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CAN33_35370-T1, CAN33_35370-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_35370-T1
Unique NameCAN33_35370-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000007.1:1588886..1590180+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_35370-T1 ID=CAN33_35370-T1|Name=CAN33_35370-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1295bp|location=Sequence derived from alignment at NKJJ01000007.1:1588886..1590180+ (Aspergillus niger FDAARGOS_311)
ATGGGGACGGCGCTCGATGCGCTGAACCACCAGCCGTTGAACTCGCGTCG
TCCTGCGGCCCCGACTTTACCCAGCTTTGAGCTTCCTGCACCCAACTTCC
AGACCAGCGTCAAGTACGCCCATCACAATCCTCCGCCATCAACCCCAGCG
TCAGCAACCTTCTTACACCACCAGCAACCACCCAATCTGGCGAAACTCTT
CCTGCTACGACCTCGCACACAGCCACCACCACGGCACCCACAAATCCGGA
GTTGGCACCGTACTGGCAGAGCCAGAGCGCATACCAGAGTGGGTCAGGGG
CAGCAGCTGCCCGTCAGTCGTGGAACTCAAGTGTGGTGTCCTATCCAAGT
CGAGACACCTTCTCCCCGTCGGTGAACTCCCTGAATCGCAATCCTGCCAC
GTCGACTCCAGGCACCGAGCATATCACCCAGCCATACGAGATGAATCATT
TGCCTCCGTTTCACCAATCTGCCTCGGTCTCCACTACTGCACCTGTTCAG
GCGGGTGCTCCTCAACAACATCATGCCATGACACACGCAATGTTGTCAGC
ACATAACCCGTTGCCTAATCCAGCGCCGTCGCCGCATCCTCTTCCTTCGA
ACGACCCCTACATGGTCAAATCATCGTCTGCCCCAGCGTATGGCACTATC
CAGCAACTGGCCAGCCCGCCGGGCGGCTATTCGCCGTACGGACAACAGGG
AATCGTGCCCAATCGGGTGGCATCAAATCCGCACCCCTCGCACCACTTGA
ATTATCAACGGCAGCCATGGCCGTCATATTCGCTTCCGGCGGTGAACGGA
CCCATCTGGACGAATGTGCACAATCCGAACGGGCAGATGTCACTTACCGG
AAACCTGCAGTCCGGGGTGCTGCCTGGATTGCCTGGGTACAACAGTGGGC
ACGTGGCCAATATGCAGCAGATGCAGCAGTTGTATGGGGGTCACCCACCC
CATCCAGGTCACGGCGCTCCCGGACCCACCAACGATCGACCGTTCAAGTG
TGACCAGTGTCCACAAAGCTTCAACCGCAACCATGACTTGAAGCGGCATA
AGCGAATTCACCTCTCGGTGAAGCCGTTCCCGTGCACCCACTGTGACAAG
AGCTTTTCGCGCAAGGACGCGCTAAAGGTGAGATTCTTACTTACATTCTG
CGTACAAATGATCGGGTCTAACATGTGTGTACAGCGACACATCCTTGTGA
AAGGCTGCGGAAAAGACGGCTCTGATGGCCTGAAGCCAGGGGAGCACGGA
GTGAAGGAGGAGGACCGAAGTGACGAATCGAATGGACAGCACTGA
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Coding sequence (CDS) from alignment at NKJJ01000007.1:1588886..1590180+

>CAN33_35370-T1 ID=CAN33_35370-T1|Name=CAN33_35370-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3609bp|location=Sequence derived from alignment at NKJJ01000007.1:1588886..1590180+ (Aspergillus niger FDAARGOS_311)
ATGGGGACGGCGCTCGATGCGCTGAACCACCAGCCGTTGAACTCGCGTCG
TCCTGCGGCCCCGACTTTACCCAGCTTTGAGCTTCCTGCACCCAACTTCC
AGACCAGCGTCAACGTCAGCAACCTTCTTACACCACCAGCAACCACCCAA
TCTGGCGAAACTCTTCCTGCTACGACCTCGCACACAGCCACCACCACGGC
ACCCACAAATCCGGAGTTGGCACCGTACTGGCAGAGCCAGAGCGCATACC
AGAGTGGGTCAGGGGCAGCAGCTGCCCGTCAGTCGTGGAACTCAAGTGTG
GTGTCCTATCCAAGTCGAGACACCTTCTCCCCGTCGGTGAACTCCCTGAA
TCGCAATCCTGCCACGTCGACTCCAGGCACCGAGCATATCACCCAGCCAT
ACGAGATGAATCATTTGCCTCCGTTTCACCAATCTGCCTCGGTCTCCACT
ACTGCACCTGTTCAGGCGGGTGCTCCTCAACAACATCATGCCATGACACA
CGCAATGTTGTCAGCACATAACCCGTTGCCTAATCCAGCGCCGTCGCCGC
ATCCTCTTCCTTCGAACGACCCCTACATGGTCAAATCATCGTCTGCCCCA
GCGTATGGCACTATCCAGCAACTGGCCAGCCCGCCGGGCGGCTATTCGCC
GTACGGACAACAGGGAATCGTGCCCAATCGGGTGGCATCAAATCCGCACC
CCTCGCACCACTTGAATTATCAACGGCAGCCATGGCCGTCATATTCGCTT
CCGGCGGTGAACGGACCCATCTGGACGAATGTGCACAATCCGAACGGGCA
GATGTCACTTACCGGAAACCTGCAGTCCGGGGTGCTGCCTGGATTGCCTG
GGTACAACAGTGGGCACGTGGCCAATATGCAGCAGATGCAGCAGTTGTAT
GGGGGTCACCCACCCCATCCAGGTCACGGCGCTCCCGGACCCACCAACGA
TCGACCGTTCAAGTGTGACCAGTGTCCACAAAGCTTCAACCGCAACCATG
ACTTGAAGCGGCATAAGCGAATTCACCTCTCGGTGAAGCCGTTCCCGTGC
ACCCACTGTGACAAGAGCTTTTCGCGCAAGGACGCGCTAAAGCGACACAT
CCTTGTGAAAGGCTGCGGAAAAGACGGCTCTGATGGCCTGAAGCCAGGGG
AGCACGGAGTGAAGGAGGAGGACCGAAGTGACGAATCGAATGGACAGCAC
TGAATGGGGACGGCGCTCGATGCGCTGAACCACCAGCCGTTGAACTCGCG
TCGTCCTGCGGCCCCGACTTTACCCAGCTTTGAGCTTCCTGCACCCAACT
TCCAGACCAGCGTCAACGTCAGCAACCTTCTTACACCACCAGCAACCACC
CAATCTGGCGAAACTCTTCCTGCTACGACCTCGCACACAGCCACCACCAC
GGCACCCACAAATCCGGAGTTGGCACCGTACTGGCAGAGCCAGAGCGCAT
ACCAGAGTGGGTCAGGGGCAGCAGCTGCCCGTCAGTCGTGGAACTCAAGT
GTGGTGTCCTATCCAAGTCGAGACACCTTCTCCCCGTCGGTGAACTCCCT
GAATCGCAATCCTGCCACGTCGACTCCAGGCACCGAGCATATCACCCAGC
CATACGAGATGAATCATTTGCCTCCGTTTCACCAATCTGCCTCGGTCTCC
ACTACTGCACCTGTTCAGGCGGGTGCTCCTCAACAACATCATGCCATGAC
ACACGCAATGTTGTCAGCACATAACCCGTTGCCTAATCCAGCGCCGTCGC
CGCATCCTCTTCCTTCGAACGACCCCTACATGGTCAAATCATCGTCTGCC
CCAGCGTATGGCACTATCCAGCAACTGGCCAGCCCGCCGGGCGGCTATTC
GCCGTACGGACAACAGGGAATCGTGCCCAATCGGGTGGCATCAAATCCGC
ACCCCTCGCACCACTTGAATTATCAACGGCAGCCATGGCCGTCATATTCG
CTTCCGGCGGTGAACGGACCCATCTGGACGAATGTGCACAATCCGAACGG
GCAGATGTCACTTACCGGAAACCTGCAGTCCGGGGTGCTGCCTGGATTGC
CTGGGTACAACAGTGGGCACGTGGCCAATATGCAGCAGATGCAGCAGTTG
TATGGGGGTCACCCACCCCATCCAGGTCACGGCGCTCCCGGACCCACCAA
CGATCGACCGTTCAAGTGTGACCAGTGTCCACAAAGCTTCAACCGCAACC
ATGACTTGAAGCGGCATAAGCGAATTCACCTCTCGGTGAAGCCGTTCCCG
TGCACCCACTGTGACAAGAGCTTTTCGCGCAAGGACGCGCTAAAGCGACA
CATCCTTGTGAAAGGCTGCGGAAAAGACGGCTCTGATGGCCTGAAGCCAG
GGGAGCACGGAGTGAAGGAGGAGGACCGAAGTGACGAATCGAATGGACAG
CACTGAATGGGGACGGCGCTCGATGCGCTGAACCACCAGCCGTTGAACTC
GCGTCGTCCTGCGGCCCCGACTTTACCCAGCTTTGAGCTTCCTGCACCCA
ACTTCCAGACCAGCGTCAACGTCAGCAACCTTCTTACACCACCAGCAACC
ACCCAATCTGGCGAAACTCTTCCTGCTACGACCTCGCACACAGCCACCAC
CACGGCACCCACAAATCCGGAGTTGGCACCGTACTGGCAGAGCCAGAGCG
CATACCAGAGTGGGTCAGGGGCAGCAGCTGCCCGTCAGTCGTGGAACTCA
AGTGTGGTGTCCTATCCAAGTCGAGACACCTTCTCCCCGTCGGTGAACTC
CCTGAATCGCAATCCTGCCACGTCGACTCCAGGCACCGAGCATATCACCC
AGCCATACGAGATGAATCATTTGCCTCCGTTTCACCAATCTGCCTCGGTC
TCCACTACTGCACCTGTTCAGGCGGGTGCTCCTCAACAACATCATGCCAT
GACACACGCAATGTTGTCAGCACATAACCCGTTGCCTAATCCAGCGCCGT
CGCCGCATCCTCTTCCTTCGAACGACCCCTACATGGTCAAATCATCGTCT
GCCCCAGCGTATGGCACTATCCAGCAACTGGCCAGCCCGCCGGGCGGCTA
TTCGCCGTACGGACAACAGGGAATCGTGCCCAATCGGGTGGCATCAAATC
CGCACCCCTCGCACCACTTGAATTATCAACGGCAGCCATGGCCGTCATAT
TCGCTTCCGGCGGTGAACGGACCCATCTGGACGAATGTGCACAATCCGAA
CGGGCAGATGTCACTTACCGGAAACCTGCAGTCCGGGGTGCTGCCTGGAT
TGCCTGGGTACAACAGTGGGCACGTGGCCAATATGCAGCAGATGCAGCAG
TTGTATGGGGGTCACCCACCCCATCCAGGTCACGGCGCTCCCGGACCCAC
CAACGATCGACCGTTCAAGTGTGACCAGTGTCCACAAAGCTTCAACCGCA
ACCATGACTTGAAGCGGCATAAGCGAATTCACCTCTCGGTGAAGCCGTTC
CCGTGCACCCACTGTGACAAGAGCTTTTCGCGCAAGGACGCGCTAAAGCG
ACACATCCTTGTGAAAGGCTGCGGAAAAGACGGCTCTGATGGCCTGAAGC
CAGGGGAGCACGGAGTGAAGGAGGAGGACCGAAGTGACGAATCGAATGGA
CAGCACTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_35370CAN33_35370Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_35370-T1.exon1CAN33_35370-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_35370-T1.exon2CAN33_35370-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_35370-T1.exon3CAN33_35370-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_35370-T1.cdsCAN33_35370-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_35370-T1CAN33_35370-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR013087
DBxrefPFAM:PF13894
DBxrefPFAM:PF00096
ProductZinc finger C2H2 type family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000007.1supercontigNKJJ01000007.1:1588886..1590180 +
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