|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000007.1:1765590..1766552- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_35685-T1 ID=CAN33_35685-T1|Name=CAN33_35685-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=963bp|location=Sequence derived from alignment at NKJJ01000007.1:1765590..1766552- (Aspergillus niger FDAARGOS_311)
ATGCCCATTTTCGACGCAACAGCCACCAGCGAACAGGTCATCGAAGCCTT
CAAGTCTAACATCAAAGGCAAGACCTTCGTCATCACCGGCGCCGGCAAGC
CCAGTATCGGCAGCCAGATGGCTACATCTCTAGCCAAAGCCGGGCCATCA
CATATCCTCATTGCCTCACGCACCCTCGGCAAAGTTCATCCAGTGTTGGA
TGAGATCCACGCCATCGACAGCACCATCAAAACTACAGCGGTAGAGGTGG
ACCTGACAGATCATGAATCCGTTCGCCGCGCCGCAGACGAGATTCTCGCT
GCGGCACCCAAGATCGATGTCCTGATCAACAGTGCCGGGGTCATGGCAAT
CAAGAAATACACCCTCGACAAGCAGGGGATAGAGCTACAACTCTCTGCTA
ATCACGTTGGCCACTTCTTACTCACCAACATGCTCATACCGGCTCTCATA
TCTGCTGGATCCGCGCGCGTGGTCAATCTAACCAGCGCCGGGTACCTCGT
CTCGCCATTTCGGTTCGAAGACTGGAACTATTCCAACGGAAAAGAATACG
ACCCGTGGACTGGGTACGGGCAGGCTAAAACAGCCAATATATTATTCACC
TATGGCTTAGGCCAGCGGCTAAAGCATAAGGGAATTGCAGCCGTTGCTGT
TCATCCAGGCTATAATGGAGATACTAAACTTGGCAGTCACCTTACTTGGG
ACGATTACGCTAAGATCTCTGCGGTTGCGATACGGAATACCGGCAAGGAG
TTTGTTTTCGAGGAGCCTCGGTTCAAAACGTATACCCAGATTGCGGCTAC
TCCGTTGATTGCCGCTTTGGATCCGGAGTTGCAGGCTCTGGCGCCGGTGT
ACATGCAGAATAGTGTGGTTAGTGAGGCTGCGGAGCATGCTCGGGATCCT
GCGAGTGTGGATGCTTTGTGGAGGTTGAGTGAGGGGCTTGTTGGGCAGGA
GTTTCGGTATTAG back to topCoding sequence (CDS) from alignment at NKJJ01000007.1:1765590..1766552- >CAN33_35685-T1 ID=CAN33_35685-T1|Name=CAN33_35685-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=963bp|location=Sequence derived from alignment at NKJJ01000007.1:1765590..1766552- (Aspergillus niger FDAARGOS_311)
ATGCCCATTTTCGACGCAACAGCCACCAGCGAACAGGTCATCGAAGCCTT
CAAGTCTAACATCAAAGGCAAGACCTTCGTCATCACCGGCGCCGGCAAGC
CCAGTATCGGCAGCCAGATGGCTACATCTCTAGCCAAAGCCGGGCCATCA
CATATCCTCATTGCCTCACGCACCCTCGGCAAAGTTCATCCAGTGTTGGA
TGAGATCCACGCCATCGACAGCACCATCAAAACTACAGCGGTAGAGGTGG
ACCTGACAGATCATGAATCCGTTCGCCGCGCCGCAGACGAGATTCTCGCT
GCGGCACCCAAGATCGATGTCCTGATCAACAGTGCCGGGGTCATGGCAAT
CAAGAAATACACCCTCGACAAGCAGGGGATAGAGCTACAACTCTCTGCTA
ATCACGTTGGCCACTTCTTACTCACCAACATGCTCATACCGGCTCTCATA
TCTGCTGGATCCGCGCGCGTGGTCAATCTAACCAGCGCCGGGTACCTCGT
CTCGCCATTTCGGTTCGAAGACTGGAACTATTCCAACGGAAAAGAATACG
ACCCGTGGACTGGGTACGGGCAGGCTAAAACAGCCAATATATTATTCACC
TATGGCTTAGGCCAGCGGCTAAAGCATAAGGGAATTGCAGCCGTTGCTGT
TCATCCAGGCTATAATGGAGATACTAAACTTGGCAGTCACCTTACTTGGG
ACGATTACGCTAAGATCTCTGCGGTTGCGATACGGAATACCGGCAAGGAG
TTTGTTTTCGAGGAGCCTCGGTTCAAAACGTATACCCAGATTGCGGCTAC
TCCGTTGATTGCCGCTTTGGATCCGGAGTTGCAGGCTCTGGCGCCGGTGT
ACATGCAGAATAGTGTGGTTAGTGAGGCTGCGGAGCATGCTCGGGATCCT
GCGAGTGTGGATGCTTTGTGGAGGTTGAGTGAGGGGCTTGTTGGGCAGGA
GTTTCGGTATTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000071.3 |
| Note | EggNog:ENOG41 |
| Note | SMCOG1001:short-chain dehydrogenase/reductase SDR |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | putative secondary metabolism biosynthetic enzyme |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000007.1 | supercontig | NKJJ01000007.1:1765590..1766552 - |
|
