|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000007.1:551584..552165+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_33710-T1 ID=CAN33_33710-T1|Name=CAN33_33710-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=582bp|location=Sequence derived from alignment at NKJJ01000007.1:551584..552165+ (Aspergillus niger FDAARGOS_311)
ATGGATTCTCAACCGTCATCGAAAGCGCTTCATTGTAAGCCGTACCCTGC
ATTTTTCACTTACCTCAGTTCCAAACCCCTCCATTGCACCGCTAACAACC
ATCCGTCGCAGATCGCATCAACACCAACATCTCGCAATTACTCCAACGCT
TCGAGAACATCATGGCAACAGCGACTGTTAGCTCACCTCACCCTCTTGCA
ATCTACACAAACCGGATAATCACTAACCCAGAAATCCAGACCGAAAGTAC
CAGCCACACCTCCACGGCCGTCGAGACATACCAGCTAGATGTGGAATCCA
CAGCGTTGGTACGTTCCAACTAATGCTCCTCTAATCCAACACAAACACAA
ATCCTACAATGTCAGGGAACACTTACTTACAGAATTGAATCTGAGATAGG
TCCGCGCAGCAGAAGACATCCTCGCCCTGACCCGGACAATGAAAGAAACC
TGGTTATTCGGGAAACTCGACACACTAGGCGAAGACGAAGCGGACGTGAA
ACGTCGCGAGGAACTAGAGATGAATGCGGAGGCGATTCAAAAGGCCATTG
AAGATGGGGGGTTTTTGAAGGCTGCTAAGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000007.1:551584..552165+ >CAN33_33710-T1 ID=CAN33_33710-T1|Name=CAN33_33710-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1242bp|location=Sequence derived from alignment at NKJJ01000007.1:551584..552165+ (Aspergillus niger FDAARGOS_311)
ATGGATTCTCAACCGTCATCGAAAGCGCTTCATTATCGCATCAACACCAA
CATCTCGCAATTACTCCAACGCTTCGAGAACATCATGGCAACAGCGACTG
TTAGCTCACCTCACCCTCTTGCAATCTACACAAACCGGATAATCACTAAC
CCAGAAATCCAGACCGAAAGTACCAGCCACACCTCCACGGCCGTCGAGAC
ATACCAGCTAGATGTGGAATCCACAGCGTTGGTCCGCGCAGCAGAAGACA
TCCTCGCCCTGACCCGGACAATGAAAGAAACCTGGTTATTCGGGAAACTC
GACACACTAGGCGAAGACGAAGCGGACGTGAAACGTCGCGAGGAACTAGA
GATGAATGCGGAGGCGATTCAAAAGGCCATTGAAGATGGGGGGTTTTTGA
AGGCTGCTAAGTGAATGGATTCTCAACCGTCATCGAAAGCGCTTCATTAT
CGCATCAACACCAACATCTCGCAATTACTCCAACGCTTCGAGAACATCAT
GGCAACAGCGACTGTTAGCTCACCTCACCCTCTTGCAATCTACACAAACC
GGATAATCACTAACCCAGAAATCCAGACCGAAAGTACCAGCCACACCTCC
ACGGCCGTCGAGACATACCAGCTAGATGTGGAATCCACAGCGTTGGTCCG
CGCAGCAGAAGACATCCTCGCCCTGACCCGGACAATGAAAGAAACCTGGT
TATTCGGGAAACTCGACACACTAGGCGAAGACGAAGCGGACGTGAAACGT
CGCGAGGAACTAGAGATGAATGCGGAGGCGATTCAAAAGGCCATTGAAGA
TGGGGGGTTTTTGAAGGCTGCTAAGTGAATGGATTCTCAACCGTCATCGA
AAGCGCTTCATTATCGCATCAACACCAACATCTCGCAATTACTCCAACGC
TTCGAGAACATCATGGCAACAGCGACTGTTAGCTCACCTCACCCTCTTGC
AATCTACACAAACCGGATAATCACTAACCCAGAAATCCAGACCGAAAGTA
CCAGCCACACCTCCACGGCCGTCGAGACATACCAGCTAGATGTGGAATCC
ACAGCGTTGGTCCGCGCAGCAGAAGACATCCTCGCCCTGACCCGGACAAT
GAAAGAAACCTGGTTATTCGGGAAACTCGACACACTAGGCGAAGACGAAG
CGGACGTGAAACGTCGCGAGGAACTAGAGATGAATGCGGAGGCGATTCAA
AAGGCCATTGAAGATGGGGGGTTTTTGAAGGCTGCTAAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016592 | mediator complex |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003712 | transcription coregulator activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006357 | regulation of transcription by RNA polymerase II |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR038427 |
| DBxref | InterPro:IPR009332 |
| DBxref | PFAM:PF06179 |
| Product | Surfeit locus protein 5 subunit 22 of Mediator complex family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000007.1 | supercontig | NKJJ01000007.1:551584..552165 + |
|
