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CAN33_32780-T1, CAN33_32780-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_32780-T1
Unique NameCAN33_32780-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000003.1:1915268..1916680-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_32780-T1 ID=CAN33_32780-T1|Name=CAN33_32780-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1413bp|location=Sequence derived from alignment at NKJJ01000003.1:1915268..1916680- (Aspergillus niger FDAARGOS_311)
ATGGGCAAAGACCTCCTTTCCGCCATCGCCATCCCCGAGCTGACCGGTAA
AGTCGTCATCGTCACTGGCGGGCACACAGGACTGTACGTGGACTCTCTTG
GTTCCAATAATAATTATTTGCTACTTTTTGACTTTTTTCTTGTTCTTGTC
ATCCAACGGATCGGTAGTAGTTTCCTCGTATCCTTACTAACTCTCTCCTC
CACCAGTGGTTTTGGCACGAGCATCGAACTCGCCAGACATGGCGCCCGGG
TGTATATTGCCAGTCGATCCCAATCACGGTTCGAGCATGCCAGGCGGGAC
ATCATCGCGGAATGCTCGAAGCGTGAAGTAGACGTGAGGTTTCTCAATCT
CGACCTGTTCAGCATGAGTAGCGTTCGTCAGGCAGCTGAGCAGTTCGTTC
GGTGTGTCTTCGGTTTCTCTGTTATTAATGTTTTCTTTAATCCCCTTATT
TATTCATTGCCCAATCGTTTGCGGTGCTCATGACTGATGCACCGGACCTG
GTGATGTAGGCAGGAGTCGAGACTACATTTGCTGGTGAACAATGCCGGTG
TTGGTGACCCAGGCTTGACTGGACCTCTTGTAAAGGAGTTCCTCAGCTTA
CTTCAACTAGGTTATGTGTGTTCCATACGACGAAACACGAGATGGTTTTG
AGATTCAGCTAGCTGTGAGTGTACCTTCTTCTCGCCATCATCATATAAAA
CAGTTATATTTTCACGTTGTCTATACCAAAATGGAAAGAAGCATAGAAAC
AGAAAATCCTTGACGCTAATGATGAGCTCATGTAGGTCAACTACATCGGC
CATTTCCTATTTACTAGTTTACTCCTCCCAACCCTGCAGCAGACAGCAGC
CGAGGCAGCCGACAAGGGAAGCGTGCGCATCTTAAATGTGTCTAGTGACG
GACATGCCAAACTCGCCCCGAAGGAAGGCATTGTTTTCTCCGATATGAAT
ATGAAAGCCTACTCGGTCTGGGCTCGCTATGGCCACTCAAAGCTTGCCAA
TGTCCTGCACAGCAGGGAGCTGGCCAAGAGGTATCCGGACATCCTAGCAC
TCTCAGTGCACCCGGGAACCGTTAAGACGTAGGTGCTCTTCTCCCCGGGT
TCCATTCATACACCTCTGACATTCCTAACATCATACCAGAGGCCTGGCTG
CAGGCCCGATTTCCTCTACCCCGCTCTATAAATTGATAAAGCCGCTGGTC
GAGCTGGGTGCGCCAGGTCCACGCAAAGGAGCAGCCAACATTCTCTTCGC
GGCTGTATCGCCGCAGTTGACGCTCGAATGCCATAATGGGGCGTATCTGC
TTCCGATCGGAAGATTGTCGGCTCCCAGTAAGGCGGGATCAGATGCGAAA
ATGGCGGAGGAACTCTGGGAGTGGACCGTTAATGCGCTATCACATGTGCA
GGTCGATGAATAG
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Coding sequence (CDS) from alignment at NKJJ01000003.1:1915268..1916680-

>CAN33_32780-T1 ID=CAN33_32780-T1|Name=CAN33_32780-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3264bp|location=Sequence derived from alignment at NKJJ01000003.1:1915268..1916680- (Aspergillus niger FDAARGOS_311)
AGGCCTGGCTGCAGGCCCGATTTCCTCTACCCCGCTCTATAAATTGATAA
AGCCGCTGGTCGAGCTGGGTGCGCCAGGTCCACGCAAAGGAGCAGCCAAC
ATTCTCTTCGCGGCTGTATCGCCGCAGTTGACGCTCGAATGCCATAATGG
GGCGTATCTGCTTCCGATCGGAAGATTGTCGGCTCCCAGTAAGGCGGGAT
CAGATGCGAAAATGGCGGAGGAACTCTGGGAGTGGACCGTTAATGCGCTA
TCACATGTGCAGGTCGATGAATAGGTCAACTACATCGGCCATTTCCTATT
TACTAGTTTACTCCTCCCAACCCTGCAGCAGACAGCAGCCGAGGCAGCCG
ACAAGGGAAGCGTGCGCATCTTAAATGTGTCTAGTGACGGACATGCCAAA
CTCGCCCCGAAGGAAGGCATTGTTTTCTCCGATATGAATATGAAAGCCTA
CTCGGTCTGGGCTCGCTATGGCCACTCAAAGCTTGCCAATGTCCTGCACA
GCAGGGAGCTGGCCAAGAGGTATCCGGACATCCTAGCACTCTCAGTGCAC
CCGGGAACCGTTAAGACTGGTTTTGGCACGAGCATCGAACTCGCCAGACA
TGGCGCCCGGGTGTATATTGCCAGTCGATCCCAATCACGGTTCGAGCATG
CCAGGCGGGACATCATCGCGGAATGCTCGAAGCGTGAAGTAGACGTGAGG
TTTCTCAATCTCGACCTGTTCAGCATGAGTAGCATGGGCAAAGACCTCCT
TTCCGCCATCGCCATCCCCGAGCTGACCGGTAAAGTCGTCATCGTCACTG
GCGGGCACACAGGACTAGGCCTGGCTGCAGGCCCGATTTCCTCTACCCCG
CTCTATAAATTGATAAAGCCGCTGGTCGAGCTGGGTGCGCCAGGTCCACG
CAAAGGAGCAGCCAACATTCTCTTCGCGGCTGTATCGCCGCAGTTGACGC
TCGAATGCCATAATGGGGCGTATCTGCTTCCGATCGGAAGATTGTCGGCT
CCCAGTAAGGCGGGATCAGATGCGAAAATGGCGGAGGAACTCTGGGAGTG
GACCGTTAATGCGCTATCACATGTGCAGGTCGATGAATAGGTCAACTACA
TCGGCCATTTCCTATTTACTAGTTTACTCCTCCCAACCCTGCAGCAGACA
GCAGCCGAGGCAGCCGACAAGGGAAGCGTGCGCATCTTAAATGTGTCTAG
TGACGGACATGCCAAACTCGCCCCGAAGGAAGGCATTGTTTTCTCCGATA
TGAATATGAAAGCCTACTCGGTCTGGGCTCGCTATGGCCACTCAAAGCTT
GCCAATGTCCTGCACAGCAGGGAGCTGGCCAAGAGGTATCCGGACATCCT
AGCACTCTCAGTGCACCCGGGAACCGTTAAGACTGGTTTTGGCACGAGCA
TCGAACTCGCCAGACATGGCGCCCGGGTGTATATTGCCAGTCGATCCCAA
TCACGGTTCGAGCATGCCAGGCGGGACATCATCGCGGAATGCTCGAAGCG
TGAAGTAGACGTGAGGTTTCTCAATCTCGACCTGTTCAGCATGAGTAGCA
TGGGCAAAGACCTCCTTTCCGCCATCGCCATCCCCGAGCTGACCGGTAAA
GTCGTCATCGTCACTGGCGGGCACACAGGACTAGGCCTGGCTGCAGGCCC
GATTTCCTCTACCCCGCTCTATAAATTGATAAAGCCGCTGGTCGAGCTGG
GTGCGCCAGGTCCACGCAAAGGAGCAGCCAACATTCTCTTCGCGGCTGTA
TCGCCGCAGTTGACGCTCGAATGCCATAATGGGGCGTATCTGCTTCCGAT
CGGAAGATTGTCGGCTCCCAGTAAGGCGGGATCAGATGCGAAAATGGCGG
AGGAACTCTGGGAGTGGACCGTTAATGCGCTATCACATGTGCAGGTCGAT
GAATAGGTCAACTACATCGGCCATTTCCTATTTACTAGTTTACTCCTCCC
AACCCTGCAGCAGACAGCAGCCGAGGCAGCCGACAAGGGAAGCGTGCGCA
TCTTAAATGTGTCTAGTGACGGACATGCCAAACTCGCCCCGAAGGAAGGC
ATTGTTTTCTCCGATATGAATATGAAAGCCTACTCGGTCTGGGCTCGCTA
TGGCCACTCAAAGCTTGCCAATGTCCTGCACAGCAGGGAGCTGGCCAAGA
GGTATCCGGACATCCTAGCACTCTCAGTGCACCCGGGAACCGTTAAGACT
GGTTTTGGCACGAGCATCGAACTCGCCAGACATGGCGCCCGGGTGTATAT
TGCCAGTCGATCCCAATCACGGTTCGAGCATGCCAGGCGGGACATCATCG
CGGAATGCTCGAAGCGTGAAGTAGACGTGAGGTTTCTCAATCTCGACCTG
TTCAGCATGAGTAGCATGGGCAAAGACCTCCTTTCCGCCATCGCCATCCC
CGAGCTGACCGGTAAAGTCGTCATCGTCACTGGCGGGCACACAGGACTAG
GCCTGGCTGCAGGCCCGATTTCCTCTACCCCGCTCTATAAATTGATAAAG
CCGCTGGTCGAGCTGGGTGCGCCAGGTCCACGCAAAGGAGCAGCCAACAT
TCTCTTCGCGGCTGTATCGCCGCAGTTGACGCTCGAATGCCATAATGGGG
CGTATCTGCTTCCGATCGGAAGATTGTCGGCTCCCAGTAAGGCGGGATCA
GATGCGAAAATGGCGGAGGAACTCTGGGAGTGGACCGTTAATGCGCTATC
ACATGTGCAGGTCGATGAATAGGTCAACTACATCGGCCATTTCCTATTTA
CTAGTTTACTCCTCCCAACCCTGCAGCAGACAGCAGCCGAGGCAGCCGAC
AAGGGAAGCGTGCGCATCTTAAATGTGTCTAGTGACGGACATGCCAAACT
CGCCCCGAAGGAAGGCATTGTTTTCTCCGATATGAATATGAAAGCCTACT
CGGTCTGGGCTCGCTATGGCCACTCAAAGCTTGCCAATGTCCTGCACAGC
AGGGAGCTGGCCAAGAGGTATCCGGACATCCTAGCACTCTCAGTGCACCC
GGGAACCGTTAAGACTGGTTTTGGCACGAGCATCGAACTCGCCAGACATG
GCGCCCGGGTGTATATTGCCAGTCGATCCCAATCACGGTTCGAGCATGCC
AGGCGGGACATCATCGCGGAATGCTCGAAGCGTGAAGTAGACGTGAGGTT
TCTCAATCTCGACCTGTTCAGCATGAGTAGCATGGGCAAAGACCTCCTTT
CCGCCATCGCCATCCCCGAGCTGACCGGTAAAGTCGTCATCGTCACTGGC
GGGCACACAGGACT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_32780CAN33_32780Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_32780-T1CAN33_32780-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_32780-T1.cdsCAN33_32780-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_32780-T1.exon4CAN33_32780-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_32780-T1.exon3CAN33_32780-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_32780-T1.exon2CAN33_32780-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_32780-T1.exon1CAN33_32780-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
Productshort chain dehydrogenase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000003.1supercontigNKJJ01000003.1:1915268..1916680 -
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