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CAN33_33090-T1, CAN33_33090-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_33090-T1
Unique NameCAN33_33090-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000007.1:136281..137078+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_33090-T1 ID=CAN33_33090-T1|Name=CAN33_33090-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=798bp|location=Sequence derived from alignment at NKJJ01000007.1:136281..137078+ (Aspergillus niger FDAARGOS_311)
ATGTCGGGGAAAATGACGTTGTATAAATTGGTGGTGCTAGGGGATGGTGG
TGTCGGAAAAACAGCCCTCACAATTCAGGTTAGCCCTTCGCGTACCCGCC
CGCACTGGTGTTCTGACAACTGATCTTTGGACCTTGGTCTTGCCCAACAG
CTTTGTCTAAACCATTTCGTTGAGACCTACGATCCGACCATCGAAGACTC
GTATCGTAAACAAGTCGTGATTGATCAACAGTCGTGCATGTTGGAAGTAC
TGGACACAGCAGGTCAAGAGGAATATACTGCGCTGAGAGACCAGTGGATC
CGTGACGGCGAAGGGTTCGTTCTCGTCTACAGCATCACCTCGAGAGCTTC
TTTCTCCCGCATACAGAAATTCTACAATCAGATCAAGATGGTCAAGGAAT
CGGCCAACTCCGGATCGCCCTCGGGGGCCAGTTACTTGGGATCCCCGATT
CACACGCCTTCAGGCCCCCCGCTTCCGGTGCCGGTCATGTTGGTTGGCAA
CAAAAGCGACAAAGCCGTCGAGCGCGCGGTTTCAGCTCAGGAGGGGCAGG
CGCTTGCCAAGGATCTCGGTTGCGAATTCGTCGAGGCCTCCGCGAAGAAT
TGCATCAATGTGGAGAAGGCATTTTACGACGTGGTCCGGATGTTGCGACA
GCAGCGCCAGCAACAGCAAGGACGGTCTCAGGATAGACGAACGACCGGTT
TGGGTGCCGGGCGTGATCCTGGTCCCGAGTATCCCAGATCATTCCGGCCC
GACCGTACGGGAAGCCATCGCCGCCCGTTCAAGTGCACAATTCTGTGA
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Coding sequence (CDS) from alignment at NKJJ01000007.1:136281..137078+

>CAN33_33090-T1 ID=CAN33_33090-T1|Name=CAN33_33090-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1452bp|location=Sequence derived from alignment at NKJJ01000007.1:136281..137078+ (Aspergillus niger FDAARGOS_311)
ATGTCGGGGAAAATGACGTTGTATAAATTGGTGGTGCTAGGGGATGGTGG
TGTCGGAAAAACAGCCCTCACAATTCAGCTTTGTCTAAACCATTTCGTTG
AGACCTACGATCCGACCATCGAAGACTCGTATCGTAAACAAGTCGTGATT
GATCAACAGTCGTGCATGTTGGAAGTACTGGACACAGCAGGTCAAGAGGA
ATATACTGCGCTGAGAGACCAGTGGATCCGTGACGGCGAAGGGTTCGTTC
TCGTCTACAGCATCACCTCGAGAGCTTCTTTCTCCCGCATACAGAAATTC
TACAATCAGATCAAGATGGTCAAGGAATCGGCCAACTCCGGATCGCCCTC
GGGGGCCAGTTACTTGGGATCCCCGATTCACACGCCTTCAGGCCCCCCGC
TTCCGGTGCCGGTCATGTTGGTTGGCAACAAAAGCGACAAAGCCGTCGAG
CGCGCGGTTTCAGCTCAGGAGGGGCAGGCGCTTGCCAAGGATCTCGGTTG
CGAATTCGTCGAGGCCTCCGCGAAGAATTGCATCAATGTGGAGAAGGCAT
TTTACGACGTGGTCCGGATGTTGCGACAGCAGCGCCAGCAACAGCAAGGA
CGGTCTCAGGATAGACGAACGACCGGTTTGGGTGCCGGGCGTGATCCTGG
TCCCGAGTATCCCAGATCATTCCGGCCCGACCGTACGGGAAGCCATCGCC
GCCCGTTCAAGTGCACAATTCTGTGAATGTCGGGGAAAATGACGTTGTAT
AAATTGGTGGTGCTAGGGGATGGTGGTGTCGGAAAAACAGCCCTCACAAT
TCAGCTTTGTCTAAACCATTTCGTTGAGACCTACGATCCGACCATCGAAG
ACTCGTATCGTAAACAAGTCGTGATTGATCAACAGTCGTGCATGTTGGAA
GTACTGGACACAGCAGGTCAAGAGGAATATACTGCGCTGAGAGACCAGTG
GATCCGTGACGGCGAAGGGTTCGTTCTCGTCTACAGCATCACCTCGAGAG
CTTCTTTCTCCCGCATACAGAAATTCTACAATCAGATCAAGATGGTCAAG
GAATCGGCCAACTCCGGATCGCCCTCGGGGGCCAGTTACTTGGGATCCCC
GATTCACACGCCTTCAGGCCCCCCGCTTCCGGTGCCGGTCATGTTGGTTG
GCAACAAAAGCGACAAAGCCGTCGAGCGCGCGGTTTCAGCTCAGGAGGGG
CAGGCGCTTGCCAAGGATCTCGGTTGCGAATTCGTCGAGGCCTCCGCGAA
GAATTGCATCAATGTGGAGAAGGCATTTTACGACGTGGTCCGGATGTTGC
GACAGCAGCGCCAGCAACAGCAAGGACGGTCTCAGGATAGACGAACGACC
GGTTTGGGTGCCGGGCGTGATCCTGGTCCCGAGTATCCCAGATCATTCCG
GCCCGACCGTACGGGAAGCCATCGCCGCCCGTTCAAGTGCACAATTCTGT
GA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RAS2CAN33_33090Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_33090-T1.exon1CAN33_33090-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_33090-T1.exon2CAN33_33090-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_33090-T1.cdsCAN33_33090-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_33090-T1CAN33_33090-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR020849
DBxrefInterPro:IPR001806
DBxrefInterPro:IPR005225
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
ProductRas GTPase ras2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000007.1supercontigNKJJ01000007.1:136281..137078 +
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