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CAN33_32325-T1, CAN33_32325-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_32325-T1
Unique NameCAN33_32325-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000003.1:1627083..1628167-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_32325-T1 ID=CAN33_32325-T1|Name=CAN33_32325-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1085bp|location=Sequence derived from alignment at NKJJ01000003.1:1627083..1628167- (Aspergillus niger FDAARGOS_311)
ATGCAGGCTGCCCAGCAGTCCTGGGGTACGTCCATCCCCAACCCCATCCC
CACCCCCACTCCATCTCACAGCACTCTAACCCCATAACCACAGAATTCGA
AAATGCCGTCACTCTCATAGACCCCCACCGAGACGCGCTCTACAAATACG
ATGAAGAGACACACAAAGCTCTTAGCGCTCAGCGCCCTTGGTCCAAAGAC
CCACACTACTTCAAATCGATCCGAATCTCCGCCGTCGCACTCCTCAAGAT
GGTAATGCACGCGCGGTCCGGCGGCTCCCTCGAAGTAATGGGCCTAATGC
AAGGCTATGTCCTGCCCGAAACCTTCGTGGTAACCGACGCCTTCCGACTT
CCCGTGGAGGGAACCGAAACGCGAGTCAACGCCCAAGACGAAGCCAACGA
GTACATGGTCTCATACCTACAGTCATGCCGGGACGCAGGACGGATGGAAA
ACGCAGTGGGCTGGTACCACAGTCATCCCGGGTACGGGTGCTGGTTATCG
GGCATTGATGTGACGACGCAGGATATGCAGCAGCTCGGGGGACCGTTTGT
GGCGGTGGTGGTTGATCCAGAGAGGACGATCTCAGCAGGGAAGGTGGATA
TTGGGGCATTTAGGACGTTTCCGAAGGATTATACGCCGCCGAAAGGGGAG
GGGGGTAGTGGTGCTGGGGAGGATGACTATCAGACGGTGCCGTTGAACAA
GGCGGAGGACTTTGGGGCACATGCGTCACATTATTATTCGCTGGAGGTGT
CGGTGTTTAAGAGTGCGTTGGATACGGAGATTCTGTCGTTGCTGTGGAAT
AAGTATTGGGTTGCGACGTTGAGTCAGAGTCCGTTGTTTACGACGAGGGA
TTATGGGAGTAAGCAGATGGTGGATTTGAGTCAGAAGATTAAGCGGGCTA
CGAGGGGCGTGGAGAGTAGTGCTTCGCGAGGGAATCTGGCGCAGGTTAAG
GATCCGCAGTTGGAGAGGGTGGCGAGGGACGGGCAGCGGATTGTCTCGGA
AGAAGTGAAGGGTTTGTTGGCGGCGGAAGTGAAGATGAAGCTGTTTCAAA
ATGTTGGGGAGGGGAATAGATCGGAGAAATCATGA
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Coding sequence (CDS) from alignment at NKJJ01000003.1:1627083..1628167-

>CAN33_32325-T1 ID=CAN33_32325-T1|Name=CAN33_32325-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2034bp|location=Sequence derived from alignment at NKJJ01000003.1:1627083..1628167- (Aspergillus niger FDAARGOS_311)
AATTCGAAAATGCCGTCACTCTCATAGACCCCCACCGAGACGCGCTCTAC
AAATACGATGAAGAGACACACAAAGCTCTTAGCGCTCAGCGCCCTTGGTC
CAAAGACCCACACTACTTCAAATCGATCCGAATCTCCGCCGTCGCACTCC
TCAAGATGGTAATGCACGCGCGGTCCGGCGGCTCCCTCGAAGTAATGGGC
CTAATGCAAGGCTATGTCCTGCCCGAAACCTTCGTGGTAACCGACGCCTT
CCGACTTCCCGTGGAGGGAACCGAAACGCGAGTCAACGCCCAAGACGAAG
CCAACGAGTACATGGTCTCATACCTACAGTCATGCCGGGACGCAGGACGG
ATGGAAAACGCAGTGGGCTGGTACCACAGTCATCCCGGGTACGGGTGCTG
GTTATCGGGCATTGATGTGACGACGCAGGATATGCAGCAGCTCGGGGGAC
CGTTTGTGGCGGTGGTGGTTGATCCAGAGAGGACGATCTCAGCAGGGAAG
GTGGATATTGGGGCATTTAGGACGTTTCCGAAGGATTATACGCCGCCGAA
AGGGGAGGGGGGTAGTGGTGCTGGGGAGGATGACTATCAGACGGTGCCGT
TGAACAAGGCGGAGGACTTTGGGGCACATGCGTCACATTATTATTCGCTG
GAGGTGTCGGTGTTTAAGAGTGCGTTGGATACGGAGATTCTGTCGTTGCT
GTGGAATAAGTATTGGGTTGCGACGTTGAGTCAGAGTCCGTTGTTTACGA
CGAGGGATTATGGGAGTAAGCAGATGGTGGATTTGAGTCAGAAGATTAAG
CGGGCTACGAGGGGCGTGGAGAGTAGTGCTTCGCGAGGGAATCTGGCGCA
GGTTAAGGATCCGCAGTTGGAGAGGGTGGCGAGGGACGGGCAGCGGATTG
TCTCGGAAGAAGTGAAGGGTTTGTTGGCGGCGGAAGTGAAGATGAAGCTG
TTTCAAAATGTTGGGGAGGGGAATAGATCGGAGAAATCATGAATGCAGGC
TGCCCAGCAGTCCTGGGAATTCGAAAATGCCGTCACTCTCATAGACCCCC
ACCGAGACGCGCTCTACAAATACGATGAAGAGACACACAAAGCTCTTAGC
GCTCAGCGCCCTTGGTCCAAAGACCCACACTACTTCAAATCGATCCGAAT
CTCCGCCGTCGCACTCCTCAAGATGGTAATGCACGCGCGGTCCGGCGGCT
CCCTCGAAGTAATGGGCCTAATGCAAGGCTATGTCCTGCCCGAAACCTTC
GTGGTAACCGACGCCTTCCGACTTCCCGTGGAGGGAACCGAAACGCGAGT
CAACGCCCAAGACGAAGCCAACGAGTACATGGTCTCATACCTACAGTCAT
GCCGGGACGCAGGACGGATGGAAAACGCAGTGGGCTGGTACCACAGTCAT
CCCGGGTACGGGTGCTGGTTATCGGGCATTGATGTGACGACGCAGGATAT
GCAGCAGCTCGGGGGACCGTTTGTGGCGGTGGTGGTTGATCCAGAGAGGA
CGATCTCAGCAGGGAAGGTGGATATTGGGGCATTTAGGACGTTTCCGAAG
GATTATACGCCGCCGAAAGGGGAGGGGGGTAGTGGTGCTGGGGAGGATGA
CTATCAGACGGTGCCGTTGAACAAGGCGGAGGACTTTGGGGCACATGCGT
CACATTATTATTCGCTGGAGGTGTCGGTGTTTAAGAGTGCGTTGGATACG
GAGATTCTGTCGTTGCTGTGGAATAAGTATTGGGTTGCGACGTTGAGTCA
GAGTCCGTTGTTTACGACGAGGGATTATGGGAGTAAGCAGATGGTGGATT
TGAGTCAGAAGATTAAGCGGGCTACGAGGGGCGTGGAGAGTAGTGCTTCG
CGAGGGAATCTGGCGCAGGTTAAGGATCCGCAGTTGGAGAGGGTGGCGAG
GGACGGGCAGCGGATTGTCTCGGAAGAAGTGAAGGGTTTGTTGGCGGCGG
AAGTGAAGATGAAGCTGTTTCAAAATGTTGGGGAGGGGAATAGATCGGAG
AAATCATGAATGCAGGCTGCCCAGCAGTCCTGGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CSN5CAN33_32325Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_32325-T1CAN33_32325-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_32325-T1.cdsCAN33_32325-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_32325-T1.exon2CAN33_32325-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_32325-T1.exon1CAN33_32325-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09263RDD
NoteMEROPS:MER0122119
DBxrefInterPro:IPR037518
DBxrefInterPro:IPR040961
DBxrefInterPro:IPR000555
DBxrefPFAM:PF01398
DBxrefPFAM:PF18323
Productproteasome regulatory particle subunit RPN11
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000003.1supercontigNKJJ01000003.1:1627083..1628167 -
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