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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000003.1:1943965..1945072- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_32830-T1 ID=CAN33_32830-T1|Name=CAN33_32830-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1108bp|location=Sequence derived from alignment at NKJJ01000003.1:1943965..1945072- (Aspergillus niger FDAARGOS_311)
ATGCAAGCTATCAAGAATACTATTGCCGAGAACTTCGGCGGTCCTTCTCA
CAATCTCGCAGAAGAGAAGTTTAATCTGGATGATGTGCCCGACCTGAGCG
GTAAGGTAGCGGTGGTTACCGGAGGTAGTGAAGGTATCCTGCTTAATCTT
CTCCCACAAGCCCGCCAACCCCCAGACCTGCAATTGGAAGTTAACCGCCT
TACAAACAATAGGGGTCGGTTTTGGCGTAACCCACATTCTTCTTTCTAAG
GGTATTTCGAAGCTTTTTGTGACTTCGCTCCGCAAGGAGGTAGCCGATGA
TGCTATATCCGCCATTGAGGAAGAGTTCGGTCCCGAGACACGCCGCCGCT
TCATCTGGATCCAATGTGATCTATCGGATTGGGAACAGACTGCCAAGGTG
GCAGCGGAGATTGCGTCGCAGACGGACCGCATCGACATACTTATCAATAA
TGCCGGCCGGGGCGTCATGACACGCCAGCTGGCTCCCACCAACGGGGTTG
ACCTGCACATGGCAGCCAACTACATGGGTCATGTCGTGCTGACCTCGCAC
CTGCTGCCAACGCTGAAAAAAACGGCTGACGCTGGAAACACCGTCCGTAT
TGTCAACCTCTCCTCCAATGTAGAAGGCAGCGCACCCAAGGACACGGAAT
TCGCGTCCGTGGAGGAGCTGAACCGCGAATATAGCCCGACAGAGTTATAC
GGTCGGTCTAAACTGGCGGTGCTCCTGTACGCCAAGTGGCTCCACGCCCA
TCTCCAACCTACACATCCCAATATCATTGTTAACGCAACTCACCCGGGGG
TTGTCGATACGGCGCAGACAAATGTTCACATACACGAGGCCCATCCCCTG
CTCGGCTATGGCCTGTCCGCCGGCCTGAAGCCGTTTCGAAAGACTCAGTT
CCAGGGCGCCGTATCCACCATGTATGCGGCGACCATGGCGACCGAGGGCG
GGCAGTTCATCAATCCGCCACGAATTGTGGAGAAGGGCAGTGCTAAGGCC
AACGACATGGAGTTAGCTGACAGGCTGATGAAGTTGACAGCTGAGGTGGT
GGAGAAGAAAACACGGCCGCAGAGTAGCGCCAAGGGTTGTCCATTCACCG
AAGACTAG back to topCoding sequence (CDS) from alignment at NKJJ01000003.1:1943965..1945072- >CAN33_32830-T1 ID=CAN33_32830-T1|Name=CAN33_32830-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2058bp|location=Sequence derived from alignment at NKJJ01000003.1:1943965..1945072- (Aspergillus niger FDAARGOS_311)
GGGTCGGTTTTGGCGTAACCCACATTCTTCTTTCTAAGGGTATTTCGAAG
CTTTTTGTGACTTCGCTCCGCAAGGAGGTAGCCGATGATGCTATATCCGC
CATTGAGGAAGAGTTCGGTCCCGAGACACGCCGCCGCTTCATCTGGATCC
AATGTGATCTATCGGATTGGGAACAGACTGCCAAGGTGGCAGCGGAGATT
GCGTCGCAGACGGACCGCATCGACATACTTATCAATAATGCCGGCCGGGG
CGTCATGACACGCCAGCTGGCTCCCACCAACGGGGTTGACCTGCACATGG
CAGCCAACTACATGGGTCATGTCGTGCTGACCTCGCACCTGCTGCCAACG
CTGAAAAAAACGGCTGACGCTGGAAACACCGTCCGTATTGTCAACCTCTC
CTCCAATGTAGAAGGCAGCGCACCCAAGGACACGGAATTCGCGTCCGTGG
AGGAGCTGAACCGCGAATATAGCCCGACAGAGTTATACGGTCGGTCTAAA
CTGGCGGTGCTCCTGTACGCCAAGTGGCTCCACGCCCATCTCCAACCTAC
ACATCCCAATATCATTGTTAACGCAACTCACCCGGGGGTTGTCGATACGG
CGCAGACAAATGTTCACATACACGAGGCCCATCCCCTGCTCGGCTATGGC
CTGTCCGCCGGCCTGAAGCCGTTTCGAAAGACTCAGTTCCAGGGCGCCGT
ATCCACCATGTATGCGGCGACCATGGCGACCGAGGGCGGGCAGTTCATCA
ATCCGCCACGAATTGTGGAGAAGGGCAGTGCTAAGGCCAACGACATGGAG
TTAGCTGACAGGCTGATGAAGTTGACAGCTGAGGTGGTGGAGAAGAAAAC
ACGGCCGCAGAGTAGCGCCAAGGGTTGTCCATTCACCGAAGACTAGATGC
AAGCTATCAAGAATACTATTGCCGAGAACTTCGGCGGTCCTTCTCACAAT
CTCGCAGAAGAGAAGTTTAATCTGGATGATGTGCCCGACCTGAGCGGTAA
GGTAGCGGTGGTTACCGGAGGTAGTGAAGGGGTCGGTTTTGGCGTAACCC
ACATTCTTCTTTCTAAGGGTATTTCGAAGCTTTTTGTGACTTCGCTCCGC
AAGGAGGTAGCCGATGATGCTATATCCGCCATTGAGGAAGAGTTCGGTCC
CGAGACACGCCGCCGCTTCATCTGGATCCAATGTGATCTATCGGATTGGG
AACAGACTGCCAAGGTGGCAGCGGAGATTGCGTCGCAGACGGACCGCATC
GACATACTTATCAATAATGCCGGCCGGGGCGTCATGACACGCCAGCTGGC
TCCCACCAACGGGGTTGACCTGCACATGGCAGCCAACTACATGGGTCATG
TCGTGCTGACCTCGCACCTGCTGCCAACGCTGAAAAAAACGGCTGACGCT
GGAAACACCGTCCGTATTGTCAACCTCTCCTCCAATGTAGAAGGCAGCGC
ACCCAAGGACACGGAATTCGCGTCCGTGGAGGAGCTGAACCGCGAATATA
GCCCGACAGAGTTATACGGTCGGTCTAAACTGGCGGTGCTCCTGTACGCC
AAGTGGCTCCACGCCCATCTCCAACCTACACATCCCAATATCATTGTTAA
CGCAACTCACCCGGGGGTTGTCGATACGGCGCAGACAAATGTTCACATAC
ACGAGGCCCATCCCCTGCTCGGCTATGGCCTGTCCGCCGGCCTGAAGCCG
TTTCGAAAGACTCAGTTCCAGGGCGCCGTATCCACCATGTATGCGGCGAC
CATGGCGACCGAGGGCGGGCAGTTCATCAATCCGCCACGAATTGTGGAGA
AGGGCAGTGCTAAGGCCAACGACATGGAGTTAGCTGACAGGCTGATGAAG
TTGACAGCTGAGGTGGTGGAGAAGAAAACACGGCCGCAGAGTAGCGCCAA
GGGTTGTCCATTCACCGAAGACTAGATGCAAGCTATCAAGAATACTATTG
CCGAGAACTTCGGCGGTCCTTCTCACAATCTCGCAGAAGAGAAGTTTAAT
CTGGATGATGTGCCCGACCTGAGCGGTAAGGTAGCGGTGGTTACCGGAGG
TAGTGAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF01370 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | short chain dehydrogenase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000003.1 | supercontig | NKJJ01000003.1:1943965..1945072 - |
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