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CAN33_33805-T1, CAN33_33805-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_33805-T1
Unique NameCAN33_33805-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000007.1:609382..610342+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_33805-T1 ID=CAN33_33805-T1|Name=CAN33_33805-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=961bp|location=Sequence derived from alignment at NKJJ01000007.1:609382..610342+ (Aspergillus niger FDAARGOS_311)
ATGGCTCCCGGAGCCGGAAAGAGTGTCTTCCTGGGGAATATCCCTTATAG
TATGTTCCCTGTCTCTGTCTTGCATCCACCACAACCACCCCAATGGCATC
AAACTAACCCATCACTTCTCAGACCTCACGGAAGAACAAGTTAAAGACAT
CCTCAGCTCCGCCGGCACAGTAACCAAATTCCGCCTGATGATGAACCCTG
AGACCGGTAAGCCCAAAGGTTACGGTTTCGCCGACTTTGCCGACGCCGAT
GCGGCCGCCTCCGCTGTCCGCAACTTGAACGACTACGAGATCATGGGCCG
CAAGATTCGGGTCGACTGGCCGCACAACAATGAAAAGGACTCCATACCCC
CCGACTACTCCCAGCTCTCCGCACCCGCTGTCCAAGACGGCTCCCAACAG
CAACAACAGCAGCAGTCCGCGCCTCTTCCTCCTCTGCCCCCGGGTGTCGA
AGTTCCCCCGCATCTCGATTGCCCCAACGCCATCTCTCAGACACTCGCTT
CCCTGCCCCCGAACCAGCTCCTCGATGTCCTCTCCCAGATGAAGTCGCTT
GTCATGGCGGATCCCGCCAGAGCGACAGAGCTTCTACGCCAAGCTCCTCA
GCTCGCCTACGCAATCTTCCAAGCATTGCTACTCATGAACCTGGTCGATT
ACGGTGCTCTAGGCTCGGTGGTGGAACAAGCGAGCCAACCTAGTGCACCT
GCACCCCCTCCTGCCGCCGCGCAAGCCTTCCAACCCTTCTCCGCTGTACC
GGGACCGGTGTCTACGCCTCCAATGGTCAACACTCCTTTCGCTGCTGCCG
CCGCCCCGCCGCAACAACCCCCGCAGGCTATGCCAGGACAGGAAGAGCTC
CTACAGCAAGTGCTCAGTATGCCGCAAGCTGCGATCGATGCGCTCCCACC
CATGGAGCGCAGCCAGATCATGCTCCTTCGGCAGCAGTTGATGCAGGGTG
CTATGCGGTGA
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Coding sequence (CDS) from alignment at NKJJ01000007.1:609382..610342+

>CAN33_33805-T1 ID=CAN33_33805-T1|Name=CAN33_33805-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1776bp|location=Sequence derived from alignment at NKJJ01000007.1:609382..610342+ (Aspergillus niger FDAARGOS_311)
ATGGCTCCCGGAGCCGGAAAGAGTGTCTTCCTGGGGAATATCCCTTATAA
CCTCACGGAAGAACAAGTTAAAGACATCCTCAGCTCCGCCGGCACAGTAA
CCAAATTCCGCCTGATGATGAACCCTGAGACCGGTAAGCCCAAAGGTTAC
GGTTTCGCCGACTTTGCCGACGCCGATGCGGCCGCCTCCGCTGTCCGCAA
CTTGAACGACTACGAGATCATGGGCCGCAAGATTCGGGTCGACTGGCCGC
ACAACAATGAAAAGGACTCCATACCCCCCGACTACTCCCAGCTCTCCGCA
CCCGCTGTCCAAGACGGCTCCCAACAGCAACAACAGCAGCAGTCCGCGCC
TCTTCCTCCTCTGCCCCCGGGTGTCGAAGTTCCCCCGCATCTCGATTGCC
CCAACGCCATCTCTCAGACACTCGCTTCCCTGCCCCCGAACCAGCTCCTC
GATGTCCTCTCCCAGATGAAGTCGCTTGTCATGGCGGATCCCGCCAGAGC
GACAGAGCTTCTACGCCAAGCTCCTCAGCTCGCCTACGCAATCTTCCAAG
CATTGCTACTCATGAACCTGGTCGATTACGGTGCTCTAGGCTCGGTGGTG
GAACAAGCGAGCCAACCTAGTGCACCTGCACCCCCTCCTGCCGCCGCGCA
AGCCTTCCAACCCTTCTCCGCTGTACCGGGACCGGTGTCTACGCCTCCAA
TGGTCAACACTCCTTTCGCTGCTGCCGCCGCCCCGCCGCAACAACCCCCG
CAGGCTATGCCAGGACAGGAAGAGCTCCTACAGCAAGTGCTCAGTATGCC
GCAAGCTGCGATCGATGCGCTCCCACCCATGGAGCGCAGCCAGATCATGC
TCCTTCGGCAGCAGTTGATGCAGGGTGCTATGCGGTGAATGGCTCCCGGA
GCCGGAAAGAGTGTCTTCCTGGGGAATATCCCTTATAACCTCACGGAAGA
ACAAGTTAAAGACATCCTCAGCTCCGCCGGCACAGTAACCAAATTCCGCC
TGATGATGAACCCTGAGACCGGTAAGCCCAAAGGTTACGGTTTCGCCGAC
TTTGCCGACGCCGATGCGGCCGCCTCCGCTGTCCGCAACTTGAACGACTA
CGAGATCATGGGCCGCAAGATTCGGGTCGACTGGCCGCACAACAATGAAA
AGGACTCCATACCCCCCGACTACTCCCAGCTCTCCGCACCCGCTGTCCAA
GACGGCTCCCAACAGCAACAACAGCAGCAGTCCGCGCCTCTTCCTCCTCT
GCCCCCGGGTGTCGAAGTTCCCCCGCATCTCGATTGCCCCAACGCCATCT
CTCAGACACTCGCTTCCCTGCCCCCGAACCAGCTCCTCGATGTCCTCTCC
CAGATGAAGTCGCTTGTCATGGCGGATCCCGCCAGAGCGACAGAGCTTCT
ACGCCAAGCTCCTCAGCTCGCCTACGCAATCTTCCAAGCATTGCTACTCA
TGAACCTGGTCGATTACGGTGCTCTAGGCTCGGTGGTGGAACAAGCGAGC
CAACCTAGTGCACCTGCACCCCCTCCTGCCGCCGCGCAAGCCTTCCAACC
CTTCTCCGCTGTACCGGGACCGGTGTCTACGCCTCCAATGGTCAACACTC
CTTTCGCTGCTGCCGCCGCCCCGCCGCAACAACCCCCGCAGGCTATGCCA
GGACAGGAAGAGCTCCTACAGCAAGTGCTCAGTATGCCGCAAGCTGCGAT
CGATGCGCTCCCACCCATGGAGCGCAGCCAGATCATGCTCCTTCGGCAGC
AGTTGATGCAGGGTGCTATGCGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0031124mRNA 3'-end processing
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_33805CAN33_33805Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_33805-T1.exon1CAN33_33805-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_33805-T1.exon2CAN33_33805-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_33805-T1.cdsCAN33_33805-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_33805-T1CAN33_33805-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR038192
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR025742
DBxrefInterPro:IPR026896
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
DBxrefPFAM:PF14304
DBxrefPFAM:PF14327
ProductHinge domain of cleavage stimulation factor subunit 2 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000007.1supercontigNKJJ01000007.1:609382..610342 +
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