|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000004.1:2183647..2185830+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_3425-T1 ID=CAN33_3425-T1|Name=CAN33_3425-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2184bp|location=Sequence derived from alignment at NKJJ01000004.1:2183647..2185830+ (Aspergillus niger FDAARGOS_311)
ATGCAGTCTGTCCTCCAGCTTCGCCCTTCTCCCCGTACTTTTCATCCCCG
ACGCCCGCATCGCAAATCCCGCGCTGGCTGCCTCGTTTGCAAGCAGCGAC
GAGTCAAGGTATTCCCTCTCTACTCTTCTGGTCAACATCCTCTCTGATCG
CCTCCTTCCTAACGACAGTGCGACGAGGAGAAACCATCCTGTCACCGATG
CCAAAAACTCGGGTTCGACTGCAGCTATGAGCCCGAGACCAAAGACAGCG
TCAGCGTCTTCCTTGCAAGCCCGCCCGATTCAAAAGCGTACTGCATGTCG
GTGGACACCGTGATCAAGAAGATCAACGAGATCCTGCAGTTGGATTCAAA
AAGCGGCCCATTGCCTGTAGTGCAGGCATTGCAGCACTTCCACCATGGCC
TAACGAACCCGGCGCTCGGGCCGGGACGCGCTCAATCCGCTATGCAGGCG
AAAATCATCCAGCTAGGGTTTAATGTATGCTCTTGACTTCATCTTACTAA
GGAGGACTGCTGCTGACAATGAAGTCACCTTTCCTTCTGCATACCATCAT
TGCAGCAGCAACTTCGCATATCCGCCACATGGCTTCGGATGGTCGCGTCT
ATACCCTGACGGAAACTTACCACTGGCAGCAGGCTATCACCCAGTATTCT
CAGGAAATTACCACCATCGGCCCGAAGAACACGGATAGTCTCATTTCTGC
ATGCTTGCTATTGACTATTCGCTCCTTTGCTCTAGATGAATACGACCCGC
TCAGCTCGTTTGTCTTCTCAGACGATATTACCTCCCTGAGCTGGCTGACA
CTGCAAGGGGGCTTGCGCCATCTGATCATGGCGACGGTGCAGTGGAAAGT
TGGCAGTATGTGGTGGGAGGTATTCATGAAATCTCATGCTGAGACGGCGG
ATTTCTTTGAGGATGATCGTCCTGGCCGGGTGGCTATTCATCCGGGGCTA
GCTGATCTATGTGGTATCGATGACATGACCACCGCAAAGACGAGCCCGTA
TCATGCGCCAGCACGAATACTGACAGGACTGCTGTCGCTGGAGCGAGGAG
TCCGGAGCTTTGCACCGTACACGGGATTCATGGGGAGACTGCTACCTGAG
TTCTTTGCTAAGTTGATGCAGAAAGATCCACCGGCATTGATACTGCTGAG
TTGGTGGTTGGGCTTAATGTATGGGACGGAGATGTATTGGGTCGAGACGC
GAGCGAGATCAGAAATTACGGCGATAACGTGGTATTTGGGGGAGGGATGG
GACGAGTTCATGAAGTTTCCAAGGCAGTGTATAGAGGACTACCAGAATGC
TTGCATACCAGAATGAACTGGAATGATGCTATCTTATCCGCTTATCGATA
AAGTTCAGGCCAGGAGCGGGGAACTCCACCAATCAGCGATGCGGGGAACG
TAGATGCCTGGATGCTGAGGCGCAGCCTCGTCGTGACTTTTGACTTTCTT
TCCTTCGTTTCATTCTCGTAGACATCACCTTTCAACCAGGGACACGTAGT
CTCTGCATCGCATTGACGTGCTCCGGTGTCTCAATCAACCTTCTTCCACT
TTGCCCCTCCACCACCACCACCGCCATCGACTCCCGTCTCACAACGGGTG
GACTCCGAATCAGGAACATCTACAGCAGACTCACCACCTCACTCCAACAA
CTACACACGAACATCTCCTCCACAACTGTACCAAGACCAAGAACGAACAG
CAACAATGCTCTCAACCCTCCTCGCATCCCTCTGTCCATGCTCCTGCACC
AGTCCCAGCCCTCCCCCACCACCAGCTCCGACAACCACATCCACCCAATA
CCACCACCACAATGACCTATCCCAATACCAACCTCCCTCGAACCCTCCCT
CCCAGCCTACACCCCTCACCCAAACATCCGAGACCTAAACGAAAAGACCC
TCGCCCTGCACCTCCGCGACCCGCCCATCTCTTCATCCTCCTACAATACC
ACCAACAGCAACAATTCCTTCCCCCTCGACGAAAAACACCCCTACACTAC
CACCACCCCACAAACATCAGAGAATAATGCTGCTGCAACAACAGCAGATG
ACGCATCCTCTCAAATCTCCTTCCCTAGCACAACCCACAGCTACGGGAAC
ACCTCCACCGCGACGAGAGAGACGCCTCCTCCGCCGTATTCGCCGACGTG
GAGGGGCCATGCAGAGGGGGAGGTCGAGGGGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000004.1:2183647..2185830+ >CAN33_3425-T1 ID=CAN33_3425-T1|Name=CAN33_3425-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5472bp|location=Sequence derived from alignment at NKJJ01000004.1:2183647..2185830+ (Aspergillus niger FDAARGOS_311)
ATGCAGTCTGTCCTCCAGCTTCGCCCTTCTCCCCGTACTTTTCATCCCCG
ACGCCCGCATCGCAAATCCCGCGCTGGCTGCCTCGTTTGCAAGCAGCGAC
GAGTCAAGTGCGACGAGGAGAAACCATCCTGTCACCGATGCCAAAAACTC
GGGTTCGACTGCAGCTATGAGCCCGAGACCAAAGACAGCGTCAGCGTCTT
CCTTGCAAGCCCGCCCGATTCAAAAGCGTACTGCATGTCGGTGGACACCG
TGATCAAGAAGATCAACGAGATCCTGCAGTTGGATTCAAAAAGCGGCCCA
TTGCCTGTAGTGCAGGCATTGCAGCACTTCCACCATGGCCTAACGAACCC
GGCGCTCGGGCCGGGACGCGCTCAATCCGCTATGCAGGCGAAAATCATCC
AGCTAGGGTTTAATTCACCTTTCCTTCTGCATACCATCATTGCAGCAGCA
ACTTCGCATATCCGCCACATGGCTTCGGATGGTCGCGTCTATACCCTGAC
GGAAACTTACCACTGGCAGCAGGCTATCACCCAGTATTCTCAGGAAATTA
CCACCATCGGCCCGAAGAACACGGATAGTCTCATTTCTGCATGCTTGCTA
TTGACTATTCGCTCCTTTGCTCTAGATGAATACGACCCGCTCAGCTCGTT
TGTCTTCTCAGACGATATTACCTCCCTGAGCTGGCTGACACTGCAAGGGG
GCTTGCGCCATCTGATCATGGCGACGGTGCAGTGGAAAGTTGGCAGTATG
TGGTGGGAGGTATTCATGAAATCTCATGCTGAGACGGCGGATTTCTTTGA
GGATGATCGTCCTGGCCGGGTGGCTATTCATCCGGGGCTAGCTGATCTAT
GTGGTATCGATGACATGACCACCGCAAAGACGAGCCCGTATCATGCGCCA
GCACGAATACTGACAGGACTGCTGTCGCTGGAGCGAGGAGTCCGGAGCTT
TGCACCGTACACGGGATTCATGGGGAGACTGCTACCTGAGTTCTTTGCTA
AGTTGATGCAGAAAGATCCACCGGCATTGATACTGCTGACCTACACCCCT
CACCCAAACATCCGAGACCTAAACGAAAAGACCCTCGCCCTGCACCTCCG
CGACCCGCCCATCTCTTCATCCTCCTACAATACCACCAACAGCAACAATT
CCTTCCCCCTCGACGAAAAACACCCCTACACTACCACCACCCCACAAACA
TCAGAGAATAATGCTGCTGCAACAACAGCAGATGACGCATCCTCTCAAAT
CTCCTTCCCTAGCACAACCCACAGCTACGGGAACACCTCCACCGCGACGA
GAGAGACGCCTCCTCCGCCGTATTCGCCGACGTGGAGGGGCCATGCAGAG
GGGGAGGTCGAGGGGTGAATGCAGTCTGTCCTCCAGCTTCGCCCTTCTCC
CCGTACTTTTCATCCCCGACGCCCGCATCGCAAATCCCGCGCTGGCTGCC
TCGTTTGCAAGCAGCGACGAGTCAAGTGCGACGAGGAGAAACCATCCTGT
CACCGATGCCAAAAACTCGGGTTCGACTGCAGCTATGAGCCCGAGACCAA
AGACAGCGTCAGCGTCTTCCTTGCAAGCCCGCCCGATTCAAAAGCGTACT
GCATGTCGGTGGACACCGTGATCAAGAAGATCAACGAGATCCTGCAGTTG
GATTCAAAAAGCGGCCCATTGCCTGTAGTGCAGGCATTGCAGCACTTCCA
CCATGGCCTAACGAACCCGGCGCTCGGGCCGGGACGCGCTCAATCCGCTA
TGCAGGCGAAAATCATCCAGCTAGGGTTTAATTCACCTTTCCTTCTGCAT
ACCATCATTGCAGCAGCAACTTCGCATATCCGCCACATGGCTTCGGATGG
TCGCGTCTATACCCTGACGGAAACTTACCACTGGCAGCAGGCTATCACCC
AGTATTCTCAGGAAATTACCACCATCGGCCCGAAGAACACGGATAGTCTC
ATTTCTGCATGCTTGCTATTGACTATTCGCTCCTTTGCTCTAGATGAATA
CGACCCGCTCAGCTCGTTTGTCTTCTCAGACGATATTACCTCCCTGAGCT
GGCTGACACTGCAAGGGGGCTTGCGCCATCTGATCATGGCGACGGTGCAG
TGGAAAGTTGGCAGTATGTGGTGGGAGGTATTCATGAAATCTCATGCTGA
GACGGCGGATTTCTTTGAGGATGATCGTCCTGGCCGGGTGGCTATTCATC
CGGGGCTAGCTGATCTATGTGGTATCGATGACATGACCACCGCAAAGACG
AGCCCGTATCATGCGCCAGCACGAATACTGACAGGACTGCTGTCGCTGGA
GCGAGGAGTCCGGAGCTTTGCACCGTACACGGGATTCATGGGGAGACTGC
TACCTGAGTTCTTTGCTAAGTTGATGCAGAAAGATCCACCGGCATTGATA
CTGCTGACCTACACCCCTCACCCAAACATCCGAGACCTAAACGAAAAGAC
CCTCGCCCTGCACCTCCGCGACCCGCCCATCTCTTCATCCTCCTACAATA
CCACCAACAGCAACAATTCCTTCCCCCTCGACGAAAAACACCCCTACACT
ACCACCACCCCACAAACATCAGAGAATAATGCTGCTGCAACAACAGCAGA
TGACGCATCCTCTCAAATCTCCTTCCCTAGCACAACCCACAGCTACGGGA
ACACCTCCACCGCGACGAGAGAGACGCCTCCTCCGCCGTATTCGCCGACG
TGGAGGGGCCATGCAGAGGGGGAGGTCGAGGGGTGAATGCAGTCTGTCCT
CCAGCTTCGCCCTTCTCCCCGTACTTTTCATCCCCGACGCCCGCATCGCA
AATCCCGCGCTGGCTGCCTCGTTTGCAAGCAGCGACGAGTCAAGTGCGAC
GAGGAGAAACCATCCTGTCACCGATGCCAAAAACTCGGGTTCGACTGCAG
CTATGAGCCCGAGACCAAAGACAGCGTCAGCGTCTTCCTTGCAAGCCCGC
CCGATTCAAAAGCGTACTGCATGTCGGTGGACACCGTGATCAAGAAGATC
AACGAGATCCTGCAGTTGGATTCAAAAAGCGGCCCATTGCCTGTAGTGCA
GGCATTGCAGCACTTCCACCATGGCCTAACGAACCCGGCGCTCGGGCCGG
GACGCGCTCAATCCGCTATGCAGGCGAAAATCATCCAGCTAGGGTTTAAT
TCACCTTTCCTTCTGCATACCATCATTGCAGCAGCAACTTCGCATATCCG
CCACATGGCTTCGGATGGTCGCGTCTATACCCTGACGGAAACTTACCACT
GGCAGCAGGCTATCACCCAGTATTCTCAGGAAATTACCACCATCGGCCCG
AAGAACACGGATAGTCTCATTTCTGCATGCTTGCTATTGACTATTCGCTC
CTTTGCTCTAGATGAATACGACCCGCTCAGCTCGTTTGTCTTCTCAGACG
ATATTACCTCCCTGAGCTGGCTGACACTGCAAGGGGGCTTGCGCCATCTG
ATCATGGCGACGGTGCAGTGGAAAGTTGGCAGTATGTGGTGGGAGGTATT
CATGAAATCTCATGCTGAGACGGCGGATTTCTTTGAGGATGATCGTCCTG
GCCGGGTGGCTATTCATCCGGGGCTAGCTGATCTATGTGGTATCGATGAC
ATGACCACCGCAAAGACGAGCCCGTATCATGCGCCAGCACGAATACTGAC
AGGACTGCTGTCGCTGGAGCGAGGAGTCCGGAGCTTTGCACCGTACACGG
GATTCATGGGGAGACTGCTACCTGAGTTCTTTGCTAAGTTGATGCAGAAA
GATCCACCGGCATTGATACTGCTGACCTACACCCCTCACCCAAACATCCG
AGACCTAAACGAAAAGACCCTCGCCCTGCACCTCCGCGACCCGCCCATCT
CTTCATCCTCCTACAATACCACCAACAGCAACAATTCCTTCCCCCTCGAC
GAAAAACACCCCTACACTACCACCACCCCACAAACATCAGAGAATAATGC
TGCTGCAACAACAGCAGATGACGCATCCTCTCAAATCTCCTTCCCTAGCA
CAACCCACAGCTACGGGAACACCTCCACCGCGACGAGAGAGACGCCTCCT
CCGCCGTATTCGCCGACGTGGAGGGGCCATGCAGAGGGGGAGGTCGAGGG
GTGAATGCAGTCTGTCCTCCAGCTTCGCCCTTCTCCCCGTACTTTTCATC
CCCGACGCCCGCATCGCAAATCCCGCGCTGGCTGCCTCGTTTGCAAGCAG
CGACGAGTCAAGTGCGACGAGGAGAAACCATCCTGTCACCGATGCCAAAA
ACTCGGGTTCGACTGCAGCTATGAGCCCGAGACCAAAGACAGCGTCAGCG
TCTTCCTTGCAAGCCCGCCCGATTCAAAAGCGTACTGCATGTCGGTGGAC
ACCGTGATCAAGAAGATCAACGAGATCCTGCAGTTGGATTCAAAAAGCGG
CCCATTGCCTGTAGTGCAGGCATTGCAGCACTTCCACCATGGCCTAACGA
ACCCGGCGCTCGGGCCGGGACGCGCTCAATCCGCTATGCAGGCGAAAATC
ATCCAGCTAGGGTTTAATTCACCTTTCCTTCTGCATACCATCATTGCAGC
AGCAACTTCGCATATCCGCCACATGGCTTCGGATGGTCGCGTCTATACCC
TGACGGAAACTTACCACTGGCAGCAGGCTATCACCCAGTATTCTCAGGAA
ATTACCACCATCGGCCCGAAGAACACGGATAGTCTCATTTCTGCATGCTT
GCTATTGACTATTCGCTCCTTTGCTCTAGATGAATACGACCCGCTCAGCT
CGTTTGTCTTCTCAGACGATATTACCTCCCTGAGCTGGCTGACACTGCAA
GGGGGCTTGCGCCATCTGATCATGGCGACGGTGCAGTGGAAAGTTGGCAG
TATGTGGTGGGAGGTATTCATGAAATCTCATGCTGAGACGGCGGATTTCT
TTGAGGATGATCGTCCTGGCCGGGTGGCTATTCATCCGGGGCTAGCTGAT
CTATGTGGTATCGATGACATGACCACCGCAAAGACGAGCCCGTATCATGC
GCCAGCACGAATACTGACAGGACTGCTGTCGCTGGAGCGAGGAGTCCGGA
GCTTTGCACCGTACACGGGATTCATGGGGAGACTGCTACCTGAGTTCTTT
GCTAAGTTGATGCAGAAAGATCCACCGGCATTGATACTGCTGACCTACAC
CCCTCACCCAAACATCCGAGACCTAAACGAAAAGACCCTCGCCCTGCACC
TCCGCGACCCGCCCATCTCTTCATCCTCCTACAATACCACCAACAGCAAC
AATTCCTTCCCCCTCGACGAAAAACACCCCTACACTACCACCACCCCACA
AACATCAGAGAATAATGCTGCTGCAACAACAGCAGATGACGCATCCTCTC
AAATCTCCTTCCCTAGCACAACCCACAGCTACGGGAACACCTCCACCGCG
ACGAGAGAGACGCCTCCTCCGCCGTATTCGCCGACGTGGAGGGGCCATGC
AGAGGGGGAGGTCGAGGGGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | Fungal Zn(2)-Cys(6) binuclear cluster domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000004.1 | supercontig | NKJJ01000004.1:2183647..2185830 + |
|
