|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000007.1:329359..330261- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_33310-T1 ID=CAN33_33310-T1|Name=CAN33_33310-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=903bp|location=Sequence derived from alignment at NKJJ01000007.1:329359..330261- (Aspergillus niger FDAARGOS_311)
ATGTCCTCCAAGTCGCAATTGACCTACACTGCCCGTGCCAGCAAGCATCC
CAATGCTCTGGCGAAGAGGCTGTTCGAGATTGCCGAGGCCAAGAAGACCA
ATGTGACTGTCTCGGCTGACGTTACCACCACTAAGGAGCTACTAGATCTT
GCTGACCGTAGGCCGACCCGCTACTCTGCCTGATTATGCTGCATGCAAAC
TTATTAACGGTGATACCGGACTGCAGGTCTCGGTCCCTACATTGCCGTGA
TCAAAACCCACATCGATATCCTCTCTGATTTCAGCAACGAGACCATTGAG
GGACTTAAGGCTCTCGCGCAGAAGCACAACTTTCTCATCTTCGAGGACCG
CAAGTTCATTGACATCGGCAACACGGTCCAGAAGCAATACCACGGCGGTA
CCCTCCGTATCTCGGAATGGGCCCACATCATCAACTGCAGCATTCTCCCT
GGTGAGGGTATCGTCGAGGCTCTCGCTCAGACGGCGTCTGCACCGGACTT
CGCCTACGGCCCCGAACGCGGTCTGTTGATCTTGGCAGAGATGACCTCTA
AGGGCTCCTTGGCTACCGGCCAGTACACTACTTCCTCGGTCGATTATGCC
CGGAAATACAAGAACTTCGTTATGGGATTCGTGTCGACGCGCGCGTTGGG
TGAGGTGCAGTCGGAAGTCAGCTCTCCTTCGGATGAGGAGGACTTTGTGG
TCTTCACGACTGGTGTGAACATTTCTTCCAAGGGAGATAAGCTTGGTCAG
CAGTACCAGACGCCCGGATCGGCTATCGGCCGGGGTGCTGACTTCATTAT
CGCGGGTCGCGGTATCTACGCCGCGCCGGATCCGGTGCAGGCTGCGCAAC
AGTATCAGAAGGAGGGGTGGGAAGCCTACCTGGCCCGTGTCGGCGGAAAC
TAA back to topCoding sequence (CDS) from alignment at NKJJ01000007.1:329359..330261- >CAN33_33310-T1 ID=CAN33_33310-T1|Name=CAN33_33310-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1668bp|location=Sequence derived from alignment at NKJJ01000007.1:329359..330261- (Aspergillus niger FDAARGOS_311)
GTCTCGGTCCCTACATTGCCGTGATCAAAACCCACATCGATATCCTCTCT
GATTTCAGCAACGAGACCATTGAGGGACTTAAGGCTCTCGCGCAGAAGCA
CAACTTTCTCATCTTCGAGGACCGCAAGTTCATTGACATCGGCAACACGG
TCCAGAAGCAATACCACGGCGGTACCCTCCGTATCTCGGAATGGGCCCAC
ATCATCAACTGCAGCATTCTCCCTGGTGAGGGTATCGTCGAGGCTCTCGC
TCAGACGGCGTCTGCACCGGACTTCGCCTACGGCCCCGAACGCGGTCTGT
TGATCTTGGCAGAGATGACCTCTAAGGGCTCCTTGGCTACCGGCCAGTAC
ACTACTTCCTCGGTCGATTATGCCCGGAAATACAAGAACTTCGTTATGGG
ATTCGTGTCGACGCGCGCGTTGGGTGAGGTGCAGTCGGAAGTCAGCTCTC
CTTCGGATGAGGAGGACTTTGTGGTCTTCACGACTGGTGTGAACATTTCT
TCCAAGGGAGATAAGCTTGGTCAGCAGTACCAGACGCCCGGATCGGCTAT
CGGCCGGGGTGCTGACTTCATTATCGCGGGTCGCGGTATCTACGCCGCGC
CGGATCCGGTGCAGGCTGCGCAACAGTATCAGAAGGAGGGGTGGGAAGCC
TACCTGGCCCGTGTCGGCGGAAACTAAATGTCCTCCAAGTCGCAATTGAC
CTACACTGCCCGTGCCAGCAAGCATCCCAATGCTCTGGCGAAGAGGCTGT
TCGAGATTGCCGAGGCCAAGAAGACCAATGTGACTGTCTCGGCTGACGTT
ACCACCACTAAGGAGCTACTAGATCTTGCTGACCGTCTCGGTCCCTACAT
TGCCGTGATCAAAACCCACATCGATATCCTCTCTGATTTCAGCAACGAGA
CCATTGAGGGACTTAAGGCTCTCGCGCAGAAGCACAACTTTCTCATCTTC
GAGGACCGCAAGTTCATTGACATCGGCAACACGGTCCAGAAGCAATACCA
CGGCGGTACCCTCCGTATCTCGGAATGGGCCCACATCATCAACTGCAGCA
TTCTCCCTGGTGAGGGTATCGTCGAGGCTCTCGCTCAGACGGCGTCTGCA
CCGGACTTCGCCTACGGCCCCGAACGCGGTCTGTTGATCTTGGCAGAGAT
GACCTCTAAGGGCTCCTTGGCTACCGGCCAGTACACTACTTCCTCGGTCG
ATTATGCCCGGAAATACAAGAACTTCGTTATGGGATTCGTGTCGACGCGC
GCGTTGGGTGAGGTGCAGTCGGAAGTCAGCTCTCCTTCGGATGAGGAGGA
CTTTGTGGTCTTCACGACTGGTGTGAACATTTCTTCCAAGGGAGATAAGC
TTGGTCAGCAGTACCAGACGCCCGGATCGGCTATCGGCCGGGGTGCTGAC
TTCATTATCGCGGGTCGCGGTATCTACGCCGCGCCGGATCCGGTGCAGGC
TGCGCAACAGTATCAGAAGGAGGGGTGGGAAGCCTACCTGGCCCGTGTCG
GCGGAAACTAAATGTCCTCCAAGTCGCAATTGACCTACACTGCCCGTGCC
AGCAAGCATCCCAATGCTCTGGCGAAGAGGCTGTTCGAGATTGCCGAGGC
CAAGAAGACCAATGTGACTGTCTCGGCTGACGTTACCACCACTAAGGAGC
TACTAGATCTTGCTGACC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0044205 | 'de novo' UMP biosynthetic process |
| GO:0006207 | 'de novo' pyrimidine nucleobase biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0004590 | orotidine-5'-phosphate decarboxylase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263Q7N |
| DBxref | InterPro:IPR011060 |
| DBxref | InterPro:IPR018089 |
| DBxref | InterPro:IPR013785 |
| DBxref | InterPro:IPR014732 |
| DBxref | InterPro:IPR001754 |
| DBxref | PFAM:PF00215 |
| Product | Orotidine 5'-phosphate decarboxylase / HUMPS family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000007.1 | supercontig | NKJJ01000007.1:329359..330261 - |
|
