC
ATCGGCACTTCGACGGTCGGATCGTCAGAAGCGATCATGCTGGCCATGCT
GGCCATGAAGAAACGCTGGCAGAACAAGCGGAAAGAAGCTGGGAAGGACT
GGTCGCGCCCGAACATCATCATGAATAGTGCGGTACAGGTATGCTGGGAG
AAAGCAGCGCGGTATTTCGAGGTCGAGGAGAGATATGTCTATTGCACGGA
GACCCGATATGTCATTGACCCCAAGGAGGCGGTGGATCTGGTAGACGAAA
ACACGGTGGGAATCTGTGCAATCCTAGGGACAACGTACACAGGGCAGTAT
GAGGATGTCAAGGCGATCAACGACCTGCTGATAGCGAAGAATATCGACTG
CCCAATACATGTGGATGCGGCTAGTGGCGGGTTTGTGGTGCCCTTTGTGA
AACCAGAGCTGGAGTGGGACTTCCGCTTGGAAAAAGTCATCTCCATAAAT
GTCTCAGGGCATAAATACGGACTGTTTAGCAAGCTTTGTCACTACCTATA
TGATGGTCCACCTGTCAACCGTCCGTAAAGAGTCCCACGCCCATCAGCGT
CAGCGCGAAGAACGCGATGCGCAGGCAGCCGCAGTGTCACCTTACGTGTA
CGGGACGCGCTATGCAGTCCAAGAGCTGCCGGAGCATAGCATGTCGGAGC
ATGAGATGCCAGCCCCGGTGGCATATCGCATGATCAAGGATGAGTTGAGC
TTGGATGGGAATCCCCTGCTCAAGTCTATCCCGGCGTTGGTTGGGTTTTC
TGGCGCGCCCCCGAATACCTTCCCAAAGAGCTCATTTTCAACATCAATTA
TCTGGGCGCCGAGCAGGCCAGCTTCACGTTGAACTTTTCCAAAGGCGCCC
CCACGTCATCGGGCAATACTACCAACTGAGAAGATGAAGTGCAACAGCTC
ATGTCCGACGCCATGAGCAAGAACTTCATCGACTACGAACAGTATCCACA
GACTGCGCATATGCAGAACCGCTGTGTCAATATGATCGCCGGTCTGTTCC
ATGCACCTAGTATCAATGACCCAAGCAACGAGCAAGACGCCATCGGCACT
TCGACGGTCGGATCGTCAGAAGCGATCATGCTGGCCATGCTGGCCATGAA
GAAACGCTGGCAGAACAAGCGGAAAGAAGCTGGGAAGGACTGGTCGCGCC
CGAACATCATCATGAATAGTGCGGTACAGGTATGCTGGGAGAAAGCAGCG
CGGTATTTCGAGGTCGAGGAGAGATATGTCTATTGCACGGAGACCCGATA
TGTCATTGACCCCAAGGAGGCGGTGGATCTGGTAGACGAAAACACGGTGG
GAATCTGTGCAATCCTAGGGACAACGTACACAGGGCAGTATGAGGATGTC
AAGGCGATCAACGACCTGCTGATAGCGAAGAATATCGACTGCCCAATACA
TGTGGATGCGGCTAGTGGCGGGTTTGTGGTGCCCTTTGTGAAACCAGAGC
TGGAGTGGGACTTCCGCTTGGAAAAAGTCATCTCCATAAATGTCTCAGGG
CATAAATACGGACTGTTTAGCAAGCTTTGTCACTACCTATATGATGGTCC
ACCTGTCAACCGTCCGTAAAGAGTCCCACGCCCATCAGCGTCAGCGCGAA
GAACGCGATGCGCAGGCAGCCGCAGTGTCACCTTACGTGTACGGGACGCG
CTATGCAGTCCAAGAGCTGCCGGAGCATAGCATGTCGGAGCATGAGATGC
CAGCCCCGGTGGCATATCGCATGATCAAGGATGAGTTGAGCTTGGATGGG
AATCCCCTGCTCAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0019752carboxylic acid metabolic process
GO:0006536glutamate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016831carboxy-lyase activity
GO:0003824catalytic activity
GO:0004351glutamate decarboxylase activity
GO:0030170pyridoxal phosphate binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_31615CAN33_31615Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_31615-T1CAN33_31615-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_31615-T1.cdsCAN33_31615-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_31615-T1.exon4CAN33_31615-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_31615-T1.exon3CAN33_31615-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_31615-T1.exon2CAN33_31615-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_31615-T1.exon1CAN33_31615-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR015424
DBxrefInterPro:IPR002129
DBxrefInterPro:IPR015421
DBxrefInterPro:IPR010107
DBxrefPFAM:PF00282
Productglutamate decarboxylase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000003.1supercontigNKJJ01000003.1:1177875..1179082 -
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