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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000003.1:1396030..1396985+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_31970-T1 ID=CAN33_31970-T1|Name=CAN33_31970-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=956bp|location=Sequence derived from alignment at NKJJ01000003.1:1396030..1396985+ (Aspergillus niger FDAARGOS_311)
ATGGCATCCACCTCCGGGGTAGGGTCGTATTCGAACCCTCTGAAGAAATT
CAAGTATGTCCCGCCTGCAGCATAGCTAGCTTTCGGCTTTCCTTAATGTG
CGGCTAATCGAATTGCAGGCTGGTTTTCTTGGGCGAGCAGAGTGGTACGG
ATATCTTCTGCGACGAGACTCCAATCATTGGCGCCACCCGGTCTCTGACA
TCTGCCTTACAGTTGGAAAAACCTCATTGATCACACGGTTCATGTACGAT
TCATTCGACAACACGTACCAAGCTACCATTGGAATCGATTTCTTGTCAAA
GGTATACTACGCCTAGTCGACTGCTTGTGCCCTGCATTAGCAGGCCCTCA
CCGAGCCATTCTCACACGGTCTCATGCTTTCCAATATGCTCGCGCTGCTG
CAAAAAGCTAATTTGCATCGCTCGTCTTAGACTATGTACCTGGAAGACAG
AACTGTGCGCCTTCAACTTTGGGACACAGCTGGTCAAGAACGTTTCCGAT
CTTTGATTCCTTCCTACATCCGTGACTCCAGTGTCGCTGTGGTGGTCTAC
GATATCTCCAACGCCAAGTCTTTCCAGAACACACGCAAATGGATCGATGA
TGTACGTGGGGAACGCGGTAACGATGTCATCATCGTCCTGGTGGGCAACA
AGACCGATCTGAACGACAAGCGCGAGGTCACGACGGCGCAGGGCGAGGAG
GAGGCGAAGAAGAACGGCTTGATGTTCATTGAGACCAGTGCTAAAGTCGG
CCACAATGTGAAACAGCTTTTCAGGAGAATTGCGCAAGCCCTACCGGGCA
TGGAGGGTGAAGCCAACCGGGGAGACAACCAGAGTACGTTATCCTTTCCC
CGCCCATGGCTCGAGTTACACGGGATGAGTACTGACAACTCTTACAGTGA
TCGATGTCAACATTACCCCGAAAGAGACCACGACCAACGACGGATGCGCC
TGCTAG back to topCoding sequence (CDS) from alignment at NKJJ01000003.1:1396030..1396985+ >CAN33_31970-T1 ID=CAN33_31970-T1|Name=CAN33_31970-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3150bp|location=Sequence derived from alignment at NKJJ01000003.1:1396030..1396985+ (Aspergillus niger FDAARGOS_311)
ATGGCATCCACCTCCGGGGTAGGGTCGTATTCGAACCCTCTGAAGAAATT
CAAGCTGGTTTTCTTGGGCGAGCAGAGTGTTGGAAAAACCTCATTGATCA
CACGGTTCATGTACGATTCATTCGACAACACGTACCAAGCTACCATTGGA
ATCGATTTCTTGTCAAAGACTATGTACCTGGAAGACAGAACTGTGCGCCT
TCAACTTTGGGACACAGCTGGTCAAGAACGTTTCCGATCTTTGATTCCTT
CCTACATCCGTGACTCCAGTGTCGCTGTGGTGGTCTACGATATCTCCAAC
GCCAAGTCTTTCCAGAACACACGCAAATGGATCGATGATGTACGTGGGGA
ACGCGGTAACGATGTCATCATCGTCCTGGTGGGCAACAAGACCGATCTGA
ACGACAAGCGCGAGGTCACGACGGCGCAGGGCGAGGAGGAGGCGAAGAAG
AACGGCTTGATGTTCATTGAGACCAGTGCTAAAGTCGGCCACAATGTGAA
ACAGCTTTTCAGGAGAATTGCGCAAGCCCTACCGGGCATGGAGGGTGAAG
CCAACCGGGGAGACAACCAGATGATCGATGTCAACATTACCCCGAAAGAG
ACCACGACCAACGACGGATGCGCCTGCTAGATGGCATCCACCTCCGGGGT
AGGGTCGTATTCGAACCCTCTGAAGAAATTCAAGCTGGTTTTCTTGGGCG
AGCAGAGTGTTGGAAAAACCTCATTGATCACACGGTTCATGTACGATTCA
TTCGACAACACGTACCAAGCTACCATTGGAATCGATTTCTTGTCAAAGAC
TATGTACCTGGAAGACAGAACTGTGCGCCTTCAACTTTGGGACACAGCTG
GTCAAGAACGTTTCCGATCTTTGATTCCTTCCTACATCCGTGACTCCAGT
GTCGCTGTGGTGGTCTACGATATCTCCAACGCCAAGTCTTTCCAGAACAC
ACGCAAATGGATCGATGATGTACGTGGGGAACGCGGTAACGATGTCATCA
TCGTCCTGGTGGGCAACAAGACCGATCTGAACGACAAGCGCGAGGTCACG
ACGGCGCAGGGCGAGGAGGAGGCGAAGAAGAACGGCTTGATGTTCATTGA
GACCAGTGCTAAAGTCGGCCACAATGTGAAACAGCTTTTCAGGAGAATTG
CGCAAGCCCTACCGGGCATGGAGGGTGAAGCCAACCGGGGAGACAACCAG
ATGATCGATGTCAACATTACCCCGAAAGAGACCACGACCAACGACGGATG
CGCCTGCTAGATGGCATCCACCTCCGGGGTAGGGTCGTATTCGAACCCTC
TGAAGAAATTCAAGCTGGTTTTCTTGGGCGAGCAGAGTGTTGGAAAAACC
TCATTGATCACACGGTTCATGTACGATTCATTCGACAACACGTACCAAGC
TACCATTGGAATCGATTTCTTGTCAAAGACTATGTACCTGGAAGACAGAA
CTGTGCGCCTTCAACTTTGGGACACAGCTGGTCAAGAACGTTTCCGATCT
TTGATTCCTTCCTACATCCGTGACTCCAGTGTCGCTGTGGTGGTCTACGA
TATCTCCAACGCCAAGTCTTTCCAGAACACACGCAAATGGATCGATGATG
TACGTGGGGAACGCGGTAACGATGTCATCATCGTCCTGGTGGGCAACAAG
ACCGATCTGAACGACAAGCGCGAGGTCACGACGGCGCAGGGCGAGGAGGA
GGCGAAGAAGAACGGCTTGATGTTCATTGAGACCAGTGCTAAAGTCGGCC
ACAATGTGAAACAGCTTTTCAGGAGAATTGCGCAAGCCCTACCGGGCATG
GAGGGTGAAGCCAACCGGGGAGACAACCAGATGATCGATGTCAACATTAC
CCCGAAAGAGACCACGACCAACGACGGATGCGCCTGCTAGATGGCATCCA
CCTCCGGGGTAGGGTCGTATTCGAACCCTCTGAAGAAATTCAAGCTGGTT
TTCTTGGGCGAGCAGAGTGTTGGAAAAACCTCATTGATCACACGGTTCAT
GTACGATTCATTCGACAACACGTACCAAGCTACCATTGGAATCGATTTCT
TGTCAAAGACTATGTACCTGGAAGACAGAACTGTGCGCCTTCAACTTTGG
GACACAGCTGGTCAAGAACGTTTCCGATCTTTGATTCCTTCCTACATCCG
TGACTCCAGTGTCGCTGTGGTGGTCTACGATATCTCCAACGCCAAGTCTT
TCCAGAACACACGCAAATGGATCGATGATGTACGTGGGGAACGCGGTAAC
GATGTCATCATCGTCCTGGTGGGCAACAAGACCGATCTGAACGACAAGCG
CGAGGTCACGACGGCGCAGGGCGAGGAGGAGGCGAAGAAGAACGGCTTGA
TGTTCATTGAGACCAGTGCTAAAGTCGGCCACAATGTGAAACAGCTTTTC
AGGAGAATTGCGCAAGCCCTACCGGGCATGGAGGGTGAAGCCAACCGGGG
AGACAACCAGATGATCGATGTCAACATTACCCCGAAAGAGACCACGACCA
ACGACGGATGCGCCTGCTAGATGGCATCCACCTCCGGGGTAGGGTCGTAT
TCGAACCCTCTGAAGAAATTCAAGCTGGTTTTCTTGGGCGAGCAGAGTGT
TGGAAAAACCTCATTGATCACACGGTTCATGTACGATTCATTCGACAACA
CGTACCAAGCTACCATTGGAATCGATTTCTTGTCAAAGACTATGTACCTG
GAAGACAGAACTGTGCGCCTTCAACTTTGGGACACAGCTGGTCAAGAACG
TTTCCGATCTTTGATTCCTTCCTACATCCGTGACTCCAGTGTCGCTGTGG
TGGTCTACGATATCTCCAACGCCAAGTCTTTCCAGAACACACGCAAATGG
ATCGATGATGTACGTGGGGAACGCGGTAACGATGTCATCATCGTCCTGGT
GGGCAACAAGACCGATCTGAACGACAAGCGCGAGGTCACGACGGCGCAGG
GCGAGGAGGAGGCGAAGAAGAACGGCTTGATGTTCATTGAGACCAGTGCT
AAAGTCGGCCACAATGTGAAACAGCTTTTCAGGAGAATTGCGCAAGCCCT
ACCGGGCATGGAGGGTGAAGCCAACCGGGGAGACAACCAGATGATCGATG
TCAACATTACCCCGAAAGAGACCACGACCAACGACGGATGCGCCTGCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003924 | GTPase activity |
| GO:0005525 | GTP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264JHE |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR001806 |
| DBxref | InterPro:IPR005225 |
| DBxref | PFAM:PF09439 |
| DBxref | PFAM:PF08477 |
| DBxref | PFAM:PF00071 |
| DBxref | PFAM:PF01926 |
| DBxref | PFAM:PF04670 |
| DBxref | PFAM:PF00025 |
| Product | Ras- protein Rab-6A |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000003.1 | supercontig | NKJJ01000003.1:1396030..1396985 + |
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