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CAN33_32505-T1, CAN33_32505-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_32505-T1
Unique NameCAN33_32505-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000003.1:1744735..1746001+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_32505-T1 ID=CAN33_32505-T1|Name=CAN33_32505-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1267bp|location=Sequence derived from alignment at NKJJ01000003.1:1744735..1746001+ (Aspergillus niger FDAARGOS_311)
ATGTCCGCTCACGGATCCTCCACCAGGGTGCCCTGCACCTACAAGGACTG
CAGCGGTGTCTTTGGTTCGGAGTGGGACATGAAGAGGCACAAGGTGAACG
AACACGACTACTGCAAGCGTTGCGACGAAGACTTCCAGGATGATGAGTAT
CTACTGCTCCACAAGATCAAGAGTGACAAGCATATCGTGTGTGTGGTGTG
TGGGATCGATTTCCGCAGCGAGGGTGGTAGAGACCTCCACACTCGCCAGG
TTAGTATCATTCATTACCACAAATATTTACCATCCACATTATATTCAAGC
TAATACTTTTGGTGTCTATACAGCAACACCGAACTCCGCAGAGCCTGATC
TGTTACGGCTGCGGGCAGAGGTTCAGACAGGCAGGTGCCATGGTAAATCA
CGTTGAGAGCGGCGATTGCCCAAACATCCCCTTGTCTAGTCTCCTACAGG
AACAGTCAAAGAGACTCCTCTACCGGGAGACGCTCAAGACAGGAAATGAG
AATGAGAACGCTGACCCCGATTGTCCAGATGACAACGGCGGAGTCCAAAT
CGAGCAGAACCTTTTGGAGATGGACTTTGACAACGACGAGGCCACTCGAT
CTGTTGTGGACGGGGTGGGCGGTCTATCTCTTAACACCAACGTCCCAGAA
TGGAAGAGCAAGTCGTCTATGGCCTCTCCGTCTATGACGAGTGAGATGAG
AGGACGATCAGCATCGGCGGGGAAGATGCCTGCATCGGGTGCCAGGCCAT
CGAGCCCAAGCCCAAGCCCGAGCAATTCATTTGGCAATATCCGCTTCGAT
GCAGGACACACTCTGCGCATGTTGGACCAGAACTGGGACTCTACCGTATA
CTTCAGTTCCTTTTCCGGAAAGTTTATCTGTCCCTGTAAGGCTGAATTCT
CCAGCATGAAGGACTTTGAGGAGCATGTGGTAACGAAGACCAACCAGAAC
AGGAGCATTCAGTAAGCGGCTGCATGCTTGCATGACTGTTTTGTCTATGG
TCTGACTCACGGCTTATTAGGTGCCCTGGATGCCTTCGCGTCTTCAAAAC
GGCGGCTGCCCTGGTGGCTCATTGCGAGTCGGCCAGTACTCGGTGCAAGG
TGAACAAAGGGCTCCATTTCAGCCAGGTGATCAATGACATCAGTGGAGGG
CTGGTCAAGTCAGTTGGTCATTTCGAGGACGGAAGCGTTGAGTATGGTGC
TGGCACAATGGGTCCGAAGAAGGTGACTTATAAGAAAGACGAGGAGGGTC
CTAATCTGATGGACTGA
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Coding sequence (CDS) from alignment at NKJJ01000003.1:1744735..1746001+

>CAN33_32505-T1 ID=CAN33_32505-T1|Name=CAN33_32505-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3402bp|location=Sequence derived from alignment at NKJJ01000003.1:1744735..1746001+ (Aspergillus niger FDAARGOS_311)
ATGTCCGCTCACGGATCCTCCACCAGGGTGCCCTGCACCTACAAGGACTG
CAGCGGTGTCTTTGGTTCGGAGTGGGACATGAAGAGGCACAAGGTGAACG
AACACGACTACTGCAAGCGTTGCGACGAAGACTTCCAGGATGATGAGTAT
CTACTGCTCCACAAGATCAAGAGTGACAAGCATATCGTGTGTGTGGTGTG
TGGGATCGATTTCCGCAGCGAGGGTGGTAGAGACCTCCACACTCGCCAGC
AACACCGAACTCCGCAGAGCCTGATCTGTTACGGCTGCGGGCAGAGGTTC
AGACAGGCAGGTGCCATGGTAAATCACGTTGAGAGCGGCGATTGCCCAAA
CATCCCCTTGTCTAGTCTCCTACAGGAACAGTCAAAGAGACTCCTCTACC
GGGAGACGCTCAAGACAGGAAATGAGAATGAGAACGCTGACCCCGATTGT
CCAGATGACAACGGCGGAGTCCAAATCGAGCAGAACCTTTTGGAGATGGA
CTTTGACAACGACGAGGCCACTCGATCTGTTGTGGACGGGGTGGGCGGTC
TATCTCTTAACACCAACGTCCCAGAATGGAAGAGCAAGTCGTCTATGGCC
TCTCCGTCTATGACGAGTGAGATGAGAGGACGATCAGCATCGGCGGGGAA
GATGCCTGCATCGGGTGCCAGGCCATCGAGCCCAAGCCCAAGCCCGAGCA
ATTCATTTGGCAATATCCGCTTCGATGCAGGACACACTCTGCGCATGTTG
GACCAGAACTGGGACTCTACCGTATACTTCAGTTCCTTTTCCGGAAAGTT
TATCTGTCCCTGTAAGGCTGAATTCTCCAGCATGAAGGACTTTGAGGAGC
ATGTGGTAACGAAGACCAACCAGAACAGGAGCATTCAGTGCCCTGGATGC
CTTCGCGTCTTCAAAACGGCGGCTGCCCTGGTGGCTCATTGCGAGTCGGC
CAGTACTCGGTGCAAGGTGAACAAAGGGCTCCATTTCAGCCAGGTGATCA
ATGACATCAGTGGAGGGCTGGTCAAGTCAGTTGGTCATTTCGAGGACGGA
AGCGTTGAGTATGGTGCTGGCACAATGGGTCCGAAGAAGGTGACTTATAA
GAAAGACGAGGAGGGTCCTAATCTGATGGACTGAATGTCCGCTCACGGAT
CCTCCACCAGGGTGCCCTGCACCTACAAGGACTGCAGCGGTGTCTTTGGT
TCGGAGTGGGACATGAAGAGGCACAAGGTGAACGAACACGACTACTGCAA
GCGTTGCGACGAAGACTTCCAGGATGATGAGTATCTACTGCTCCACAAGA
TCAAGAGTGACAAGCATATCGTGTGTGTGGTGTGTGGGATCGATTTCCGC
AGCGAGGGTGGTAGAGACCTCCACACTCGCCAGCAACACCGAACTCCGCA
GAGCCTGATCTGTTACGGCTGCGGGCAGAGGTTCAGACAGGCAGGTGCCA
TGGTAAATCACGTTGAGAGCGGCGATTGCCCAAACATCCCCTTGTCTAGT
CTCCTACAGGAACAGTCAAAGAGACTCCTCTACCGGGAGACGCTCAAGAC
AGGAAATGAGAATGAGAACGCTGACCCCGATTGTCCAGATGACAACGGCG
GAGTCCAAATCGAGCAGAACCTTTTGGAGATGGACTTTGACAACGACGAG
GCCACTCGATCTGTTGTGGACGGGGTGGGCGGTCTATCTCTTAACACCAA
CGTCCCAGAATGGAAGAGCAAGTCGTCTATGGCCTCTCCGTCTATGACGA
GTGAGATGAGAGGACGATCAGCATCGGCGGGGAAGATGCCTGCATCGGGT
GCCAGGCCATCGAGCCCAAGCCCAAGCCCGAGCAATTCATTTGGCAATAT
CCGCTTCGATGCAGGACACACTCTGCGCATGTTGGACCAGAACTGGGACT
CTACCGTATACTTCAGTTCCTTTTCCGGAAAGTTTATCTGTCCCTGTAAG
GCTGAATTCTCCAGCATGAAGGACTTTGAGGAGCATGTGGTAACGAAGAC
CAACCAGAACAGGAGCATTCAGTGCCCTGGATGCCTTCGCGTCTTCAAAA
CGGCGGCTGCCCTGGTGGCTCATTGCGAGTCGGCCAGTACTCGGTGCAAG
GTGAACAAAGGGCTCCATTTCAGCCAGGTGATCAATGACATCAGTGGAGG
GCTGGTCAAGTCAGTTGGTCATTTCGAGGACGGAAGCGTTGAGTATGGTG
CTGGCACAATGGGTCCGAAGAAGGTGACTTATAAGAAAGACGAGGAGGGT
CCTAATCTGATGGACTGAATGTCCGCTCACGGATCCTCCACCAGGGTGCC
CTGCACCTACAAGGACTGCAGCGGTGTCTTTGGTTCGGAGTGGGACATGA
AGAGGCACAAGGTGAACGAACACGACTACTGCAAGCGTTGCGACGAAGAC
TTCCAGGATGATGAGTATCTACTGCTCCACAAGATCAAGAGTGACAAGCA
TATCGTGTGTGTGGTGTGTGGGATCGATTTCCGCAGCGAGGGTGGTAGAG
ACCTCCACACTCGCCAGCAACACCGAACTCCGCAGAGCCTGATCTGTTAC
GGCTGCGGGCAGAGGTTCAGACAGGCAGGTGCCATGGTAAATCACGTTGA
GAGCGGCGATTGCCCAAACATCCCCTTGTCTAGTCTCCTACAGGAACAGT
CAAAGAGACTCCTCTACCGGGAGACGCTCAAGACAGGAAATGAGAATGAG
AACGCTGACCCCGATTGTCCAGATGACAACGGCGGAGTCCAAATCGAGCA
GAACCTTTTGGAGATGGACTTTGACAACGACGAGGCCACTCGATCTGTTG
TGGACGGGGTGGGCGGTCTATCTCTTAACACCAACGTCCCAGAATGGAAG
AGCAAGTCGTCTATGGCCTCTCCGTCTATGACGAGTGAGATGAGAGGACG
ATCAGCATCGGCGGGGAAGATGCCTGCATCGGGTGCCAGGCCATCGAGCC
CAAGCCCAAGCCCGAGCAATTCATTTGGCAATATCCGCTTCGATGCAGGA
CACACTCTGCGCATGTTGGACCAGAACTGGGACTCTACCGTATACTTCAG
TTCCTTTTCCGGAAAGTTTATCTGTCCCTGTAAGGCTGAATTCTCCAGCA
TGAAGGACTTTGAGGAGCATGTGGTAACGAAGACCAACCAGAACAGGAGC
ATTCAGTGCCCTGGATGCCTTCGCGTCTTCAAAACGGCGGCTGCCCTGGT
GGCTCATTGCGAGTCGGCCAGTACTCGGTGCAAGGTGAACAAAGGGCTCC
ATTTCAGCCAGGTGATCAATGACATCAGTGGAGGGCTGGTCAAGTCAGTT
GGTCATTTCGAGGACGGAAGCGTTGAGTATGGTGCTGGCACAATGGGTCC
GAAGAAGGTGACTTATAAGAAAGACGAGGAGGGTCCTAATCTGATGGACT
GA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_32505CAN33_32505Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_32505-T1.exon1CAN33_32505-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_32505-T1.exon2CAN33_32505-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_32505-T1.exon3CAN33_32505-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_32505-T1.cdsCAN33_32505-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_32505-T1CAN33_32505-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR013087
ProductC2H2-type zinc finger family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000003.1supercontigNKJJ01000003.1:1744735..1746001 +
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