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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000007.1:1282582..1283210+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_34970-T1 ID=CAN33_34970-T1|Name=CAN33_34970-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=629bp|location=Sequence derived from alignment at NKJJ01000007.1:1282582..1283210+ (Aspergillus niger FDAARGOS_311)
ATGGCGTTGCCAAAGAGAATTATAAAGGAGACTGAGCGTCTCATGGCTGA
GCCGTGAGTAGTTCTGCTCTACACAATAATACTATCAAGATAGAGATTGT
TGACGCATGTCCGCAGAGTTCCTGGCATCAACGCCGTACCTCACGAAGAT
AACTTGCGTTACTTCGATGTCTCCATTCACGGACCGGCACAGTCTCCGTA
CGAAGGTAAAAAGGGAGCATACACAGGCTGTTTGTATGGCTGTTGACTTC
TTTCAAGGTGGCATTTTCCGCCTCGAGCTGTTTTTGCCAGAGGACTACCC
GATGACTCCGCCCAAGATTCGCTTTTTGACTAAGATCTATCATCCCAACA
TCGACCGCCTGGGGCGGATTTGTTTGGACGTCTTGAAGAGTATGCGCTAC
TACTGATCTACTTGGGAAAGAAGATACAAGAATCTGGGCTAACGTGTGAC
TAGATAACTGGTCTCCCGCTTTGCAAATTCGCACGATCCTTCTCTCTATT
CAGGCTCTGCTGGGAGCTCCCAACCCGGATGACCCCCTTGCAAATGATGT
TGCTCAACGCTGGAAGGAGGATGAGCCAGCAGCGATACAGACTGCCAAGG
AATGGACTAGAACCCATGCGATGACTTAG back to topCoding sequence (CDS) from alignment at NKJJ01000007.1:1282582..1283210+ >CAN33_34970-T1 ID=CAN33_34970-T1|Name=CAN33_34970-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1800bp|location=Sequence derived from alignment at NKJJ01000007.1:1282582..1283210+ (Aspergillus niger FDAARGOS_311)
ATGGCGTTGCCAAAGAGAATTATAAAGGAGACTGAGCGTCTCATGGCTGA
GCCAGTTCCTGGCATCAACGCCGTACCTCACGAAGATAACTTGCGTTACT
TCGATGTCTCCATTCACGGACCGGCACAGTCTCCGTACGAAGGTGGCATT
TTCCGCCTCGAGCTGTTTTTGCCAGAGGACTACCCGATGACTCCGCCCAA
GATTCGCTTTTTGACTAAGATCTATCATCCCAACATCGACCGCCTGGGGC
GGATTTGTTTGGACGTCTTGAAGAATAACTGGTCTCCCGCTTTGCAAATT
CGCACGATCCTTCTCTCTATTCAGGCTCTGCTGGGAGCTCCCAACCCGGA
TGACCCCCTTGCAAATGATGTTGCTCAACGCTGGAAGGAGGATGAGCCAG
CAGCGATACAGACTGCCAAGGAATGGACTAGAACCCATGCGATGACTTAG
ATGGCGTTGCCAAAGAGAATTATAAAGGAGACTGAGCGTCTCATGGCTGA
GCCAGTTCCTGGCATCAACGCCGTACCTCACGAAGATAACTTGCGTTACT
TCGATGTCTCCATTCACGGACCGGCACAGTCTCCGTACGAAGGTGGCATT
TTCCGCCTCGAGCTGTTTTTGCCAGAGGACTACCCGATGACTCCGCCCAA
GATTCGCTTTTTGACTAAGATCTATCATCCCAACATCGACCGCCTGGGGC
GGATTTGTTTGGACGTCTTGAAGAATAACTGGTCTCCCGCTTTGCAAATT
CGCACGATCCTTCTCTCTATTCAGGCTCTGCTGGGAGCTCCCAACCCGGA
TGACCCCCTTGCAAATGATGTTGCTCAACGCTGGAAGGAGGATGAGCCAG
CAGCGATACAGACTGCCAAGGAATGGACTAGAACCCATGCGATGACTTAG
ATGGCGTTGCCAAAGAGAATTATAAAGGAGACTGAGCGTCTCATGGCTGA
GCCAGTTCCTGGCATCAACGCCGTACCTCACGAAGATAACTTGCGTTACT
TCGATGTCTCCATTCACGGACCGGCACAGTCTCCGTACGAAGGTGGCATT
TTCCGCCTCGAGCTGTTTTTGCCAGAGGACTACCCGATGACTCCGCCCAA
GATTCGCTTTTTGACTAAGATCTATCATCCCAACATCGACCGCCTGGGGC
GGATTTGTTTGGACGTCTTGAAGAATAACTGGTCTCCCGCTTTGCAAATT
CGCACGATCCTTCTCTCTATTCAGGCTCTGCTGGGAGCTCCCAACCCGGA
TGACCCCCTTGCAAATGATGTTGCTCAACGCTGGAAGGAGGATGAGCCAG
CAGCGATACAGACTGCCAAGGAATGGACTAGAACCCATGCGATGACTTAG
ATGGCGTTGCCAAAGAGAATTATAAAGGAGACTGAGCGTCTCATGGCTGA
GCCAGTTCCTGGCATCAACGCCGTACCTCACGAAGATAACTTGCGTTACT
TCGATGTCTCCATTCACGGACCGGCACAGTCTCCGTACGAAGGTGGCATT
TTCCGCCTCGAGCTGTTTTTGCCAGAGGACTACCCGATGACTCCGCCCAA
GATTCGCTTTTTGACTAAGATCTATCATCCCAACATCGACCGCCTGGGGC
GGATTTGTTTGGACGTCTTGAAGAATAACTGGTCTCCCGCTTTGCAAATT
CGCACGATCCTTCTCTCTATTCAGGCTCTGCTGGGAGCTCCCAACCCGGA
TGACCCCCTTGCAAATGATGTTGCTCAACGCTGGAAGGAGGATGAGCCAG
CAGCGATACAGACTGCCAAGGAATGGACTAGAACCCATGCGATGACTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR023313 |
| DBxref | InterPro:IPR016135 |
| DBxref | InterPro:IPR000608 |
| DBxref | PFAM:PF00179 |
| Product | Ubiquitin-conjugating enzyme family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000007.1 | supercontig | NKJJ01000007.1:1282582..1283210 + |
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