You are here

Home

CAN33_3420-T1, CAN33_3420-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_3420-T1
Unique NameCAN33_3420-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:2182624..2183255+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_3420-T1 ID=CAN33_3420-T1|Name=CAN33_3420-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=632bp|location=Sequence derived from alignment at NKJJ01000004.1:2182624..2183255+ (Aspergillus niger FDAARGOS_311)
ATGGCCGACGAACAACCCCCCAACCCCGCCGAGCTCGCCCGCCGCGAGGA
AGAAGAATCCGCCCGCAAAGCCCGCGAAGCCGCCGAACAAGCCGAATTGC
CCTACAAATGGACCCAAACGATCCGCGACGTGGAGGTGACAATCCCGGTG
GCATCGAATATCCGCGGTCGGGATCTAGATGTTGTGCTCACGAAGACGAA
AATTCGCGTTGCGATCAAGGGGCAGGAGGCTTTTATTGACGTACATAACC
CCACTCTACAACTCTCTTACGACAATACTAACAATAGTAATGGGGATTTT
TTTAGGGCGAGTTTCCTCATCCAGTAATCCCCGATGAATGCTCCTGGACC
CTTGAATCGACATCGAAGCCGCCCGGCAAGGAAATCTCGATCCACTTGGA
CAAGGTGAACAAGGTGGAGTGGTGGGCGCATGTTGTTACGAGTGCGCCGA
AGATCGATGTTACGAAGATTACGCCGGAGAACTCGTCGCTGAGTGAGTTG
GATGGCGAGACGAGAGCAATGGTCGAGAAGATGATGTATGATCAGAGGCA
GAAGGAGATGGGTGGGTTGACGAGTGATGAGCAGAAGAAGAGGGATATTT
TGAAGAAGTTTCAGGAGGAACATCCTGGTTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000004.1:2182624..2183255+

>CAN33_3420-T1 ID=CAN33_3420-T1|Name=CAN33_3420-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1134bp|location=Sequence derived from alignment at NKJJ01000004.1:2182624..2183255+ (Aspergillus niger FDAARGOS_311)
ATGGCCGACGAACAACCCCCCAACCCCGCCGAGCTCGCCCGCCGCGAGGA
AGAAGAATCCGCCCGCAAAGCCCGCGAAGCCGCCGAACAAGCCGAATTGC
CCTACAAATGGACCCAAACGATCCGCGACGTGGAGGTGACAATCCCGGTG
GCATCGAATATCCGCGGTCGGGATCTAGATGTTGTGCTCACGAAGACGAA
AATTCGCGTTGCGATCAAGGGGCAGGAGGCTTTTATTGACGGCGAGTTTC
CTCATCCAGTAATCCCCGATGAATGCTCCTGGACCCTTGAATCGACATCG
AAGCCGCCCGGCAAGGAAATCTCGATCCACTTGGACAAGGTGAACAAGGT
GGAGTGGTGGGCGCATGTTGTTACGAGTGCGCCGAAGATCGATGTTACGA
AGATTACGCCGGAGAACTCGTCGCTGAGTGAGTTGGATGGCGAGACGAGA
GCAATGGTCGAGAAGATGATGTATGATCAGAGGCAGAAGGAGATGGGTGG
GTTGACGAGTGATGAGCAGAAGAAGAGGGATATTTTGAAGAAGTTTCAGG
AGGAACATCCTGGTTAGATGGCCGACGAACAACCCCCCAACCCCGCCGAG
CTCGCCCGCCGCGAGGAAGAAGAATCCGCCCGCAAAGCCCGCGAAGCCGC
CGAACAAGCCGAATTGCCCTACAAATGGACCCAAACGATCCGCGACGTGG
AGGTGACAATCCCGGTGGCATCGAATATCCGCGGTCGGGATCTAGATGTT
GTGCTCACGAAGACGAAAATTCGCGTTGCGATCAAGGGGCAGGAGGCTTT
TATTGACGGCGAGTTTCCTCATCCAGTAATCCCCGATGAATGCTCCTGGA
CCCTTGAATCGACATCGAAGCCGCCCGGCAAGGAAATCTCGATCCACTTG
GACAAGGTGAACAAGGTGGAGTGGTGGGCGCATGTTGTTACGAGTGCGCC
GAAGATCGATGTTACGAAGATTACGCCGGAGAACTCGTCGCTGAGTGAGT
TGGATGGCGAGACGAGAGCAATGGTCGAGAAGATGATGTATGATCAGAGG
CAGAAGGAGATGGGTGGGTTGACGAGTGATGAGCAGAAGAAGAGGGATAT
TTTGAAGAAGTTTCAGGAGGAACATCCTGGTTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_3420CAN33_3420Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3420-T1.exon1CAN33_3420-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_3420-T1.exon2CAN33_3420-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3420-T1.cdsCAN33_3420-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3420-T1CAN33_3420-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR007052
DBxrefInterPro:IPR008978
DBxrefPFAM:PF04969
ProductCS domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:2182624..2183255 +
Powered by Drupal