|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000007.1:941671..943392+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_34380-T1 ID=CAN33_34380-T1|Name=CAN33_34380-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1722bp|location=Sequence derived from alignment at NKJJ01000007.1:941671..943392+ (Aspergillus niger FDAARGOS_311)
ATGACTAGAGAAACAGTCCAAGCTATTCCGGCAAGCGAGGAGTACTACGA
CCTTGGCTCCTACGGTCATGTTATCAGCACCACCAGCCCCGACACCCAGA
CCTGGTTCAACCGGGGTCTGACATGGGTCTACGCCTTCAACCACGTAGAG
GGGGCCTACTGCTTCGAACAAGCCATTGCAAATGATCCGACATGTCCGAT
GGCATACTGGGGGCTCGCCTATGCCGTAGGTCCGAACTACAATAAGCCCT
GGGAGAAGTTCGACAAGAGAGACCTACATGCATGCGTACAACGAGGCTTT
GATGCCGCACAGAAGGCCAAGGAACATGCCGGGAATGCAACACCCCTGGA
ACAGGCTCTCATCGAAGCAATCCAATCACGTTTCGTCGCCAACACCCCGC
CTAACGATTACCCGACCATCAACAAGGGCTACGCCGCCGCCATGAAGCTC
GTTTACGACGCTTTCGGAGATGACATCGACGTGGCCACGCTCTACGCCGA
CGCCTTGATGAACATGACTCCTTGGGCTCTGTGGGATCTCTTCACCGGGA
AGCCGAATCCTAGCGCACCTACGATGGAAGTGAAAGCTGTTCTAGACCGA
GCGCTTACTTTTGAGAATGCAAACCTCCATCCCGGCCTGCTTCACCTCTA
TATCCACTATATCGAGATGTCACCCACCCCAGAACTAGGTATAAATGTGG
CTGATAACCTCCGCAACCTTGTCCCGGATGCCGGTCATATCCACCACATG
CCTACCCATCTTGATATCCTTATTGGAGACTGGAGGCGTTCCATTGCCTC
AAATTACAACTCGACCCTTGCAGACGATAAATACTTCCGCAAGGAAGGAG
CTGCTAACTTCTACACCTTCTACCGTATGCATGACTACCACTCCTTGATC
TACGCAGCTATGTTTGCCGGAAAATCTCAAATGGCACTCGACGCAGTCAC
ACGCATGGAAGCCACCGTTCCCGAGGAGGTCCTCCGGATCCAGTCCCCGC
CTATGGCTGACTGGCTCGAGCAATTCCTAACTAGTCGGCTGCATGTAATG
GTGCGCTTTGGCATGTGGGAGGAGCTAAAACATAAAGAGCTACCCGCTGA
TCAAACTCTCTACTCTGGTACCACTGCCATGACGCACTACGCGCGAGGAG
TCGCCTTCGCAGCCACCGGGGACGTCCCCACAGCTAGGAAAGAACAGGAA
CGGTTCCATCAGGCATGGAAGCGGGTTCCAGAAACCCGTCTCGCCTATAA
CGGGAAGCTTGTCGACGTGCTCCAGGTGGCTGCGGCCATGTTGGAGGGGG
AGATCGAGTATCGGTGCGCGAACTACGATCAGGCCTTCGCTTCGCTGCGT
CGTGCTATTGACATCGAGGATAAGTTGCCCTACAGTGAGCCGTGGTCGTG
GATGCAGCCGTCTCGTCATGCGTACGCGGCTCTTCTGATGGAACAGGGCC
ATTTGGAGGAAGCGGCGCAGACGTATCGTGCGGATCTGGGGCTGGACAAC
ACGCTTGTGCGTCAGTGCCGCCATCCTAACAACGTCTGGTCGCTGCAGGG
GTATCATGAATGCTTAGTGCGGCTGGGAAAGATTGATGAAGCGGCTATGA
TTGAGCAGTCGGTTAAGTTGGCTCTTGCGGTGGCGGATATCCCCATCAAG
GCGTCATGTTTCTGCAGACTGGATACTTCGCAGGCGCCGCAGGTTCTTGA
AGGATGTTGTTCTAAGGAGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000007.1:941671..943392+ >CAN33_34380-T1 ID=CAN33_34380-T1|Name=CAN33_34380-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1722bp|location=Sequence derived from alignment at NKJJ01000007.1:941671..943392+ (Aspergillus niger FDAARGOS_311)
ATGACTAGAGAAACAGTCCAAGCTATTCCGGCAAGCGAGGAGTACTACGA
CCTTGGCTCCTACGGTCATGTTATCAGCACCACCAGCCCCGACACCCAGA
CCTGGTTCAACCGGGGTCTGACATGGGTCTACGCCTTCAACCACGTAGAG
GGGGCCTACTGCTTCGAACAAGCCATTGCAAATGATCCGACATGTCCGAT
GGCATACTGGGGGCTCGCCTATGCCGTAGGTCCGAACTACAATAAGCCCT
GGGAGAAGTTCGACAAGAGAGACCTACATGCATGCGTACAACGAGGCTTT
GATGCCGCACAGAAGGCCAAGGAACATGCCGGGAATGCAACACCCCTGGA
ACAGGCTCTCATCGAAGCAATCCAATCACGTTTCGTCGCCAACACCCCGC
CTAACGATTACCCGACCATCAACAAGGGCTACGCCGCCGCCATGAAGCTC
GTTTACGACGCTTTCGGAGATGACATCGACGTGGCCACGCTCTACGCCGA
CGCCTTGATGAACATGACTCCTTGGGCTCTGTGGGATCTCTTCACCGGGA
AGCCGAATCCTAGCGCACCTACGATGGAAGTGAAAGCTGTTCTAGACCGA
GCGCTTACTTTTGAGAATGCAAACCTCCATCCCGGCCTGCTTCACCTCTA
TATCCACTATATCGAGATGTCACCCACCCCAGAACTAGGTATAAATGTGG
CTGATAACCTCCGCAACCTTGTCCCGGATGCCGGTCATATCCACCACATG
CCTACCCATCTTGATATCCTTATTGGAGACTGGAGGCGTTCCATTGCCTC
AAATTACAACTCGACCCTTGCAGACGATAAATACTTCCGCAAGGAAGGAG
CTGCTAACTTCTACACCTTCTACCGTATGCATGACTACCACTCCTTGATC
TACGCAGCTATGTTTGCCGGAAAATCTCAAATGGCACTCGACGCAGTCAC
ACGCATGGAAGCCACCGTTCCCGAGGAGGTCCTCCGGATCCAGTCCCCGC
CTATGGCTGACTGGCTCGAGCAATTCCTAACTAGTCGGCTGCATGTAATG
GTGCGCTTTGGCATGTGGGAGGAGCTAAAACATAAAGAGCTACCCGCTGA
TCAAACTCTCTACTCTGGTACCACTGCCATGACGCACTACGCGCGAGGAG
TCGCCTTCGCAGCCACCGGGGACGTCCCCACAGCTAGGAAAGAACAGGAA
CGGTTCCATCAGGCATGGAAGCGGGTTCCAGAAACCCGTCTCGCCTATAA
CGGGAAGCTTGTCGACGTGCTCCAGGTGGCTGCGGCCATGTTGGAGGGGG
AGATCGAGTATCGGTGCGCGAACTACGATCAGGCCTTCGCTTCGCTGCGT
CGTGCTATTGACATCGAGGATAAGTTGCCCTACAGTGAGCCGTGGTCGTG
GATGCAGCCGTCTCGTCATGCGTACGCGGCTCTTCTGATGGAACAGGGCC
ATTTGGAGGAAGCGGCGCAGACGTATCGTGCGGATCTGGGGCTGGACAAC
ACGCTTGTGCGTCAGTGCCGCCATCCTAACAACGTCTGGTCGCTGCAGGG
GTATCATGAATGCTTAGTGCGGCTGGGAAAGATTGATGAAGCGGCTATGA
TTGAGCAGTCGGTTAAGTTGGCTCTTGCGGTGGCGGATATCCCCATCAAG
GCGTCATGTTTCTGCAGACTGGATACTTCGCAGGCGCCGCAGGTTCTTGA
AGGATGTTGTTCTAAGGAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR011990 |
| Product | Tetratricopeptide repeat family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000007.1 | supercontig | NKJJ01000007.1:941671..943392 + |
|
